Literature DB >> 15695716

Rapid diagnosis of herpes simplex virus infection by a loop-mediated isothermal amplification method.

Yoshihiko Enomoto1, Tetsushi Yoshikawa, Masaru Ihira, Shiho Akimoto, Fumi Miyake, Chie Usui, Sadao Suga, Kayoko Suzuki, Takashi Kawana, Yukihiro Nishiyama, Yoshizo Asano.   

Abstract

Primers for herpes simplex virus type 1 (HSV 1)-specific loop-mediated isothermal amplification (LAMP) method amplified HSV-1 DNA, while HSV-2-specific primers amplified only HSV-2 DNA; no LAMP products were produced by reactions performed with other viral DNAs. The sensitivities of the HSV-1- and HSV-2-specific LAMP methods, determined by agarose gel electrophoresis, reached 500 and 1,000 copies/tube, respectively. The turbidity assay, however, determined the sensitivity of the HSV-1- and HSV-2-specific LAMP methods to be 1,000 and 10,000 copies/tube, respectively. After initial validation studies, 18 swab samples (in sterilized water) collected from patients with either gingivostomatitis or vesicular skin eruptions were examined. HSV-1 LAMP products were detected by agarose gel electrophoresis in the 10 samples that also demonstrated viral DNA detection by real-time PCR. Nine of these 10 samples exhibited HSV-1 LAMP products by turbidity assay. Furthermore, both the agarose gel electrophoresis and the turbidity assay directly detected HSV-1 LAMP products in 9 of the 10 swab samples collected in sterilized water. Next, we examined the reliability of HSV type-specific LAMP for the detection of viral DNA in clinical specimens (culture medium) collected from genital lesions. HSV-2 was isolated from all of the samples and visualized by either agarose gel electrophoresis or turbidity assay.

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Year:  2005        PMID: 15695716      PMCID: PMC548035          DOI: 10.1128/JCM.43.2.951-955.2005

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  23 in total

1.  Real-time reverse transcription loop-mediated isothermal amplification for rapid detection of West Nile virus.

Authors:  Manmohan Parida; Guillermo Posadas; Shingo Inoue; Futoshi Hasebe; Kouichi Morita
Journal:  J Clin Microbiol       Date:  2004-01       Impact factor: 5.948

2.  Accelerated reaction by loop-mediated isothermal amplification using loop primers.

Authors:  K Nagamine; T Hase; T Notomi
Journal:  Mol Cell Probes       Date:  2002-06       Impact factor: 2.365

3.  Diagnosing herpesvirus infections by real-time amplification and rapid culture.

Authors:  G J J van Doornum; J Guldemeester; A D M E Osterhaus; H G M Niesters
Journal:  J Clin Microbiol       Date:  2003-02       Impact factor: 5.948

4.  Loop-mediated isothermal amplification for detection of African trypanosomes.

Authors:  Noritaka Kuboki; Noboru Inoue; Tatsuya Sakurai; Francescopaolo Di Cello; Dennis J Grab; Hiroshi Suzuki; Chihiro Sugimoto; Ikuo Igarashi
Journal:  J Clin Microbiol       Date:  2003-12       Impact factor: 5.948

5.  Detection of human herpesvirus 7 DNA by loop-mediated isothermal amplification.

Authors:  Tetsushi Yoshikawa; Masaru Ihira; Shiho Akimoto; Chie Usui; Fumi Miyake; Sadao Suga; Yoshihiko Enomoto; Ryota Suzuki; Yukihiro Nishiyama; Yoshizo Asano
Journal:  J Clin Microbiol       Date:  2004-03       Impact factor: 5.948

6.  Monitoring herpesvirus DNA in three cases of acute retinal necrosis by real-time PCR.

Authors:  Shinya Asano; Tetsushi Yoshikawa; Hiroshi Kimura; Yoshihiko Enomoto; Masahiro Ohashi; Hiroko Terasaki; Yukihiro Nishiyama
Journal:  J Clin Virol       Date:  2004-03       Impact factor: 3.168

7.  Extended duration of herpes simplex virus DNA in genital lesions detected by the polymerase chain reaction.

Authors:  R W Cone; A C Hobson; J Palmer; M Remington; L Corey
Journal:  J Infect Dis       Date:  1991-10       Impact factor: 5.226

8.  Rapid diagnosis of human herpesvirus 6 infection by a novel DNA amplification method, loop-mediated isothermal amplification.

Authors:  Masaru Ihira; Tetsushi Yoshikawa; Yoshihiko Enomoto; Shiho Akimoto; Masahiro Ohashi; Sadao Suga; Naoko Nishimura; Takao Ozaki; Yukihiro Nishiyama; Tsugunori Notomi; Yoshinori Ohta; Yoshizo Asano
Journal:  J Clin Microbiol       Date:  2004-01       Impact factor: 5.948

9.  Use of loop-mediated isothermal amplification of the IS900 sequence for rapid detection of cultured Mycobacterium avium subsp. paratuberculosis.

