Literature DB >> 14715744

Rapid diagnosis of human herpesvirus 6 infection by a novel DNA amplification method, loop-mediated isothermal amplification.

Masaru Ihira1, Tetsushi Yoshikawa, Yoshihiko Enomoto, Shiho Akimoto, Masahiro Ohashi, Sadao Suga, Naoko Nishimura, Takao Ozaki, Yukihiro Nishiyama, Tsugunori Notomi, Yoshinori Ohta, Yoshizo Asano.   

Abstract

A novel nucleic acid amplification method, termed loop-mediated isothermal amplification (LAMP), which amplifies DNA with high specificity, efficiency, and rapidity under isothermal conditions, may be a valuable tool for the rapid detection of infectious agents. LAMP was developed for human herpesvirus 6 (HHV-6), and its reliability was evaluated in this study. Although LAMP products were detected in HHV-6 B and HHV-6 A DNA, they were not detected in HHV-7 and human cytomegalovirus DNA. The sensitivity of the original HHV-6 LAMP protocol was 50 copies/tube. In order to increase the method's sensitivity, HHV-6 LAMP was modified by increasing the primer concentration. As a result of the modification, sensitivity increased to 25 copies/tube. After these initial validation studies, 13 patients with fever were tested for HHV-6 by viral isolation, serological analysis, and HHV-6 LAMP. In three of the eight patients with primary HHV-6 infection, HHV-6 DNA was detected in whole blood by the original HHV-6 LAMP protocol in not only the acute phase but also the convalescent phase. HHV-6 DNA was detected by modified HHV-6 LAMP in all eight plasma samples collected in the acute phase; however, no HHV-6 DNA was detected in plasma samples collected in the convalescent phase. Although HHV-6 DNA was detected in both the acute and convalescent phases of whole-blood samples in patients with past HHV-6 infection, it was not detected in plasma samples that did not contain latent viral DNA. Thus, detection of HHV-6 DNA in plasma by using this modified HHV-6 LAMP protocol is appropriate for diagnosis of active HHV-6 infection.

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Year:  2004        PMID: 14715744      PMCID: PMC321673          DOI: 10.1128/JCM.42.1.140-145.2004

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  31 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Brief report: fatal encephalitis due to variant B human herpesvirus-6 infection in a bone marrow-transplant recipient.

Authors:  W R Drobyski; K K Knox; D Majewski; D R Carrigan
Journal:  N Engl J Med       Date:  1994-05-12       Impact factor: 91.245

3.  Human herpesvirus-6 infection in children. A prospective study of complications and reactivation.

Authors:  C B Hall; C E Long; K C Schnabel; M T Caserta; K M McIntyre; M A Costanzo; A Knott; S Dewhurst; R A Insel; L G Epstein
Journal:  N Engl J Med       Date:  1994-08-18       Impact factor: 91.245

4.  Fatal encephalitis/encephalopathy in primary human herpesvirus-6 infection.

Authors:  Y Asano; T Yoshikawa; Y Kajita; R Ogura; S Suga; T Yazaki; T Nakashima; A Yamada; T Kurata
Journal:  Arch Dis Child       Date:  1992-12       Impact factor: 3.791

5.  Human herpesvirus 6 in lung tissue from patients with pneumonitis after bone marrow transplantation.

Authors:  R W Cone; R C Hackman; M L Huang; R A Bowden; J D Meyers; M Metcalf; J Zeh; R Ashley; L Corey
Journal:  N Engl J Med       Date:  1993-07-15       Impact factor: 91.245

6.  Human herpesvirus 6 (HHV-6) isolation from bone marrow: HHV-6-associated bone marrow suppression in bone marrow transplant patients.

Authors:  D R Carrigan; K K Knox
Journal:  Blood       Date:  1994-11-15       Impact factor: 22.113

7.  Human herpesvirus-6 (HHV-6) infection in allogeneic bone marrow transplant recipients: evidence of a marrow-suppressive role for HHV-6 in vivo.

Authors:  W R Drobyski; W M Dunne; E M Burd; K K Knox; R C Ash; M M Horowitz; N Flomenberg; D R Carrigan
Journal:  J Infect Dis       Date:  1993-03       Impact factor: 5.226

8.  Clinical and virological analyses of 21 infants with exanthem subitum (roseola infantum) and central nervous system complications.

Authors:  S Suga; T Yoshikawa; Y Asano; T Kozawa; T Nakashima; I Kobayashi; T Yazaki; H Yamamoto; Y Kajita; T Ozaki
Journal:  Ann Neurol       Date:  1993-06       Impact factor: 10.422

9.  Detection of human herpesvirus 6 in plasma of children with primary infection and immunosuppressed patients by polymerase chain reaction.

