Literature DB >> 26908011

The biogenesis and emerging roles of circular RNAs.

Ling-Ling Chen1.   

Abstract

Circular RNAs (circRNAs) are produced from precursor mRNA (pre-mRNA) back-splicing of thousands of genes in eukaryotes. Although circRNAs are generally expressed at low levels, recent findings have shed new light on their cell type-specific and tissue-specific expression and on the regulation of their biogenesis. Furthermore, the data indicate that circRNAs shape gene expression by titrating microRNAs, regulating transcription and interfering with splicing, thus effectively expanding the diversity and complexity of eukaryotic transcriptomes.

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Year:  2016        PMID: 26908011     DOI: 10.1038/nrm.2015.32

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  63 in total

1.  Scrambled exons.

Authors:  J M Nigro; K R Cho; E R Fearon; S E Kern; J M Ruppert; J D Oliner; K W Kinzler; B Vogelstein
Journal:  Cell       Date:  1991-02-08       Impact factor: 41.582

2.  Circular RNA is enriched and stable in exosomes: a promising biomarker for cancer diagnosis.

Authors:  Yan Li; Qiupeng Zheng; Chunyang Bao; Shuyi Li; Weijie Guo; Jiang Zhao; Di Chen; Jianren Gu; Xianghuo He; Shenglin Huang
Journal:  Cell Res       Date:  2015-07-03       Impact factor: 25.617

3.  Circular RNAs in the Mammalian Brain Are Highly Abundant, Conserved, and Dynamically Expressed.

Authors:  Agnieszka Rybak-Wolf; Christin Stottmeister; Petar Glažar; Marvin Jens; Natalia Pino; Sebastian Giusti; Mor Hanan; Mikaela Behm; Osnat Bartok; Reut Ashwal-Fluss; Margareta Herzog; Luisa Schreyer; Panagiotis Papavasileiou; Andranik Ivanov; Marie Öhman; Damian Refojo; Sebastian Kadener; Nikolaus Rajewsky
Journal:  Mol Cell       Date:  2015-04-23       Impact factor: 17.970

4.  Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.

Authors:  Alfredo Castello; Bernd Fischer; Katrin Eichelbaum; Rastislav Horos; Benedikt M Beckmann; Claudia Strein; Norman E Davey; David T Humphreys; Thomas Preiss; Lars M Steinmetz; Jeroen Krijgsveld; Matthias W Hentze
Journal:  Cell       Date:  2012-05-31       Impact factor: 41.582

5.  Circular intronic long noncoding RNAs.

Authors:  Yang Zhang; Xiao-Ou Zhang; Tian Chen; Jian-Feng Xiang; Qing-Fei Yin; Yu-Hang Xing; Shanshan Zhu; Li Yang; Ling-Ling Chen
Journal:  Mol Cell       Date:  2013-09-12       Impact factor: 17.970

6.  Single-cell RNA-seq transcriptome analysis of linear and circular RNAs in mouse preimplantation embryos.

Authors:  Xiaoying Fan; Xiannian Zhang; Xinglong Wu; Hongshan Guo; Yuqiong Hu; Fuchou Tang; Yanyi Huang
Journal:  Genome Biol       Date:  2015-07-23       Impact factor: 13.583

7.  Transcriptome-wide investigation of circular RNAs in rice.

Authors:  Tingting Lu; Lingling Cui; Yan Zhou; Chuanrang Zhu; Danlin Fan; Hao Gong; Qiang Zhao; Congcong Zhou; Yan Zhao; Danfeng Lu; Jianghong Luo; Yongchun Wang; Qilin Tian; Qi Feng; Tao Huang; Bin Han
Journal:  RNA       Date:  2015-10-13       Impact factor: 4.942

8.  Inhibition of RNA lariat debranching enzyme suppresses TDP-43 toxicity in ALS disease models.

Authors:  Maria Armakola; Matthew J Higgins; Matthew D Figley; Sami J Barmada; Emily A Scarborough; Zamia Diaz; Xiaodong Fang; James Shorter; Nevan J Krogan; Steven Finkbeiner; Robert V Farese; Aaron D Gitler
Journal:  Nat Genet       Date:  2012-10-28       Impact factor: 38.330

