Literature DB >> 6997870

Codon recognition rules in yeast mitochondria.

S G Bonitz, R Berlani, G Coruzzi, M Li, G Macino, F G Nobrega, M P Nobrega, B E Thalenfeld, A Tzagoloff.   

Abstract

The mitochondrial genome of Saccharomyces cerevisiae codes for 24 tRNAs. The nucleotide sequences of the tRNA genes suggest a unique set of rules that govern the decoding of the mitochondrial genetic code. The four codons of unmixed fmilies are recognized by single tRNAs that always have a U in the wobble position of the anticodon. The codons of the mixed families are read by two different tRNAs. Codons terminating in a C or U are recognized by tRNAs with a G and codons terminating in a G or A are recognized by tRNAs with a U in the corresponding positions of the anticodons. There are two exceptions to these rules. In the AUN family for isoleucine and methionine, the isoleucine tRNA has a G and the methionine tRNA has a C in the wobble position. The tRNA for the arginine CGN family also has an A in the wobble position of the anticodon. It is of interest that the CGN codons have not been found in the mitochondrial genes sequenced to date. The simplified decoding system of yeast mitochondria allows all the codons to be recognized by only 24 tRNAs.

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Year:  1980        PMID: 6997870      PMCID: PMC349575          DOI: 10.1073/pnas.77.6.3167

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  20 in total

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Authors:  P Borst; L A Grivell
Journal:  Cell       Date:  1978-11       Impact factor: 41.582

2.  Structure and function of initiator methionine tRNA from the mitochondria of Neurospora crassa.

Authors:  J E Heckman; L I Hecker; S D Schwartzbach; W E Barnett; B Baumstark; U L RajBhandary
Journal:  Cell       Date:  1978-01       Impact factor: 41.582

3.  "Two out of three": an alternative method for codon reading.

Authors:  U Lagerkvist
Journal:  Proc Natl Acad Sci U S A       Date:  1978-04       Impact factor: 11.205

4.  On the physical basis for ambiguity in genetic coding interactions.

Authors:  H J Grosjean; S de Henau; D M Crothers
Journal:  Proc Natl Acad Sci U S A       Date:  1978-02       Impact factor: 11.205

5.  Fine structure physical mapping of 4S RNA genes on mitochondrial DNA of Saccharomyces cerevisiae.

Authors:  G J Van Ommen; G S Groot; P Borst
Journal:  Mol Gen Genet       Date:  1977-09-09

6.  Hybridization of mitochondrial transfer RNA's with mitochondrial and nuclear DNA of grande (wild type) yeast.

Authors:  J Casey; M Cohen; M Rabinowitz; H Fukuhara; G S Getz
Journal:  J Mol Biol       Date:  1972-02-14       Impact factor: 5.469

7.  Codon--anticodon pairing: the wobble hypothesis.

Authors:  F H Crick
Journal:  J Mol Biol       Date:  1966-08       Impact factor: 5.469

8.  Assembly of the mitochondrial membrane system. The DNA sequence of a mitochondrial ATPase gene in Saccharomyces cerevisiae.

Authors:  G Macino; A Tzagoloff
Journal:  J Biol Chem       Date:  1979-06-10       Impact factor: 5.157

9.  Nucleotide sequence of the mitochondrial structural gene for subunit 9 of yeast ATPase complex.

Authors:  L A Hensgens; L A Grivell; P Borst; J L Bos
Journal:  Proc Natl Acad Sci U S A       Date:  1979-04       Impact factor: 11.205

10.  Yeast mitochondrial DNA specifies tRNA for 19 amino acids. Deletion mapping of the tRNA genes.

Authors:  N C Martin; M Rabinowitz; H Fukuhara
Journal:  Biochemistry       Date:  1977-10-18       Impact factor: 3.162

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  117 in total

1.  Intragenic suppressors that restore the activity of the maturase encoded by the second intron of the Saccharomyces cerevisiae cyt b gene.

Authors:  Ewa Maciaszczyk; Stanislaw Ulaszewski; Jaga Lazowska
Journal:  Curr Genet       Date:  2004-05-27       Impact factor: 3.886

2.  Saccharomyces cerevisiae imports the cytosolic pathway for Gln-tRNA synthesis into the mitochondrion.

Authors:  Jesse Rinehart; Bethany Krett; Mary Anne T Rubio; Juan D Alfonzo; Dieter Söll
Journal:  Genes Dev       Date:  2005-02-10       Impact factor: 11.361

3.  Chloroplast heteroplasmicity is stabilized by an amber-suppressor tryptophan tRNA(CUA).

Authors:  W Yu; R J Spreitzer
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-01       Impact factor: 11.205

4.  Identification of two methionine transfer RNA genes in the maize mitochondrial genome.

Authors:  T D Parks; W G Dougherty; C S Levings; D H Timothy
Journal:  Plant Physiol       Date:  1984-12       Impact factor: 8.340

5.  Biogenesis of mitochondria: DNA sequence analysis of mit- mutations in the mitochondrial oli1 gene coding for mitochondrial ATPase subunit 9 in Saccharomyces cerevisiae.

Authors:  B G Ooi; G L McMullen; A W Linnane; P Nagley; C E Novitski
Journal:  Nucleic Acids Res       Date:  1985-02-25       Impact factor: 16.971

6.  Special peptidyl-tRNA molecules can promote translational frameshifting without slippage.

Authors:  A Vimaladithan; P J Farabaugh
Journal:  Mol Cell Biol       Date:  1994-12       Impact factor: 4.272

7.  Gene organization and newly identified groups of genes of the chloroplast genome from a liverwort, Marchantia polymorpha.

Authors:  K Ohyama; T Kohchi; H Fukuzawa; T Sano; K Umesono; H Ozeki
Journal:  Photosynth Res       Date:  1988-04       Impact factor: 3.573

8.  The complete DNA sequence of the mitochondrial genome of Podospora anserina.

Authors:  D J Cummings; K L McNally; J M Domenico; E T Matsuura
Journal:  Curr Genet       Date:  1990-05       Impact factor: 3.886

9.  Polyamines enhance readthrough of the UGA termination codon in a mammalian messenger RNA.

Authors:  M M Hryniewicz; R A Vonder Haar
Journal:  Mol Gen Genet       Date:  1983

10.  Sequence and arrangement of the genes for cytochrome b, URF1, URF4L, URF4, URF5, URF6 and five tRNAs in Drosophila mitochondrial DNA.

Authors:  D O Clary; J A Wahleithner; D R Wolstenholme
Journal:  Nucleic Acids Res       Date:  1984-05-11       Impact factor: 16.971

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