Literature DB >> 22607128

Synthesis of 5-fluoro- and 5-hydroxymethanoprolines via lithiation of N-BOC-methanopyrrolidines. Constrained Cγ-exo and Cγ-endo Flp and Hyp conformer mimics.

Grant R Krow1, Matthew D Shoulders, Ramakrishna Edupuganti, Deepa Gandla, Fang Yu, Philip E Sonnet, Matthew Sender, Amit Choudhary, Charles DeBrosse, Charles W Ross, Patrick Carroll, Ronald T Raines.   

Abstract

Proline derivatives with a C(γ)-exo pucker typically display a high amide bond trans/cis (K(T/C)) ratio. This pucker enhances n→π* overlap of the amide oxygen and ester carbonyl carbon, which favors a trans amide bond. If there were no difference in n→π* interaction between the ring puckers, then the correlation between ring pucker and K(T/C) might be broken. To explore this possibility, proline conformations were constrained using a methylene bridge. We synthesized discrete gauche and anti 5-fluoro- and 5-hydroxy-N-acetylmethanoproline methyl esters from 3-syn and 3-anti fluoro- and hydroxymethanopyrrolidines using directed α-metalation to introduce the α-ester group. NBO calculations reveal minimal n→π* orbital interactions, so contributions from other forces might be of greater importance in determining K(T/C) for the methanoprolines. Consistent with this hypothesis, greater trans amide preferences were found in CDCl(3) for anti isomers en-MetFlp and en-MetHyp (72-78% trans) than for the syn stereoisomers ex-MetFlp and ex-MetHyp (54-67% trans). These, and other, K(T/C) results that we report here indicate how substituents on proline analogues can affect amide preferences by pathways other than ring puckering and n→π* overlap and suggest that caution should be exercised in assigning enhanced pyrrolidine C(γ)-exo ring puckering based solely on enhanced trans amide preference.

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Year:  2012        PMID: 22607128      PMCID: PMC3381989          DOI: 10.1021/jo300700a

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  50 in total

Review 1.  The hunchback and its neighbours: proline as an environmental modulator.

Authors:  H Reiersen; A R Rees
Journal:  Trends Biochem Sci       Date:  2001-11       Impact factor: 13.807

2.  Conformational stability of collagen relies on a stereoelectronic effect.

Authors:  L E Bretscher; C L Jenkins; K M Taylor; M L DeRider; R T Raines
Journal:  J Am Chem Soc       Date:  2001-01-31       Impact factor: 15.419

3.  An electronic effect on protein structure.

Authors:  Matthew P Hinderaker; Ronald T Raines
Journal:  Protein Sci       Date:  2003-06       Impact factor: 6.725

4.  Understanding the role of stereoelectronic effects in determining collagen stability. 1. A quantum mechanical study of proline, hydroxyproline, and fluoroproline dipeptide analogues in aqueous solution.

Authors:  R Improta; C Benzi; V Barone
Journal:  J Am Chem Soc       Date:  2001-12-19       Impact factor: 15.419

5.  O-acylation of hydroxyproline residues: effect on peptide-bond isomerization and collagen stability.

Authors:  Cara L Jenkins; Alexander I McCloskey; Ilia A Guzei; Eric S Eberhardt; Ronald T Raines
Journal:  Biopolymers       Date:  2005       Impact factor: 2.505

6.  Collagen stability: insights from NMR spectroscopic and hybrid density functional computational investigations of the effect of electronegative substituents on prolyl ring conformations.

Authors:  Michele L DeRider; Steven J Wilkens; Michael J Waddell; Lynn E Bretscher; Frank Weinhold; Ronald T Raines; John L Markley
Journal:  J Am Chem Soc       Date:  2002-03-20       Impact factor: 15.419

7.  Substituted 2-azabicyclo[2.1.1]hexanes as constrained proline analogues: implications for collagen stability.

Authors:  Cara L Jenkins; Guoliang Lin; Jingqi Duo; Deepa Rapolu; Ilia A Guzei; Ronald T Raines; Grant R Krow
Journal:  J Org Chem       Date:  2004-12-10       Impact factor: 4.354

8.  Complex-induced proximity effects. Temperature-dependent regiochemical diversity in lithiation-electrophilic substitution reactions of N-BOC-2-azabicyclo[2.1.1]hexane. 2,4- and 3,5-methanoprolines.

Authors:  Grant R Krow; Seth B Herzon; Guoliang Lin; Feng Qiu; Philip E Sonnet
Journal:  Org Lett       Date:  2002-09-05       Impact factor: 6.005

9.  Characterization of collagen model peptides containing 4-fluoroproline; (4(S)-fluoroproline-pro-gly)10 forms a triple helix, but (4(R)-fluoroproline-pro-gly)10 does not.

Authors:  Masamitsu Doi; Yoshinori Nishi; Susumu Uchiyama; Yuji Nishiuchi; Takashi Nakazawa; Tadayasu Ohkubo; Yuji Kobayashi
Journal:  J Am Chem Soc       Date:  2003-08-20       Impact factor: 15.419

10.  Stereoelectronic effects on collagen stability: the dichotomy of 4-fluoroproline diastereomers.

Authors:  Jonathan A Hodges; Ronald T Raines
Journal:  J Am Chem Soc       Date:  2003-08-06       Impact factor: 15.419

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  2 in total

1.  Proline editing: a general and practical approach to the synthesis of functionally and structurally diverse peptides. Analysis of steric versus stereoelectronic effects of 4-substituted prolines on conformation within peptides.

Authors:  Anil K Pandey; Devan Naduthambi; Krista M Thomas; Neal J Zondlo
Journal:  J Am Chem Soc       Date:  2013-03-11       Impact factor: 15.419

Review 2.  Synthesis of complex unnatural fluorine-containing amino acids.

Authors:  William D G Brittain; Carissa M Lloyd; Steven L Cobb
Journal:  J Fluor Chem       Date:  2020-11       Impact factor: 2.050

  2 in total

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