Literature DB >> 22910848

Determination of (3)J(H (infi) (supN) ,C (infi) (sup') ) coupling constants in proteins with the C'-FIDS method.

A Rexroth1, S Szalma, R Weisemann, W Bermel, H Schwalbe, C Griesinger.   

Abstract

We introduce the C'-FIDS-(1)H,(15)N-HSQC experiment, a new method for the determination of (3)J(H (infi) (supN) ,C (infi) (sup') ) coupling constants in proteins, yielding information about the torsional angle ϕ. It relies on the (1)H,(15)N-HSQC or HNCO experiment, two of the the most sensitive heteronuclear correlation experiments for isotopically labeled proteins. A set of three (1)H,(15)N-HSQC or HNCO spectra are recorded: a reference experiment in which the carbonyl spins are decoupled during t(1) and t(2), a second experiment in which they are decoupled exclusively during t(1) and a third one in which they are coupled in t(1) as well as t(2). The last experiment yields an E.COSY-type pattern from which the (2)J(H (infi) (supN) ,C (infi-1) (sup') ) and (1)J(N(i),C (infi-1) (sup') ) coupling constants can be extracted. By comparison of the coupled multiplet (obtained from the second experiment) with the decoupled multiplet (obtained from the first experiment) convoluted with the (2)J(H (infi) (supN) ,C (infi-1) (sup') ) coupling, the (3)J(H (infi) (supN) ,C (infi) (sup') ) coupling can be found in a one-parameter fitting procedure. The method is demonstrated for the protein rhodniin, containing 103 amino acids. Systematic errors due to differential relaxation are small for (n)J(H(N),C') couplings in biomacromolecules of the size currently under NMR spectroscopic investigation.

Entities:  

Year:  1995        PMID: 22910848     DOI: 10.1007/BF00197805

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  14 in total

1.  Determination of a complete set of coupling constants in 13C-labeled oligonucleotides.

Authors:  H Schwalbe; J P Marino; G C King; R Wechselberger; W Bermel; C Griesinger
Journal:  J Biomol NMR       Date:  1994-09       Impact factor: 2.835

2.  (H)NCAHA and (H)CANNH experiments for the determination of the vicinal coupling constants related to the phi-torsion angle.

Authors:  F Löhr; H Rüterjans
Journal:  J Biomol NMR       Date:  1995-01       Impact factor: 2.835

3.  Calculations of one-, two- and three-bond nuclear spin-spin couplings in a model peptide and correlations with experimental data.

Authors:  A S Edison; J L Markley; F Weinhold
Journal:  J Biomol NMR       Date:  1994-07       Impact factor: 2.835

4.  Estimates of phi and psi torsion angles in proteins from one-, two- and three-bond nuclear spin-spin couplings: application to staphylococcal nuclease.

Authors:  A S Edison; F Weinhold; W M Westler; J L Markley
Journal:  J Biomol NMR       Date:  1994-07       Impact factor: 2.835

5.  The impact of direct refinement against three-bond HN-C alpha H coupling constants on protein structure determination by NMR.

Authors:  D S Garrett; J Kuszewski; T J Hancock; P J Lodi; G W Vuister; A M Gronenborn; G M Clore
Journal:  J Magn Reson B       Date:  1994-05

6.  Conformation of valine side chains in ribonuclease T1 determined by NMR studies of homonuclear and heteronuclear 3J coupling constants.

Authors:  Y Karimi-Nejad; J M Schmidt; H Rüterjans; H Schwalbe; C Greisinger
Journal:  Biochemistry       Date:  1994-05-10       Impact factor: 3.162

7.  Measurement of 15N-13C J couplings in staphylococcal nuclease.

Authors:  F Delaglio; D A Torchia; A Bax
Journal:  J Biomol NMR       Date:  1991-11       Impact factor: 2.835

8.  Amino acid type determination in the sequential assignment procedure of uniformly 13C/15N-enriched proteins.

Authors:  S Grzesiek; A Bax
Journal:  J Biomol NMR       Date:  1993-03       Impact factor: 2.835

9.  Quantitative measurement of small through-hydrogen-bond and 'through-space' 1H-113Cd and 1H-199Hg J couplings in metal-substituted rubredoxin from Pyrococcus furiosus.

Authors:  P R Blake; B Lee; M F Summers; M W Adams; J B Park; Z H Zhou; A Bax
Journal:  J Biomol NMR       Date:  1992-09       Impact factor: 2.835

10.  Stereospecific nuclear magnetic resonance assignments of the methyl groups of valine and leucine in the DNA-binding domain of the 434 repressor by biosynthetically directed fractional 13C labeling.

Authors:  D Neri; T Szyperski; G Otting; H Senn; K Wüthrich
Journal:  Biochemistry       Date:  1989-09-19       Impact factor: 3.162

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.