Authors:  P Secchiero; D R Carrigan; Y Asano; L Benedetti; R W Crowley; A L Komaroff; R C Gallo; P Lusso
Journal:  J Infect Dis       Date:  1995-02       Impact factor: 5.226

10.  Prospective study of persistence and excretion of human herpesvirus-6 in patients with exanthem subitum and their parents.

Authors:  S Suga; T Yoshikawa; Y Kajita; T Ozaki; Y Asano
Journal:  Pediatrics       Date:  1998-10       Impact factor: 7.124

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  30 in total

1.  Sensitive and rapid detection of the new Delhi metallo-beta-lactamase gene by loop-mediated isothermal amplification.

Authors:  Wei Liu; Dayang Zou; Yan Li; Xuesong Wang; Xiang He; Xiao Wei; Changlin Shao; Xuelian Li; Wei Shang; Kaitao Yu; Dawei Liu; Yunmei Li; Jing Guo; Zhitao Yin; Jing Yuan
Journal:  J Clin Microbiol       Date:  2012-02-22       Impact factor: 5.948

2.  Rapid detection of herpes simplex virus DNA in cerebrospinal fluid: comparison between loop-mediated isothermal amplification and real-time PCR.

Authors:  Hiroshi Kimura; Masaru Ihira; Yoshihiro Enomoto; Jun-ichi Kawada; Yoshinori Ito; Tsuneo Morishima; Tetsushi Yoshikawa; Yoshizo Asano
Journal:  Med Microbiol Immunol       Date:  2005-05-21       Impact factor: 3.402

3.  Development and evaluation of a real-time reverse transcription-loop-mediated isothermal amplification assay for rapid detection of Rift Valley fever virus in clinical specimens.

Authors:  C A Le Roux; T Kubo; A A Grobbelaar; P Jansen van Vuren; J Weyer; L H Nel; R Swanepoel; K Morita; J T Paweska
Journal:  J Clin Microbiol       Date:  2008-12-24       Impact factor: 5.948

4.  Rapid diagnostic method for detection of mumps virus genome by loop-mediated isothermal amplification.

Authors:  Takao Okafuji; Naoko Yoshida; Motoko Fujino; Yoshie Motegi; Toshiaki Ihara; Yoshinori Ota; Tsugunori Notomi; Tetsuo Nakayama
Journal:  J Clin Microbiol       Date:  2005-04       Impact factor: 5.948

5.  Sensitive and rapid detection of herpes simplex virus and varicella-zoster virus DNA by loop-mediated isothermal amplification.

Authors:  Hisatoshi Kaneko; Tomohiro Iida; Koki Aoki; Shigeaki Ohno; Tatsuo Suzutani
Journal:  J Clin Microbiol       Date:  2005-07       Impact factor: 5.948

6.  Rapid diagnosis of Tetracapsuloides bryosalmonae, the causative agent of proliferative kidney disease (PKD) in salmonid fish by a novel DNA amplification method, loop-mediated isothermal amplification (LAMP).

Authors:  Mansour El-Matbouli; Hatem Soliman
Journal:  Parasitol Res       Date:  2005-05-14       Impact factor: 2.289

7.  Loop-Mediated Isothermal Amplification Assay for Rapid Detection of Hepatitis C virus.

Authors:  Mohammad Kargar; Ahzam Askari; Abbas Doosti; Sadegh Ghorbani-Dalini
Journal:  Indian J Virol       Date:  2012-03-25

8.  Direct loop-mediated isothermal amplification assay for on-site detection of Staphylococcus aureus.

Authors:  Xiaolan Tian; Junli Feng; Yi Wang
Journal:  FEMS Microbiol Lett       Date:  2018-06-01       Impact factor: 2.742

9.  Discriminating between varicella-zoster virus vaccine and wild-type strains by loop-mediated isothermal amplification.

Authors:  Yuki Higashimoto; Masaru Ihira; Akane Ohta; Shigeki Inoue; Chie Usui; Yoshizo Asano; Tetsushi Yoshikawa
Journal:  J Clin Microbiol       Date:  2008-06-11       Impact factor: 5.948

10.  Multicenter comparison of PCR assays for detection of human herpesvirus 6 DNA in serum.

Authors:  Louis Flamand; Annie Gravel; David Boutolleau; Roberto Alvarez-Lafuente; Steve Jacobson; Mauro S Malnati; Debra Kohn; Yi-Wei Tang; Tetsushi Yoshikawa; Dharam Ablashi
Journal:  J Clin Microbiol       Date:  2008-06-11       Impact factor: 5.948

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