| Literature DB >> 30999909 |
Min Su1,2,3, Yuhang Xiao2,4, Junliang Ma1, Yanyan Tang2, Bo Tian1, Yuqin Zhang4, Xu Li1, Zhining Wu1, Desong Yang1, Yong Zhou1, Hui Wang2, Qianjin Liao5,6, Wenxiang Wang7,8.
Abstract
Circular RNAs (circRNAs) are a class of RNA molecules with closed loops and high stability. CircRNAs are abundantly expressed in eukaryotic organisms and exhibit both location- and step-specificity. In recent years, circRNAs are attracting considerable research attention attributed to their possible contributions to gene regulation through a variety of actions, including sponging microRNAs, interacting with RNA-binding proteins, regulating transcription and splicing, and protein translation. Growing evidence has revealed that circRNAs play critical roles in the development and progression of diseases, especially in cancers. Without doubt, expanding our understanding of circRNAs will enrich knowledge of cancer and provide new opportunities for cancer therapy. In this review, we provide an overview of the characteristics, functions and functional mechanisms of circRNAs. In particular, we summarize current knowledge regarding the functions of circRNAs in the hallmarks, stemness, resistance of cancer, as well as the possibility of circRNAs as biomarkers in cancer.Entities:
Keywords: Biomarker; Cancer; CircRNAs; Function; Hallmarks; Resistance; Stemness
Mesh:
Substances:
Year: 2019 PMID: 30999909 PMCID: PMC6471953 DOI: 10.1186/s12943-019-1002-6
Source DB: PubMed Journal: Mol Cancer ISSN: 1476-4598 Impact factor: 27.401
Fig. 1Formation of three types of circRNAs. a Exonic circular RNA (ecircRNA) is formed through back-splicing of the 5’splice site (splice donor site) to a 3’splice site (splice acceptor site); (b) The intron 1 is removed and bring the 5′ splice site of Exon 2 close to 3′ splice site of Exon 1, to form a ecircRNA that contains multiple exons. Exons can also skip splicing, exon 1 can also link with exon 3; (c) Circular intronic RNA (ciRNA) are derived from intron lariats that escape the normal intron debranching and degradation. Reverse complementary sequences of lariat intron excised from pre-mRNA can pair to produce close loop structure termed as ciRNA; (d) Exon–intron circRNAs (EIciRNAs) are circularized with introns‘retained’between the exons. Intron 3 retaines with Exon 3 and Exon 4 to form an EIciRNAs
Fig. 2The functional mechanisms of CircRNAs. a Acting as miRNA sponge; (b) Binding with RNA binding protein (RBP); (c) Regulating transcription; (d) Regulating splicing; (e) Translated into Protein; (f) Regulating epigenetic alterations
Fig. 3CircRNAs involved in the hallmarks of cancer. a CDR1as and circHIPK3 active cell proliferative through regulating EGFR; (b) Circ-ITCH et al. promote cancer cells evading antigrowth signals by preventing expression or activation of tumor suppressors, such as PTEN and CDK; (c) Hsa_circ_0007534 et al. promote cancer cells evading cell death via regulating cellular apoptosis or autophagy; (d) Has-circ-0020397 limits replicative potential of cancer cell trough regulating TERT; (e) CircRNA-MYLK et al. sustain angiogenesis trough regulating VEGF; (f) Dirc-10,720 et al. regulate the process of EMT and thus tissue invasion and metastasis of cancer
CircRNAs involved in the hallmarks of cancer
| Function | CircRNA | Cancer type | expression | Associated clinical features | Associated cell process | Targets | Ref. |
|---|---|---|---|---|---|---|---|
| Sustaining growth signaling | CDR1as | NSCLC | up | TNM stage, lymph nodes metastasis and survival time | promote cell vitalities and growth, inhibit apoptosis and cell cycle arrest | miR-7/EGFR, CCNE1, PIK3CD. | [ |