9.  Lariat intronic RNAs in the cytoplasm of Xenopus tropicalis oocytes.

Authors:  Gaëlle J S Talhouarne; Joseph G Gall
Journal:  RNA       Date:  2014-07-22       Impact factor: 4.942

10.  Combinatorial control of Drosophila circular RNA expression by intronic repeats, hnRNPs, and SR proteins.

Authors:  Marianne C Kramer; Dongming Liang; Deirdre C Tatomer; Beth Gold; Zachary M March; Sara Cherry; Jeremy E Wilusz
Journal:  Genes Dev       Date:  2015-10-08       Impact factor: 11.361

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  589 in total

1.  Investigation of circular RNAs in an ectoparasitic mite Varroa destructor (Acarina: Varroidae) of the honey bee.

Authors:  Zheguang Lin; Hao Xu; Xiaoling Su; Yalu Ke; Wei Wang; Yujiao Li; Mingliang Zhuang; Heng Chen; Yibing Liu; Kang Wang; Guohong Chen; Ting Ji
Journal:  Parasitol Res       Date:  2021-01-16       Impact factor: 2.289

2.  Circular RNA circHIPK3 modulates autophagy via MIR124-3p-STAT3-PRKAA/AMPKα signaling in STK11 mutant lung cancer.

Authors:  Xiuyuan Chen; Rui Mao; Wenmei Su; Xia Yang; Qianqian Geng; Chunfang Guo; Zhuwen Wang; Jun Wang; Laura A Kresty; David G Beer; Andrew C Chang; Guoan Chen
Journal:  Autophagy       Date:  2019-06-28       Impact factor: 16.016

3.  Novel tumour suppressive protein encoded by circular RNA, circ-SHPRH, in glioblastomas.

Authors:  S Begum; A Yiu; J Stebbing; L Castellano
Journal:  Oncogene       Date:  2018-04-30       Impact factor: 9.867

4.  Hsa_circ_0033155: A potential novel biomarker for non-small cell lung cancer.

Authors:  Xiaohua Gu; Gang Wang; Hui Shen; Xiaoyun Fei
Journal:  Exp Ther Med       Date:  2018-08-02       Impact factor: 2.447

Review 5.  Non-coding RNAs: key regulators of smooth muscle cell fate in vascular disease.

Authors:  Nicholas J Leeper; Lars Maegdefessel
Journal:  Cardiovasc Res       Date:  2018-03-15       Impact factor: 10.787

6.  The differential expression of novel circular RNAs in an acute lung injury rat model caused by smoke inhalation.

Authors:  Zhiqiang Ye; Xuhui Liu; Yuewu Yang; Xianling Zhang; Ting Yu; Shigeng Li; Yawei Feng; Gangjian Luo
Journal:  J Physiol Biochem       Date:  2017-11-29       Impact factor: 4.158

Review 7.  Posttranscriptional regulation of lipid metabolism by non-coding RNAs and RNA binding proteins.

Authors:  Abhishek K Singh; Binod Aryal; Xinbo Zhang; Yuhua Fan; Nathan L Price; Yajaira Suárez; Carlos Fernández-Hernando
Journal:  Semin Cell Dev Biol       Date:  2017-12-06       Impact factor: 7.727

Review 8.  How to stomach an epigenetic insult: the gastric cancer epigenome.

Authors:  Nisha Padmanabhan; Toshikazu Ushijima; Patrick Tan
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2017-05-17       Impact factor: 46.802

Review 9.  Circular RNAs and hereditary bone diseases.

Authors:  Naixiang Zhai; Yanqin Lu; Yanzhou Wang; Xiuzhi Ren; Jinxiang Han
Journal:  Intractable Rare Dis Res       Date:  2018-02

10.  Circular RNA 0006602 in plasma exosomes: a new potential diagnostic biomarker for hepatocellular carcinoma.

Authors:  Sen Guo; Chunxiao Hu; Xiangyu Zhai; Dong Sun
Journal:  Am J Transl Res       Date:  2021-06-15       Impact factor: 4.060

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