| Literature DB >> 31649991 |
Christa M Cobbaert1, Figen Arslan1, Imma Caballé Martín2, Antoni Alsius Serra2, Ester Picó-Plana2, Víctor Sánchez-Margalet3, Antonio Carmona-Fernández3, John Burden4, André Ziegler4, Walter Bechel4.
Abstract
BACKGROUND: We evaluated the analytical performance of the fully automated cobas® 6500 urine work area and its automated components-cobas u 601 and cobas u 701. DESIGN AND METHODS: The study was conducted at three European centers using un-centrifuged surplus routine urine samples; all measurements were performed within 2 h of sample collection. Precision, sample carry-over, and method comparisons were evaluated per Clinical and Laboratory Standards Institute guidelines. Method comparisons: cobas u 601 versus Urisys 2400 and cobas u 411 urine test strips; and cobas u 701 versus KOVA® visual microscopy and iQ200 analyzer. Operability and functionality were assessed using questionnaires.Entities:
Keywords: Automated biology—high-throughput screening; Clinical automation; Laboratory management—workflow
Year: 2019 PMID: 31649991 PMCID: PMC6804654 DOI: 10.1016/j.plabm.2019.e00139
Source DB: PubMed Journal: Pract Lab Med ISSN: 2352-5517
Fig. 1cobas 6500 parameters and their abbreviations.
Fig. 2Workflow diagram for sample processing on the cobas u 701 analyzer (upper panel). The filled cuvettes (images 1 and 2) are briefly centrifuged (10 s at 260×g) to obtain a single layer of particles (image 3). The microscope then automatically records high-resolution images (image 4); 15 images (image 5) are used in the analysis by the Automated Image Evaluation Module (AIEM), which utilizes a neural-network-based algorithm (image 6). The AIEM comprises different stages for generation of the final results, using probability plots followed by comparison with a characteristic image database (image 7). The evaluation takes approximately 3–4 s per image. Example of result image from the cobas u 701 analyzer (lower panel). Additional images are shown in Supplementary Material S1. RBC, red blood cells; SEC, squamous epithelial cells; WBC, white blood cells.
21-day intermediate precision results for all parameters on the cobas u 601 module using quality control samples (Bio-Rad Liquichek Urinalysis Control).
| Parameter | Result | Target range | SD [% remission] | Exact agreement [%] | Agreement within two adjacent ranges [%] |
|---|---|---|---|---|---|
| BIL | Negative | Negative | 0.6–0.7 | 100 | 100 |
| ERY | Negative | Negative | 0.5–1.4 | 100 | 100 |
| KET | Negative | Negative | 0.5–1.0 | 100 | 100 |
| GLU | Normal | Normal | 0.6–1.2 | 100 | 100 |
| LEU | Negative | Negative | 0.7–2.7 | 100 | 100 |
| NIT | Negative | Negative | 0.5–2.0 | 100 | 100 |
| PRO | Negative | Negative | 0.6–0.8 | 100 | 100 |
| UBG | Normal | Normal | 0.6–0.7 | 100 | 100 |
| pH | 6.5 | 5–6.5 | 0.5–0.6 | 76–100 | 100 |
| BIL | 6 mg/dL | 3–6 mg/dL | 0.7 | 100 | 100 |
| ERY | 250 ERY/μL | 150–250 ERY/μL | 1.3–1.4 | 100 | 100 |
| KET | 150 mg/dL | 50–150 mg/dL | 0.6–2.2 | 100 | 100 |
| GLU | 1000 mg/dL | 300–1000 mg/dL | 0.4–0.7 | 100 | 100 |
| LEU | 500 LEU/μL | 100–500 LEU/μL | 1.4–1.9 | 100 | 100 |
| NIT | Positive | Positive | 0.7–2.3 | 100 | 100 |
| PRO | 150 mg/dL | 150–500 mg/dL | 0.5 | 75–100 | 100 |
| UBG | 12 mg/dL | 8–12 mg/dL | 0.8 | 100 | 100 |
| pH | 7 | 7–8 | 0.5–0.7 | 100 | 100 |
21-day precision experiments were performed at each site, with four measurements per day, for a total of 84 measurements per parameter per control per site; a total of 252 measurements per parameter were performed. The overall range of values from the three sites is shown.
BIL, bilirubin; ERY, erythrocytes and hemoglobin; GLU, glucose; KET, ketones; LEU, leukocytes; NIT, nitrite; PRO, protein; SD, standard deviation; UBG, urobilinogen.
Fig. 3Method comparison results between cobas u 601 and cobas u 411 analyzers for selected parameters. ERY, erythrocytes and hemoglobin; LEU, leukocytes; NIT, nitrite; PRO, protein.
21-day intermediate precision results for determination of quantitative parameters (RBC and WBC) with the cobas u 701 module using quality control samples (Bio-Rad qUAntify Control).
| Parameter | Target [p/μL] | Mean | Precision | |
|---|---|---|---|---|
| RBC | 252 | 0–25 | 0.3–2.2 | SD 0.6–2.5 |
| WBC | 252 | 0–25 | 0.0–0.0 | SD 0.0–0.1 |
| RBC | 252 | 220–659 | 435–479 | CV 8.2–8.6% |
| WBC | 252 | 139–418 | 250–268 | CV 7.2–9.3% |
21-day precision experiments were performed at each site, with four measurements per day, for a total of 84 measurements per parameter per control per site; a total of 252 measurements per parameter were performed. The overall range of values from the three sites is shown.
