Literature DB >> 15004116

Detection of human herpesvirus 7 DNA by loop-mediated isothermal amplification.

Tetsushi Yoshikawa1, Masaru Ihira, Shiho Akimoto, Chie Usui, Fumi Miyake, Sadao Suga, Yoshihiko Enomoto, Ryota Suzuki, Yukihiro Nishiyama, Yoshizo Asano.   

Abstract

The reliability of loop-mediated isothermal amplification (LAMP), initially developed for the detection of human herpesvirus 7 (HHV-7), was evaluated in this study. Although a LAMP product was detected in HHV-7 DNA, neither HHV-6 nor human cytomegalovirus DNA produced a product. When agarose gel electrophoresis was used for the detection of LAMP products, the sensitivity of a 30-min HHV-7 LAMP reaction reached 250 copies/tube. The use of turbidity for the detection of the LAMP products gave a sensitivity of 500 and 250 copies/tube for 30- and 60-min reactions, respectively. Following these initial validation studies, clinical samples collected from two patients with primary HHV-7 infections were examined by HHV-7 LAMP. By use of agarose gel electrophoresis, HHV-7 LAMP products could be detected in acute-phase plasma samples but no LAMP product was detectable in convalescent-phase plasma samples from either patient. Since a turbidity assay is less sensitive than agarose gel electrophoresis, no HHV-7 LAMP product could be detected in plasma samples after a 30-min LAMP reaction. After a 60-min LAMP reaction, HHV-7 LAMP product could be detected in acute-phase plasma samples.

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Year:  2004        PMID: 15004116      PMCID: PMC356854          DOI: 10.1128/JCM.42.3.1348-1352.2004

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  21 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Detection of loop-mediated isothermal amplification reaction by turbidity derived from magnesium pyrophosphate formation.

Authors:  Y Mori; K Nagamine; N Tomita; T Notomi
Journal:  Biochem Biophys Res Commun       Date:  2001-11-23       Impact factor: 3.575

3.  Human herpesvirus 6 infection after living related liver transplantation.

Authors:  T Yoshikawa; M Ihira; K Suzuki; S Suga; K Iida; Y Saito; K Asonuma; K Tanaka; Y Asano
Journal:  J Med Virol       Date:  2000-09       Impact factor: 2.327

4.  Accelerated reaction by loop-mediated isothermal amplification using loop primers.

Authors:  K Nagamine; T Hase; T Notomi
Journal:  Mol Cell Probes       Date:  2002-06       Impact factor: 2.365

5.  Human herpesvirus-7 infection of the CNS with acute myelitis in an adult bone marrow recipient.

Authors:  K N Ward; R P White; S Mackinnon; M Hanna
Journal:  Bone Marrow Transplant       Date:  2002-12       Impact factor: 5.483

6.  Human herpesviruses 6 and 7 as potential pathogens after liver transplant: prospective comparison with the effect of cytomegalovirus.

Authors:  P D Griffiths; M Ait-Khaled; C P Bearcroft; D A Clark; A Quaglia; S E Davies; A K Burroughs; K Rolles; I M Kidd; S N Knight; S M Noibi; A V Cope; A N Phillips; V C Emery
Journal:  J Med Virol       Date:  1999-12       Impact factor: 2.327

7.  Detection of herpesvirus DNA in the serum of immunocompetent children.

Authors:  Shinya Hara; Hiroshi Kimura; Yo Hoshino; Naoko Tanaka; Kazuo Nishikawa; Masaru Ihira; Tetsushi Yoshikawa; Tsuneo Morishima
Journal:  Microbiol Immunol       Date:  2002       Impact factor: 1.955

8.  Case report: human herpesvirus 7 associated fatal encephalitis in a peripheral blood stem cell transplant recipient.

Authors:  Paul K S Chan; Ki-Wai Chik; Ka-Fai To; Chi-Kong Li; Matthew M K Shing; King-Cheung Ng; Patrick M P Yuen; Augustine F Cheng
Journal:  J Med Virol       Date:  2002-04       Impact factor: 2.327

9.  Prospective study of human betaherpesviruses after renal transplantation: association of human herpesvirus 7 and cytomegalovirus co-infection with cytomegalovirus disease and increased rejection.