Authors:  M Enosawa; S Kageyama; K Sawai; K Watanabe; T Notomi; S Onoe; Y Mori; Y Yokomizo
Journal:  J Clin Microbiol       Date:  2003-09       Impact factor: 5.948

10.  Comparison of washing and swabbing procedures for collecting genital fluids to assess cervicovaginal shedding of herpes simplex virus type 2 DNA.

Authors:  Angélique Ndjoyi-Mbiguino; Francis Ozouaki; Jérôme Legoff; François-Xavier Mbopi-Kéou; Ali Si-Mohamed; Isabelle Ndombi Onas; Evelyne Avoune; Laurent Bélec
Journal:  J Clin Microbiol       Date:  2003-06       Impact factor: 5.948

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  36 in total

1.  Rapid detection of herpes simplex virus DNA in cerebrospinal fluid: comparison between loop-mediated isothermal amplification and real-time PCR.

Authors:  Hiroshi Kimura; Masaru Ihira; Yoshihiro Enomoto; Jun-ichi Kawada; Yoshinori Ito; Tsuneo Morishima; Tetsushi Yoshikawa; Yoshizo Asano
Journal:  Med Microbiol Immunol       Date:  2005-05-21       Impact factor: 3.402

2.  Rapid genome detection of Schmallenberg virus and bovine viral diarrhea virus by use of isothermal amplification methods and high-speed real-time reverse transcriptase PCR.

Authors:  Andrea Aebischer; Kerstin Wernike; Bernd Hoffmann; Martin Beer
Journal:  J Clin Microbiol       Date:  2014-03-19       Impact factor: 5.948

3.  Rapid visual detection of highly pathogenic Streptococcus suis serotype 2 isolates by use of loop-mediated isothermal amplification.

Authors:  Jinhai Zhang; Jing Zhu; Hao Ren; Shiying Zhu; Ping Zhao; Fengyu Zhang; Heng Lv; Dan Hu; Lina Hao; Meiling Geng; Xiufang Gong; Xiuzhen Pan; Changjun Wang; Zhongtian Qi
Journal:  J Clin Microbiol       Date:  2013-07-24       Impact factor: 5.948

4.  Development and evaluation of a loop-mediated isothermal amplification method for rapid diagnosis of Bordetella pertussis infection.

Authors:  Kazunari Kamachi; Hiromi Toyoizumi-Ajisaka; Kohei Toda; Sann Chan Soeung; Svay Sarath; Ya Nareth; Yoshinobu Horiuchi; Kazunobu Kojima; Motohide Takahashi; Yoshichika Arakawa
Journal:  J Clin Microbiol       Date:  2006-05       Impact factor: 5.948

5.  Outbreaks of multidrug-resistant Pseudomonas aeruginosa in community hospitals in Japan.

Authors:  Jun-Ichiro Sekiguchi; Tsukasa Asagi; Tohru Miyoshi-Akiyama; Atsushi Kasai; Yukie Mizuguchi; Minako Araake; Tomoko Fujino; Hideko Kikuchi; Satoru Sasaki; Hajime Watari; Tadashi Kojima; Hiroshi Miki; Keiji Kanemitsu; Hiroyuki Kunishima; Yoshihiro Kikuchi; Mitsuo Kaku; Hiroshi Yoshikura; Tadatoshi Kuratsuji; Teruo Kirikae
Journal:  J Clin Microbiol       Date:  2006-11-22       Impact factor: 5.948

6.  Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Hepatitis C virus.

Authors:  Mohammad Kargar; Ahzam Askari; Abbas Doosti; Sadegh Ghorbani-Dalini
Journal:  Indian J Virol       Date:  2012-03-25

7.  Discriminating between varicella-zoster virus vaccine and wild-type strains by loop-mediated isothermal amplification.

Authors:  Yuki Higashimoto; Masaru Ihira; Akane Ohta; Shigeki Inoue; Chie Usui; Yoshizo Asano; Tetsushi Yoshikawa
Journal:  J Clin Microbiol       Date:  2008-06-11       Impact factor: 5.948

8.  Reverse transcription loop-mediated isothermal amplification assay for rapid detection of Bovine Rotavirus.

Authors:  Zhixun Xie; Qing Fan; Jiabo Liu; Yaoshan Pang; Xianwen Deng; Zhiqin Xie; Xie Liji; Mazhar I Khan
Journal:  BMC Vet Res       Date:  2012-08-15       Impact factor: 2.741

9.  One-Day Molecular Detection of Salmonella and Campylobacter in Chicken Meat: A Pilot Study.

Authors:  Andrea Zendrini; Valentina Carta; Virginia Filipello; Laura Ragni; Elena Cosciani-Cunico; Sara Arnaboldi; Barbara Bertasi; Niccolò Franceschi; Paolo Ajmone-Marsan; Dario De Medici; Marina Nadia Losio
Journal:  Foods       Date:  2021-05-19

10.  Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for detection of Leishmania DNA in buffy coat from visceral leishmaniasis patients.

Authors:  Md Gulam Musawwir Khan; Khondaker Rifat Hasan Bhaskar; Md Abdus Salam; Tania Akther; Gerd Pluschke; Dinesh Mondal
Journal:  Parasit Vectors       Date:  2012-12-03       Impact factor: 3.876

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