Literature DB >> 27255916

Circular RNA: an emerging key player in RNA world.

Xianwen Meng, Xue Li, Peijing Zhang, Jingjing Wang, Yincong Zhou, Ming Chen.   

Abstract

Insights into the circular RNA (circRNA) exploration have revealed that they are abundant in eukaryotic transcriptomes. Diverse genomic regions can generate different types of RNA circles, implying their diversity. Covalently closed loop structures elevate the stability of this new type of noncoding RNA. High-throughput sequencing analyses suggest that circRNAs exhibit tissue- and developmental-specific expression, indicating that they may play crucial roles in multiple cellular processes. Strikingly, several circRNAs could function as microRNA sponges and regulate gene transcription, highlighting a new class of important regulators. Here, we review the recent advances in knowledge of endogenous circRNA biogenesis, properties and functions. We further discuss the current findings about circRNAs in human diseases. In plants, the roles of circRNAs remain a mystery. Online resources and bioinformatics identification of circRNAs are essential for the analysis of circRNA biology, although different strategies yield divergent results. The understanding of circRNA functions remains limited; however, circRNAs are enriching the RNA world, acting as an emerging key player.
© The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  bioinformatics identification; circular RNA; high-throughput sequencing; human disease; miRNA sponge; noncoding RNA

Mesh:

Substances:

Year:  2017        PMID: 27255916     DOI: 10.1093/bib/bbw045

Source DB:  PubMed          Journal:  Brief Bioinform        ISSN: 1467-5463            Impact factor:   11.622


  99 in total

1.  Investigation of circular RNAs in an ectoparasitic mite Varroa destructor (Acarina: Varroidae) of the honey bee.

Authors:  Zheguang Lin; Hao Xu; Xiaoling Su; Yalu Ke; Wei Wang; Yujiao Li; Mingliang Zhuang; Heng Chen; Yibing Liu; Kang Wang; Guohong Chen; Ting Ji
Journal:  Parasitol Res       Date:  2021-01-16       Impact factor: 2.289

2.  Database Resources for Functional Circular RNAs.

Authors:  Dahui Hu; Peijing Zhang; Ming Chen
Journal:  Methods Mol Biol       Date:  2021

3.  Identification and characterization of circular RNAs during the sea buckthorn fruit development.

Authors:  Guoyun Zhang; Songfeng Diao; Tong Zhang; Daoguo Chen; Caiyun He; Jianguo Zhang
Journal:  RNA Biol       Date:  2019-01-29       Impact factor: 4.652

4.  Circ-TFCP2L1 Promotes the Proliferation and Migration of Triple Negative Breast Cancer through Sponging miR-7 by Inhibiting PAK1.

Authors:  Qian Wang; Zhouxiao Li; Yun Hu; Wubin Zheng; Weiwei Tang; Changyuan Zhai; Zhutong Gu; Jing Tao; Hanjin Wang
Journal:  J Mammary Gland Biol Neoplasia       Date:  2019-11-27       Impact factor: 2.673

5.  Identification, characterization, and functional prediction of circular RNAs in maize.

Authors:  Yang Han; Xinxin Li; Yan Yan; Ming-Hua Duan; Jian-Hong Xu
Journal:  Mol Genet Genomics       Date:  2020-01-01       Impact factor: 3.291

Review 6.  A comprehensive overview and evaluation of circular RNA detection tools.

Authors:  Xiangxiang Zeng; Wei Lin; Maozu Guo; Quan Zou
Journal:  PLoS Comput Biol       Date:  2017-06-08       Impact factor: 4.475

7.  Chemoresistance in pancreatic cancer: Emerging concepts.

Authors:  Manu Gnanamony; Christopher S Gondi
Journal:  Oncol Lett       Date:  2017-02-24       Impact factor: 2.967

Review 8.  Roles of circular RNAs in regulating the development of glioma.

Authors:  Jianing Fan; Yangyang Wang; Xiao Liang; Fanlin Zhou; Shijie Li; Xiaoju Li; Yu Li
Journal:  J Cancer Res Clin Oncol       Date:  2022-07-01       Impact factor: 4.553

9.  The Use of circRNAs as Biomarkers of Cancer.

Authors:  Carla Solé; Gartze Mentxaka; Charles H Lawrie
Journal:  Methods Mol Biol       Date:  2021

10.  The decreased expression of hsa_circ_0043278 and its relationship with clinicopathological features of breast cancer.

Authors:  Chong Liu; Tao Han; Yue Shi
Journal:  Gland Surg       Date:  2020-12
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