Authors:  I M Kidd; D A Clark; C A Sabin; D Andrew; A F Hassan-Walker; P Sweny; P D Griffiths; V C Emery
Journal:  Transplantation       Date:  2000-06-15       Impact factor: 4.939

10.  Clinical features and virological findings in children with primary human herpesvirus 7 infection.

Authors:  S Suga; T Yoshikawa; T Nagai; Y Asano
Journal:  Pediatrics       Date:  1997-03       Impact factor: 7.124

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  14 in total

1.  Detection of human influenza A viruses by loop-mediated isothermal amplification.

Authors:  Leo L M Poon; Cynthia S W Leung; Kwok H Chan; Jack H C Lee; Kwok Y Yuen; Yi Guan; Joseph S M Peiris
Journal:  J Clin Microbiol       Date:  2005-01       Impact factor: 5.948

2.  Rapid detection of herpes simplex virus DNA in cerebrospinal fluid: comparison between loop-mediated isothermal amplification and real-time PCR.

Authors:  Hiroshi Kimura; Masaru Ihira; Yoshihiro Enomoto; Jun-ichi Kawada; Yoshinori Ito; Tsuneo Morishima; Tetsushi Yoshikawa; Yoshizo Asano
Journal:  Med Microbiol Immunol       Date:  2005-05-21       Impact factor: 3.402

3.  Sensitive and rapid detection of herpes simplex virus and varicella-zoster virus DNA by loop-mediated isothermal amplification.

Authors:  Hisatoshi Kaneko; Tomohiro Iida; Koki Aoki; Shigeaki Ohno; Tatsuo Suzutani
Journal:  J Clin Microbiol       Date:  2005-07       Impact factor: 5.948

4.  Development of a loop-mediated isothermal amplification assay for rapid detection of BK virus.

Authors:  Bipin Raj Bista; Chandra Ishwad; Robert M Wadowsky; Pradip Manna; Parmjeet Singh Randhawa; Gaurav Gupta; Meena Adhikari; Rakhi Tyagi; Gina Gasper; Abhay Vats
Journal:  J Clin Microbiol       Date:  2007-02-21       Impact factor: 5.948

5.  Loop-mediated isothermal amplification method for rapid detection of the periodontopathic bacteria Porphyromonas gingivalis, Tannerella forsythia, and Treponema denticola.

Authors:  Akihiro Yoshida; Shiori Nagashima; Toshihiro Ansai; Masayo Tachibana; Hiroaki Kato; Hajime Watari; Tsugunori Notomi; Tadamichi Takehara
Journal:  J Clin Microbiol       Date:  2005-05       Impact factor: 5.948

6.  Rapid diagnosis of herpes simplex virus infection by a loop-mediated isothermal amplification method.

Authors:  Yoshihiko Enomoto; Tetsushi Yoshikawa; Masaru Ihira; Shiho Akimoto; Fumi Miyake; Chie Usui; Sadao Suga; Kayoko Suzuki; Takashi Kawana; Yukihiro Nishiyama; Yoshizo Asano
Journal:  J Clin Microbiol       Date:  2005-02       Impact factor: 5.948

7.  Discriminating between varicella-zoster virus vaccine and wild-type strains by loop-mediated isothermal amplification.

Authors:  Yuki Higashimoto; Masaru Ihira; Akane Ohta; Shigeki Inoue; Chie Usui; Yoshizo Asano; Tetsushi Yoshikawa
Journal:  J Clin Microbiol       Date:  2008-06-11       Impact factor: 5.948

8.  Development of a real-time reverse transcription loop-mediated isothermal amplification method for the rapid detection of porcine epidemic diarrhea virus.

Authors:  Xuewu Yu; Lin Shi; Xiaoping Lv; Wei Yao; Minghui Cao; Hanxun Yu; Xiurong Wang; Shimin Zheng
Journal:  Virol J       Date:  2015-05-14       Impact factor: 4.099

9.  A simple method for the detection of measles virus genome by loop-mediated isothermal amplification (LAMP).

Authors:  Motoko Fujino; Naoko Yoshida; Shinya Yamaguchi; Norimitsu Hosaka; Yoshinori Ota; Tsugunori Notomi; Tetsuo Nakayama
Journal:  J Med Virol       Date:  2005-07       Impact factor: 2.327

10.  Detection of Mycoplasma Contamination of Cell Culture by A Loop-Mediated Isothermal Amplification Method.

Authors:  Zohre Soheily; Mohammad Soleimani; Keivan Majidzadeh-Ardebili
Journal:  Cell J       Date:  2018-11-18       Impact factor: 2.479

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