| CDR1as | CRC | up | advanced tumor stage, tumor depth, and survival time | – | miR-7/EGFR, RAF1 | [ | |
| CDR1as | HCC | down | – | promote cell growth, adhesion, and inhibit migration | miR-7/EGFR | [ | |
| circHIPK3 | CRC | up | metastasis, clinical stage and survival time | inhibite cell proliferation, migration, invasion, and induce apoptosis | miR-7/EGFR, FAK, IGF1R, YY1 | [ | |
| hsa_circ_0046701 | glioma | up | – | promote cell proliferation and invasion | miR-142-3p/ITGB8 | [ | |
| circ-FBXW7 | glioblastoma | down | survival time | inhibit cell proliferation and cell cycle acceleration | FBXW7-185aa/c-Myc | [ | |
| Circ-Amotl1 | – | up | – | promote cell proliferation | c-myc | [ | |
| Evading growth inhibitors | circ-ITCH | Bca | down | histological grade and survival time | inhibite cell proliferation, migration, invasio, induce G1/S cell cycle arrest and apoptosis | miR-17, miR-224/p21, PTEN axis | [ |
| circ-ZFR | GC | down | – | inhibit cell propagation, cell cycle and promote apoptosis | miR-130a, miR-107/PTEN | [ | |
| CDR1as | GC | up | lymph nodes metastasis and survival time | promote cell proliferation, migration and inhibit apoptosis | miR-7/PTEN/PI3K/AKT | [ | |
| circRNA-000425 | GC | down | – | inhibit cell growth | miR-17,miR-106/p21, BIM | [ | |
| Circ100284 | – | up | – | promote cell cycle acceleration | miR-217/EZH2/cyclin D1, CDK4 | [ | |
| hsa_circ_0016788 | HCC | up | – | promote cell proliferation, invasion and inhibit apoptosis | miR-486/CDK4 axis | [ | |
| circHIPK3 | gallbladder cancer | up | – | promote cell survival and proliferation, inhibit cell apoptosis | miR-124/ROCK1, CDK6 | [ | |
| Resisting apoptosis | hsa_circ_0007534 | CRC | up | tumor stage and lymph node metastasis | ptomote cell proliferation and inhibit apoptosis | Bcl-2, Bax | [ |
| circUBAP2 | osteosarcoma | up | tumor progression and prognosis | promote cell growth and inhibit apoptosis | miR-143/Bcl-2 | [ | |
| hsa_circ_0009910 | osteosarcoma | up | – | promote cell proliferation inhibition, inhibit cell cycle arrest, and inhibit apoptosis | miR-449a/IL6R/Bcl-2/Bax | [ | |
| hsa_circRNA_103809 | CRC | down | – | promote apoptosis | miR-532-3p/FOXO4 axis | [ | |
| circNFIX | glima | up | – | promote cell propagation, migration and inhibit apoptosis | miR-34a-5p/NOTCH1 | [ | |
| circ-DNMT1 | BC | up | – | inhibit autophagy, promote cell proliferation and survival | p53, AUF1 | [ | |
| Uncontrolled replicative immortality | has-circ-0020397 | CRC | up | – | promote cell viability and inhibit apoptosis | mir-138/TERT, PD-L1 | [ |
| Promoting angiogenesis | circRNA-MYLK | Bca | up | pathological stage, T and N classifications and survival time | promote cell growth, angiogenesis and metastasis | miR-29a/VEGFA/VEGFR2 | [ |
| cZNF292 | Glima | up | – | promote cell proliferation, tube formation and angiogenic potential | VEGF-A, EGF, TGF-β1 | [ | |
| circHIPK3 | Bca | down | tumor grade, invasion, lymph node metastasis | inhibit migration, invasion, and angiogenesis | miR-558/HPSE/VEGF | [ | |
| Activating invasion and metastasis | circ-10,720 | HCC | up | Tumor metastasis and survival time | promote cell proliferation, migration, invasion and EMT | Vimentin | [ |
| circPTK2 | NSCLC | down | – | inhibit cell invasion and EMT | miR-429, miR-200b-3p/TIF1y | [ | |
| circSMAD2 | HCC | down | – | inhibit cell migration, invasion, and EMT | miR-629 | [ | |
| hsa_circ_0061140 | ovarian cancer | up | – | promote cell proliferation, migration, invasion and EMT | miR-370/FOXM1 | [ | |
