Literature DB >> 21643549

Modulation of an n→π* interaction with α-fluoro groups.

Amit Choudhary, Charles G Fry, Ronald T Raines.   

Abstract

Noncovalent interactions play an essential role in biological and chemical processes. In the main chain of common protein secondary structures, the lone pair (n) of a carbonyl oxygen is delocalized into the antibonding orbital (π*) of the subsequent carbonyl group. Herein, experimental and computational data reveal that this n→π* interaction can be attenuated by the inductive electron withdrawal of one or two α-fluoro groups in the donor. The steric effect of three α-fluoro groups, however, overcomes the inductive withdrawal. These data evoke a means to modulate the n→π* interaction in peptides, proteins, and other systems.

Entities:  

Year:  2010        PMID: 21643549      PMCID: PMC3107012     

Source DB:  PubMed          Journal:  ARKIVOC        ISSN: 1551-7004            Impact factor:   1.140


  24 in total

1.  Conformational stability of collagen relies on a stereoelectronic effect.

Authors:  L E Bretscher; C L Jenkins; K M Taylor; M L DeRider; R T Raines
Journal:  J Am Chem Soc       Date:  2001-01-31       Impact factor: 15.419

2.  Stereoelectronic effects on polyproline conformation.

Authors:  Jia-Cherng Horng; Ronald T Raines
Journal:  Protein Sci       Date:  2006-01       Impact factor: 6.725

3.  Local and tunable n-->pi* interactions regulate amide isomerism in the peptoid backbone.

Authors:  Benjamin C Gorske; Brent L Bastian; Grant D Geske; Helen E Blackwell
Journal:  J Am Chem Soc       Date:  2007-07-03       Impact factor: 15.419

4.  Orthogonal dipolar interactions between amide carbonyl groups.

Authors:  Felix R Fischer; Peter A Wood; Frank H Allen; François Diederich
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-03       Impact factor: 11.205

5.  Stereoelectronic and steric effects in side chains preorganize a protein main chain.

Authors:  Matthew D Shoulders; Kenneth A Satyshur; Katrina T Forest; Ronald T Raines
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-31       Impact factor: 11.205

6.  Collagen stability: insights from NMR spectroscopic and hybrid density functional computational investigations of the effect of electronegative substituents on prolyl ring conformations.

Authors:  Michele L DeRider; Steven J Wilkens; Michael J Waddell; Lynn E Bretscher; Frank Weinhold; Ronald T Raines; John L Markley
Journal:  J Am Chem Soc       Date:  2002-03-20       Impact factor: 15.419

7.  The "azido gauche effect"-implications for the conformation of azidoprolines.

Authors:  Louis-Sebastian Sonntag; Sabine Schweizer; Christian Ochsenfeld; Helma Wennemers
Journal:  J Am Chem Soc       Date:  2006-11-15       Impact factor: 15.419

8.  In situ monitoring of backbone thioester exchange by 19F NMR.

Authors:  William C Pomerantz; Erik B Hadley; Charles G Fry; Samuel H Gellman
Journal:  Chembiochem       Date:  2009-09-04       Impact factor: 3.164

9.  Coulombic interactions between partially charged main-chain atoms not hydrogen-bonded to each other influence the conformations of alpha-helices and antiparallel beta-sheet. A new method for analysing the forces between hydrogen bonding groups in proteins includes all the Coulombic interactions.

Authors:  P H Maccallum; R Poet; E J Milner-White
Journal:  J Mol Biol       Date:  1995-04-28       Impact factor: 5.469

10.  Nature of amide carbonyl--carbonyl interactions in proteins.

Authors:  Amit Choudhary; Deepa Gandla; Grant R Krow; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2009-06-03       Impact factor: 15.419

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  10 in total

1.  A conserved interaction with the chromophore of fluorescent proteins.

Authors:  Amit Choudhary; Kimberli J Kamer; Ronald T Raines
Journal:  Protein Sci       Date:  2011-12-21       Impact factor: 6.725

Review 2.  An evaluation of peptide-bond isosteres.

Authors:  Amit Choudhary; Ronald T Raines
Journal:  Chembiochem       Date:  2011-07-12       Impact factor: 3.164

3.  Intimate interactions with carbonyl groups: dipole-dipole or n→π*?

Authors:  Kimberli J Kamer; Amit Choudhary; Ronald T Raines
Journal:  J Org Chem       Date:  2012-12-10       Impact factor: 4.354

4.  Electronic and Steric Control of n→π* Interactions: Stabilization of the α-Helix Conformation without a Hydrogen Bond.

Authors:  Nicole A Wenzell; Himal K Ganguly; Anil K Pandey; Megh R Bhatt; Glenn P A Yap; Neal J Zondlo
Journal:  Chembiochem       Date:  2019-03-07       Impact factor: 3.164

5.  A key n→π* Interaction in N-acyl homoserine lactones.

Authors:  Robert W Newberry; Ronald T Raines
Journal:  ACS Chem Biol       Date:  2014-02-26       Impact factor: 5.100

6.  n→π* interactions engender chirality in carbonyl groups.

Authors:  Amit Choudhary; Robert W Newberry; Ronald T Raines
Journal:  Org Lett       Date:  2014-06-13       Impact factor: 6.005

7.  Synthesis and biological evaluation of novel N-α-haloacylated homoserine lactones as quorum sensing modulators.

Authors:  Michail Syrpas; Ewout Ruysbergh; Christian V Stevens; Norbert De Kimpe; Sven Mangelinckx
Journal:  Beilstein J Org Chem       Date:  2014-10-30       Impact factor: 2.883

8.  The n→π* Interaction.

Authors:  Robert W Newberry; Ronald T Raines
Journal:  Acc Chem Res       Date:  2017-07-23       Impact factor: 22.384

9.  Pyramidalization of a carbonyl C atom in (2S)-N-(seleno-acet-yl)proline methyl ester.

Authors:  Ilia A Guzei; Amit Choudhary; Ronald T Raines
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-04-30

10.  Reciprocal carbonyl-carbonyl interactions in small molecules and proteins.

Authors:  Abdur Rahim; Pinaki Saha; Kunal Kumar Jha; Nagamani Sukumar; Bani Kanta Sarma
Journal:  Nat Commun       Date:  2017-07-19       Impact factor: 14.919

  10 in total

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