CV, coefficient of variation; RBC, red blood cells; SD, standard deviation; WBC, white blood cells.
Modified intermediate precision results for determination of semi-quantitative parameters on the cobas u 701 module.
| Parameter | Exact agreement [%] | Agreement within two adjacent ranges [%] |
|---|---|---|
| BAC | 100 | 100 |
| HYA | 100 | 100 |
| NEC | 95–100 | 100 |
| SEC | 100 | 100 |
| BAC | 60–100 | 100 |
| HYA | 55–95 | 100 |
| NEC | 55–100 | 100 |
| SEC | 60–100 | 100 |
| BAC | 100 | 100 |
| HYA | 85–100 | 100 |
| NEC | 90–100 | 100 |
| SEC | 50–95 | 100 |
Due to low stability of analytes, a multi-day intermediate precision experiment was not possible. Instead, 20 measurements were made over five runs on 1 day on each sample. The overall range of values from the three sites is shown.
BAC, bacteria; HYA, hyaline casts; NEC, non-squamous epithelial cells; SEC, squamous epithelial cells.
Fig. 4Data from a dilution series linearity experiment for squamous epithelial cells; the average of three values is shown for each dilution (upper panel). The green shading demarcates the range borders from the semi-quantitative results. Hyaline recovery experiment data from site 1 (lower panel). For each dilution (100%, 33%, and 0%), the three obtained results are shown (minimum, median, and maximum) and the average. HYA, hyaline casts; SEC, squamous epithelial cells.
Fig. 5Bland-Altman difference plots (upper panels) and Passing-Bablok regression plots (lower panels) for RBC and WBC counts measured using the cobas u 701 analyzer versus KOVA visual microscopy. RBC, red blood cells; WBC, white blood cells.
Passing-Bablok regression analysis of RBC and WBC counts measured using the iQ200 analyzer versus KOVA visual microscopy, the cobas u 701 analyzer versus KOVA visual microscopy, and the cobas u 701 analyzer versus the iQ200 analyzer.
| Comparison | Passing-Bablok regression | |||||
|---|---|---|---|---|---|---|
| x axis | y axis | Slope | Intercept | Pearson’s | Kendall’s Tau | |
| KOVA visual microscopy | iQ200 analyzer | 444 | 0.57 | 1.55 | 0.84 | 0.60 |
| KOVA visual microscopy | cobas u 701 analyzer | 378 | 0.89 | −2.30 | 0.95 | 0.75 |
| iQ200 analyzer | cobas u 701 analyzer | 383 | 1.57 | −5.88 | 0.86 | 0.65 |
| KOVA visual microscopy | iQ200 analyzer | 507 | 0.87 | 1.82 | 0.90 | 0.67 |
| KOVA visual microscopy | cobas u 701 analyzer | 501 | 0.96 | 0.75 | 0.96 | 0.76 |
| iQ200 analyzer | cobas u 701 analyzer | 515 | 1.16 | −1.65 | 0.94 | 0.74 |
RBC, red blood cells; WBC, white blood cells.
Sensitivity and specificity of all cobas u 701 parameters when using the iQ200 analyzer or KOVA visual microscopy as a predicate device, and comparison of the iQ200 analyzer versus KOVA visual microscopy.
| Parameter | cobas u 701 vs KOVA | cobas u 701 vs iQ200 | iQ200 vs KOVA | cobas u 701 reclassification vs KOVA | ||||
|---|---|---|---|---|---|---|---|---|
| Specificity [%] | Sensitivity [%] | Specificity [%] | Sensitivity [%] | Specificity [%] | Sensitivity [%] | Specificity [%] | Sensitivity [%] | |
| BAC | 78.0 | 89.3 | * | * | * | * | 78.0 | 89.7 ↑ |
| NEC | 82.4 | 73.8 | 73.8 | 82.1 | 95.9 | 39.5 | 82.7 ↑ | 74.3 ↑ |
| SEC | 91.2 | 91.9 | 87.5 | 93.1 | 92.4 | 80.2 | 90.1 ↓ | 91.9 |
| HYA | 96.6 | 82.0 | 90.8 | 88.2 | 98.8 | 18.0 | 97.2 ↑ | 82.0 |
| PAT | 91.0 | 83.6 | 84.7 | 43.8 | 98.0 | 10.9 | 94.5 ↑ | 78.2 ↓ |
| CRY | 93.0 | 83.8 | 91.0 | 88.7 | 98.3 | 67.5 | 96.3 ↑ | 87.5 ↑ |
| YEA | 94.5 | 86.5 | 94.1 | 50.7 | 91.3 | 73.0 | 95.6 ↑ | 89.2 ↑ |
| MUC | 86.8 | 69.5 | 82.5 | 84.4 | 96.0 | 36.4 | 86.8 | 69.2 ↓ |
| SPRM | 96.3 | 73.3 | 94.5 | 76.5 | 98.9 | 32.4 | 97.7 ↑ | 76.5 ↑ |
Arrows indicate whether reclassification based on the cobas u 701 results changed the sensitivity or specificity. *Bacteria were not assessed on the iQ200 analyzer.
BAC, bacteria; CRY, crystals; HYA, hyaline casts; MUC, mucus; NEC, non-squamous epithelial cells; PAT, pathological casts; SEC, squamous epithelial cells; SPRM, sperm; YEA, yeast.