| circ_0067934 | NSCLC | up | TNM stage, lymph node statu, distant metastasis and survival time | promote cell proliferation, migration, invasion and EMT | N-cadherin, vimentin snail, and E-cadherin | [ | |
| circRNA_0023642 | GC | up | – | pormote cell proliferation, migration, invasion and EMT | N-cadherin, vimentin snail, and E-cadherin | [ |
CircRNAs involved in stemness and chemotherapy resistance of cancer
| Function | CircRNA | Cancer type | expression | Associated clinical features | Associated cell process | Targets | Ref |
|---|---|---|---|---|---|---|---|
| Regulating stemness | circVRK1 | BC | down | – | decrease proportion of BCSCs with CD44 + CD24- phenotype, suppress BCSC’s expansion and self-renewal capacity | – | [ |
| hg19_circ_0005033 | LSCC | up | – | promote proliferation, migration, invasion, and chemotherapy resistance of laryngeal cancer stem cells | miR-4521 | [ | |
| Regulating chemotherapy resistance | circPVT1 | osteosarcoma | up | enneking stage, chemoresistance, lung metastasis and survival | contributes to doxorubicin and cisplatinresistance | ABCB1 | [ |
| circRNA-MTO1 (hsa-circRNA-007874) | BC | up | – | inhibit cell viability and reverse monastrol resistance | TRAF4/Eg5 axis | [ | |
| circBA9.3 | CML | up | – | promote resistance against TKI therapy | c-ABL1 and BCR-ABL1 | [ |
CircRNAs as liquid biopsy biomarkers in cancer
| Source | Cancer type | Cohort size | CircRNA | Expression | Associated clinical features | Ref |
|---|---|---|---|---|---|---|
| saliva | OSCC | 90 OSCC patients, 70 OLK subjects | hsa_circ_0001874 | up | TNM stage, tumor grade | [ |
| OSCC | 90 OSCC patients, 70 OLK subjects | hsa_circ_0001971 | up | TNM stage | [ | |
| plasma | GC | 104 GC patients, 104 healthy individuals | Hsa_circ_0000190 | down | tumor diameter, lymphatic metastasis, distal metastasis, TNM stage, CA19–9levels | [ |
| GC | 20 GC patients, 20 healthy individuals | hsa_circ_0006633 | up | distal metastasis, tissue carcinoembryonic antigen level | [ | |
| GC | 45 GC patients, 17 healthy individuals | hsa_circ_0000520 | down | CEA expression | [ | |
| GC | 24 GC patients, 14 healthy individuals | hsa_circ_0000673 | down | TNM stage | [ | |
| GC | 121 GC patients, 121 healthy individuals | hsa_circ_0001017, hsa_circ_0061276 | down | OS, DFS | [ | |
| ESCC | 30 ESCC patients, 25 healthy individuals | Circ-TTC17 | up | TNM stage, lymphatic metastasis, OS | [ | |
| PC | 31 PC patients, 31 healthy individuals | circ-LDLRAD3 | up | CA19–9, N classification, venous invasion, lymphatic invasion | [ | |
| BC | 57 BC patients, 17 healthy individuals | hsa_circ_0001785 | down | histological grade, TNM stage, distant metastasis | [ | |
| HCC | 104 HCC patients, 52 healthy individuals | hsa_circ_0001445 | down | AFP level | [ | |
| GC | 102 GC patients, 105 healthy individuals | Hsa_circ_0000181 | down | tumor differentiation, carcinoembryonic antigen | [ | |
| LAC | 30 LAC patients, 30 healthy individuals | hsa_circ_0013958 | up | TNM stage, lymphatic metastasis | [ | |
| serum | HCC | 64 HCC patients, 30 healthy individuals | circ-ZEB1.33 | up | TMN stages, OS | [ |
| BCa | 197 BCa patients, 97 healthy individuals | hsa_circ_0000285 | down | tumor size, differentiation, lymph node metastasis, distant metastasis, TNM stage, OS | [ | |
| NPC | 150 NPC patients, 100 healthy individuals | circRNA_0000285 | up | tumor size, differentiation, lymph node metastasis, distant metastasis, TNM stage. | [ | |
| exosome (serum and urine) | UCB | 71 UCB patients, 36 healthy individuals | circPRMT5 | up | lymph node metastasis, T and N status, DFS | [ |
| UCB | 18 UCB patients, 14 healthy individuals | circPRMT5 | up | lymph node metastasis, T and N status, DFS | [ |