Literature DB >> 8358233

Measurement of two- and three-bond 13C-1H J couplings to the C delta carbons of leucine residues in staphylococcal nuclease.

G W Vuister1, T Yamazaki, D A Torchia, A Bax.   

Abstract

A new 1H-detected 3D NMR experiment is described that permits quantitative measurement of two- and three-bond 13C-1H couplings in proteins with selectively 13C-enriched methyl sites. The method is demonstrated for staphylococcal nuclease selectively [5,5 13C]-labeled in all 11 leucine positions and ligated with thymidine 3',5'-biphosphate and Ca2+. Two- and three-bond 13C methyl-proton couplings are reported and, together with the measured three-bond JC alpha C delta in uniformly 13C-enriched staphylococcal nuclease, the chi 2-angles and the stereospecific assignments of the C delta methyl group with respect to the prochiral beta-protons were determined. The same residues that were previously found to have high degrees of internal mobility on the basis of 13C relaxation times have measured coupling constants that are indicative of motional averaging.

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Year:  1993        PMID: 8358233     DOI: 10.1007/bf00212516

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  9 in total

1.  Measurement of two-bond JCOH alpha coupling constants in proteins uniformly enriched with 13C.

Authors:  G W Vuister; A Bax
Journal:  J Biomol NMR       Date:  1992-07       Impact factor: 2.835

2.  The crystal structure of the ternary complex of staphylococcal nuclease, Ca2+, and the inhibitor pdTp, refined at 1.65 A.

Authors:  P J Loll; E E Lattman
Journal:  Proteins       Date:  1989

3.  IUPAC-IUB Commission on Biochemical Nomenclature. Abbreviations and symbols for the description of the conformation of polypeptide chains. Tentative rules (1969).

Authors: 
Journal:  Biochemistry       Date:  1970-09-01       Impact factor: 3.162

4.  Structure and refinement of penicillopepsin at 1.8 A resolution.

Authors:  M N James; A R Sielecki
Journal:  J Mol Biol       Date:  1983-01-15       Impact factor: 5.469

5.  Dynamics of methyl groups in proteins as studied by proton-detected 13C NMR spectroscopy. Application to the leucine residues of staphylococcal nuclease.

Authors:  L K Nicholson; L E Kay; D M Baldisseri; J Arango; P E Young; A Bax; D A Torchia
Journal:  Biochemistry       Date:  1992-06-16       Impact factor: 3.162

6.  Stereospecific assignments and chi 1 rotamers for FKBP when bound to ascomycin from 3JH alpha,H beta and 3HN,H beta coupling constants.

Authors:  R X Xu; E T Olejniczak; S W Fesik
Journal:  FEBS Lett       Date:  1992-06-29       Impact factor: 4.124

7.  Quantitative measurement of small through-hydrogen-bond and 'through-space' 1H-113Cd and 1H-199Hg J couplings in metal-substituted rubredoxin from Pyrococcus furiosus.

Authors:  P R Blake; B Lee; M F Summers; M W Adams; J B Park; Z H Zhou; A Bax
Journal:  J Biomol NMR       Date:  1992-09       Impact factor: 2.835

8.  The crystal structure of staphylococcal nuclease refined at 1.7 A resolution.

Authors:  T R Hynes; R O Fox
Journal:  Proteins       Date:  1991

9.  Backbone dynamics of proteins as studied by 15N inverse detected heteronuclear NMR spectroscopy: application to staphylococcal nuclease.

Authors:  L E Kay; D A Torchia; A Bax
Journal:  Biochemistry       Date:  1989-11-14       Impact factor: 3.162

  9 in total
  14 in total

1.  Simultaneous measurement of protein one-bond and two-bond nitrogen-carbon coupling constants using an internally referenced quantitative J-correlated [(15)N,(1)H]-TROSY-HNC experiment.

Authors:  Hans L J Wienk; Mitcheell M Martínez; Gary N Yalloway; Jürgen M Schmidt; Carlos Pérez; Heinz Rüterjans; Frank Löhr
Journal:  J Biomol NMR       Date:  2003-02       Impact factor: 2.835

2.  Measurement of (15)N- (1)H coupling constants in uniformly (15)N-labeled proteins: Application to the photoactive yellow protein.

Authors:  P Düx; B Whitehead; R Boelens; R Kaptein; G W Vuister
Journal:  J Biomol NMR       Date:  1997-10       Impact factor: 2.835

3.  A simple biosynthetic method for stereospecific resonance assignment of prochiral methyl groups in proteins.

Authors:  Michael J Plevin; Olivier Hamelin; Jérôme Boisbouvier; Pierre Gans
Journal:  J Biomol NMR       Date:  2011-02-01       Impact factor: 2.835

4.  Suppression of conformational heterogeneity at a protein-protein interface.

Authors:  Lindsay N Deis; Qinglin Wu; You Wang; Yang Qi; Kyle G Daniels; Pei Zhou; Terrence G Oas
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-08       Impact factor: 11.205

5.  Leucine side-chain rotamers in a glycophorin A transmembrane peptide as revealed by three-bond carbon-carbon couplings and 13C chemical shifts.

Authors:  K R MacKenzie; J H Prestegard; D M Engelman
Journal:  J Biomol NMR       Date:  1996-05       Impact factor: 2.835

6.  Assignments of the 1H, 13C, and 15N resonances of the winged helix domain of the proto-oncoprotein cQin (FoxG1B).

Authors:  Dhammika S Jayawardene; Junmin Liu; Weixing Zhang; Richard W Kriwacki
Journal:  J Biomol NMR       Date:  2002-07       Impact factor: 2.835

Review 7.  Isotope labeling for solution and solid-state NMR spectroscopy of membrane proteins.

Authors:  Raffaello Verardi; Nathaniel J Traaseth; Larry R Masterson; Vitaly V Vostrikov; Gianluigi Veglia
Journal:  Adv Exp Med Biol       Date:  2012       Impact factor: 2.622

8.  Determination of (3)J(H (infi) (supN) ,C (infi) (sup') ) coupling constants in proteins with the C'-FIDS method.

Authors:  A Rexroth; S Szalma; R Weisemann; W Bermel; H Schwalbe; C Griesinger
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

9.  Partially folded equilibrium intermediate of the villin headpiece HP67 defined by 13C relaxation dispersion.

Authors:  Nichole E O'Connell; Michael J Grey; Yuefeng Tang; Pallav Kosuri; Vesselin Z Miloushev; Daniel P Raleigh; Arthur G Palmer
Journal:  J Biomol NMR       Date:  2009-07-31       Impact factor: 2.835

10.  Resonance assignment of methionine methyl groups and chi 3 angular information from long-range proton-carbon and carbon-carbon J correlation in a calmodulin-peptide complex.

Authors:  A Bax; F Delaglio; S Grzesiek; G W Vuister
Journal:  J Biomol NMR       Date:  1994-11       Impact factor: 2.835

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