Literature DB >> 6932013

Different pattern of codon recognition by mammalian mitochondrial tRNAs.

B G Barrell, S Anderson, A T Bankier, M H de Bruijn, E Chen, A R Coulson, J Drouin, I C Eperon, D P Nierlich, B A Roe, F Sanger, P H Schreier, A J Smith, R Staden, I G Young.   

Abstract

Analysis of an almost complete mammalian mitochondrial DNA sequence has identified 23 possible tRNA genes and we speculate here that these are sufficient to translate all the codons of the mitochondrial genetic code. This number is much smaller than the minimum of 31 required by the wobble hypothesis. For each of the eight genetic code boxes with four codons for one amino acid we find a single specific tRNA gene with T in the first (wobble) position of the anticodon. We suggest that these tRNAs with U in the wobble position can recognize all four codons in these genetic code boxes either by a "two out of three" base interaction or by U.N wobble.

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Year:  1980        PMID: 6932013      PMCID: PMC349574          DOI: 10.1073/pnas.77.6.3164

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

1.  A different genetic code in human mitochondria.

Authors:  B G Barrell; A T Bankier; J Drouin
Journal:  Nature       Date:  1979-11-08       Impact factor: 49.962

2.  Structural analysis of nonradioactive RNA by postlabeling: the primary structure of baker's yeast tRNA Leu/CUA.

Authors:  K Randerath; L S Chia; R C Gupta; E Randerath
Journal:  Biochem Biophys Res Commun       Date:  1975-03-03       Impact factor: 3.575

3.  An electron microscope study of the relative positions of the 4S and ribosomal RNA genes in HeLa cells mitochondrial DNA.

Authors:  L Angerer; N Davidson; W Murphy; D Lynch; G Attardi
Journal:  Cell       Date:  1976-09       Impact factor: 41.582

4.  Amino acid specificity of the transfer RNA species coded for by HeLa cell mitochondrial DNA.

Authors:  D C Lynch; G Attardi
Journal:  J Mol Biol       Date:  1976-03-25       Impact factor: 5.469

5.  A strategy of DNA sequencing employing computer programs.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1979-06-11       Impact factor: 16.971

6.  Codon-acticodon recognition in the valine codon family.

Authors:  S K Mitra; F Lustig; B Akesson; U Lagerkvist
Journal:  J Biol Chem       Date:  1977-01-25       Impact factor: 5.157

7.  A computer program to search for tRNA genes.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1980-02-25       Impact factor: 16.971

8.  Codon--anticodon pairing: the wobble hypothesis.

Authors:  F H Crick
Journal:  J Mol Biol       Date:  1966-08       Impact factor: 5.469

9.  Novel features in the genetic code and codon reading patterns in Neurospora crassa mitochondria based on sequences of six mitochondrial tRNAs.

Authors:  J E Heckman; J Sarnoff; B Alzner-DeWeerd; S Yin; U L RajBhandary
Journal:  Proc Natl Acad Sci U S A       Date:  1980-06       Impact factor: 11.205

10.  Codon recognition rules in yeast mitochondria.

Authors:  S G Bonitz; R Berlani; G Coruzzi; M Li; G Macino; F G Nobrega; M P Nobrega; B E Thalenfeld; A Tzagoloff
Journal:  Proc Natl Acad Sci U S A       Date:  1980-06       Impact factor: 11.205

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  98 in total

1.  tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features.

Authors:  Christian Marck; Henri Grosjean
Journal:  RNA       Date:  2002-10       Impact factor: 4.942

2.  Evidence for the frequent use of TTG as the translation initiation codon of mitochondrial protein genes in the nematodes, Ascaris suum and Caenorhabditis elegans.

Authors:  R Okimoto; J L Macfarlane; D R Wolstenholme
Journal:  Nucleic Acids Res       Date:  1990-10-25       Impact factor: 16.971

3.  Codon recognition mechanisms in plant chloroplasts.

Authors:  H Pfitzinger; J H Weil; D T Pillay; P Guillemaut
Journal:  Plant Mol Biol       Date:  1990-05       Impact factor: 4.076

4.  Saccharomyces cerevisiae imports the cytosolic pathway for Gln-tRNA synthesis into the mitochondrion.

Authors:  Jesse Rinehart; Bethany Krett; Mary Anne T Rubio; Juan D Alfonzo; Dieter Söll
Journal:  Genes Dev       Date:  2005-02-10       Impact factor: 11.361

Review 5.  Recent evidence for evolution of the genetic code.

Authors:  S Osawa; T H Jukes; K Watanabe; A Muto
Journal:  Microbiol Rev       Date:  1992-03

6.  Identification of two methionine transfer RNA genes in the maize mitochondrial genome.

Authors:  T D Parks; W G Dougherty; C S Levings; D H Timothy
Journal:  Plant Physiol       Date:  1984-12       Impact factor: 8.340

7.  Special peptidyl-tRNA molecules can promote translational frameshifting without slippage.

Authors:  A Vimaladithan; P J Farabaugh
Journal:  Mol Cell Biol       Date:  1994-12       Impact factor: 4.272

8.  A mammalian mitochondrial serine transfer RNA lacking the "dihydrouridine" loop and stem.

Authors:  M H de Bruijn; P H Schreier; I C Eperon; B G Barrell; E Y Chen; P W Armstrong; J F Wong; B A Roe
Journal:  Nucleic Acids Res       Date:  1980-11-25       Impact factor: 16.971

9.  Polyamines enhance readthrough of the UGA termination codon in a mammalian messenger RNA.

Authors:  M M Hryniewicz; R A Vonder Haar
Journal:  Mol Gen Genet       Date:  1983

10.  Sequence and arrangement of the genes for cytochrome b, URF1, URF4L, URF4, URF5, URF6 and five tRNAs in Drosophila mitochondrial DNA.

Authors:  D O Clary; J A Wahleithner; D R Wolstenholme
Journal:  Nucleic Acids Res       Date:  1984-05-11       Impact factor: 16.971

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