Literature DB >> 6096813

Synthesis of deoxyoligonucleotides containing 7-deazaadenine: recognition and cleavage by restriction endonuclease Bgl II and Sau 3AI (nucleosides and nucleotides Part 55).

A Ono, M Sato, Y Ohtani, T Ueda.   

Abstract

Deoxydecanucleotides having a recognition sequence of Bgl II and Sau 3AI, and their 7-deazaadenine analogs were synthesized. The decanucleotides containing 7-deazaadenine in place of adenine were partially resistant to the hydrolysis by Sau 3AI and strongly resistant to that by Bgl II. A new hypothesis on the mode of recognition and cleavage of specific nucleotide sequences by Bgl II, recognizing one strand and cleaving the other strand, is presented.

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Year:  1984        PMID： 6096813      PMCID： PMC320430          DOI： 10.1093/nar/12.23.8939

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  8 in total

1.  A restriction endonuclease from Staphylococcus aureus.

Authors:  J S Sussenbach; C H Monfoort; R Schiphof; E E Stobberingh
Journal:  Nucleic Acids Res       Date:  1976-11       Impact factor: 16.971

2.  Sequence-specific recognition of double helical nucleic acids by proteins.

Authors:  N C Seeman; J M Rosenberg; A Rich
Journal:  Proc Natl Acad Sci U S A       Date:  1976-03       Impact factor: 11.205

Review 3.  Structures and mechanisms of DNA restriction and modification enzymes.

Authors:  P Modrich
Journal:  Q Rev Biophys       Date:  1979-08       Impact factor: 5.318

4.  Biochemical and genetic properties of site-specific restriction endonucleases in Bacillus globigii.

Authors:  C H Duncan; G A Wilson; F E Young
Journal:  J Bacteriol       Date:  1978-04       Impact factor: 3.490

5.  Purification and properties of the Bg1I and II endonucleases.

Authors:  T A Bickle; V Pirrotta; R Imber
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

6.  DNA sequence analysis: a general, simple and rapid method for sequencing large oligodeoxyribonucleotide fragments by mapping.

Authors:  E Jay; R Bambara; R Padmanabhan; R Wu
Journal:  Nucleic Acids Res       Date:  1974-03       Impact factor: 16.971

7.  Effect of nucleotide analogs on the cleavage of DNA by the restriction enzymes AluI, DdeI, HinfI, RsaI, and TaqI.

Authors:  J W Bodnar; W Zempsky; D Warder; C Bergson; D C Ward
Journal:  J Biol Chem       Date:  1983-12-25       Impact factor: 5.157

8.  Solid-phase synthesis of polynucleotides. IV. Usage of polystyrene resins for the synthesis of polydeoxyribonucleotides by the phosphostriester method.

Authors:  K Miyoshi; R Arentzen; T Huang; K Itakura
Journal:  Nucleic Acids Res       Date:  1980-11-25       Impact factor: 16.971
  8 in total
  16 in total

1.  Cleavage of methylated CCCGGG sequences containing either N4-methylcytosine or 5-methylcytosine with MspI, HpaII, SmaI, XmaI and Cfr9I restriction endonucleases.

Authors:  V Butkus; L Petrauskiene; Z Maneliene; S Klimasauskas; V Laucys; A Janulaitis
Journal:  Nucleic Acids Res       Date:  1987-09-11       Impact factor: 16.971

2.  Some restriction endonucleases tolerate single mismatches of the pyrimidine.purine type.

Authors:  M Petranović; D Petranović; C Dohet; P Brooks; M Radman
Journal:  Nucleic Acids Res       Date:  1990-04-25       Impact factor: 16.971

3.  Interaction of the restriction endonuclease ScaI with its substrates.

Authors:  K Kita; N Hiraoka; F Kimizuka; A Obayashi; H Kojima; H Takahashi; H Saito
Journal:  Nucleic Acids Res       Date:  1985-10-11       Impact factor: 16.971

4.  Restriction endonucleases HindII and TaqI cleave DNA with mismatched nucleotides within their recognition sequences.

Authors:  J Jiricny; D Martin
Journal:  Nucleic Acids Res       Date:  1986-03-11       Impact factor: 16.971

5.  Synthesis of decadeoxyribonucleotides containing N6-methyladenine, N4-methylcytosine, and 5-methylcytosine: recognition and cleavage by restriction endonucleases (nucleosides and nucleotides part 74).

Authors:  A Ono; T Ueda
Journal:  Nucleic Acids Res       Date:  1987-01-12       Impact factor: 16.971

6.  Alkyl phosphotriester modified oligodeoxyribonucleotides. V. Synthesis and absolute configuration of Rp and Sp diastereomers of an ethyl phosphotriester (Et) modified EcoRI recognition sequence, d[GGAA(Et)TTCC]. A synthetic approach to regio- and stereospecific ethylation-interference studies.

Authors:  K A Gallo; K L Shao; L R Phillips; J B Regan; M Koziolkiewicz; B Uznanski; W J Stec; G Zon
Journal:  Nucleic Acids Res       Date:  1986-09-25       Impact factor: 16.971

7.  Analysis of the recognition mechanism involved in the EcoRV catalyzed cleavage of DNA using modified oligodeoxynucleotides.

Authors:  A Fliess; H Wolfes; F Seela; A Pingoud
Journal:  Nucleic Acids Res       Date:  1988-12-23       Impact factor: 16.971

8.  T4 RNA ligase catalyzed synthesis of base analogue-containing oligodeoxyribonucleotides and a characterization of their thermal stabilities.

Authors:  C A Brennan; R I Gumport
Journal:  Nucleic Acids Res       Date:  1985-12-20       Impact factor: 16.971

9.  Minor-groove-modified oligonucleotides: synthesis of decadeoxynucleotides containing hypoxanthine, N2-methylguanine and 3-deazaadenine, and their interactions with restriction endonucleases Bgl II, Sau, 3AI, and Mbo I (Nucleosides and Nucleotides Part 75).

Authors:  A Ono; T Ueda
Journal:  Nucleic Acids Res       Date:  1987-04-10       Impact factor: 16.971

10.  The synthesis of 2-pyrimidinone nucleosides and their incorporation into oligodeoxynucleotides.

Authors:  B Gildea; L W McLaughlin
Journal:  Nucleic Acids Res       Date:  1989-03-25       Impact factor: 16.971
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