Literature DB >> 3066688

Mutations in elongation factor EF-1 alpha affect the frequency of frameshifting and amino acid misincorporation in Saccharomyces cerevisiae.

M G Sandbaken1, M R Culbertson.   

Abstract

A mutational analysis of the eukaryotic elongation factor EF-1 alpha indicates that this protein functions to limit the frequency of errors during genetic code translation. We found that both amino acid misincorporation and reading frame errors are controlled by EF-1 alpha. In order to examine the function of this protein, the TEF2 gene, which encodes EF-1 alpha in Saccharomyces cerevisiae, was mutagenized in vitro with hydroxylamine. Sixteen independent TEF2 alleles were isolated by their ability to suppress frameshift mutations. DNA sequence analysis identified eight different sites in the EF-1 alpha protein that elevate the frequency of mistranslation when mutated. These sites are located in two different regions of the protein. Amino acid substitutions located in or near the GTP-binding and hydrolysis domain of the protein cause suppression of frameshift and nonsense mutations. These mutations may effect mistranslation by altering the binding or hydrolysis of GTP. Amino acid substitutions located adjacent to a putative aminoacyl-tRNA binding region also suppress frameshift and nonsense mutations. These mutations may alter the binding of aminoacyl-tRNA by EF-1 alpha. The identification of frameshift and nonsense suppressor mutations in EF-1 alpha indicates a role for this protein in limiting amino acid misincorporation and reading frame errors. We suggest that these types of errors are controlled by a common mechanism or closely related mechanisms.

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Year:  1988        PMID: 3066688      PMCID: PMC1203584     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  46 in total

1.  tRNA anticodon replacement experiments show that ribosomal frameshifting can be caused by doublet decoding.

Authors:  A G Bruce; J F Atkins; R F Gesteland
Journal:  Proc Natl Acad Sci U S A       Date:  1986-07       Impact factor: 11.205

Review 2.  Genetic map of Saccharomyces cerevisiae, edition 9.

Authors:  R K Mortimer; D Schild
Journal:  Microbiol Rev       Date:  1985-09

3.  Frameshift suppression in aminoacyl-tRNA limited cells.

Authors:  R B Weiss; J A Gallant
Journal:  Genetics       Date:  1986-04       Impact factor: 4.562

4.  A comprehensive set of sequence analysis programs for the VAX.

Authors:  J Devereux; P Haeberli; O Smithies
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

5.  Partial suppression of an ochre mutation in Saccharomyces cerevisiae by multicopy plasmids containing a normal yeast tRNAGln gene.

Authors:  G A Pure; G W Robinson; L Naumovski; E C Friedberg
Journal:  J Mol Biol       Date:  1985-05-05       Impact factor: 5.469

6.  Structure of the GDP domain of EF-Tu and location of the amino acids homologous to ras oncogene proteins.

Authors:  F Jurnak
Journal:  Science       Date:  1985-10-04       Impact factor: 47.728

7.  The reaction of ribosomes with elongation factor Tu.GTP complexes. Aminoacyl-tRNA-independent reactions in the elongation cycle determine the accuracy of protein synthesis.

Authors:  R C Thompson; D B Dix; A M Karim
Journal:  J Biol Chem       Date:  1986-04-15       Impact factor: 5.157

8.  A second tRNA binding site on elongation factor Tu is induced while the factor is bound to the ribosome.

Authors:  J M Van Noort; B Kraal; L Bosch
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

9.  Identification of two genes coding for the translation elongation factor EF-1 alpha of S. cerevisiae.

Authors:  F Schirmaier; P Philippsen
Journal:  EMBO J       Date:  1984-12-20       Impact factor: 11.598

10.  Mutants of the elongation factor EF-Tu, a new class of nonsense suppressors.

Authors:  E Vijgenboom; T Vink; B Kraal; L Bosch
Journal:  EMBO J       Date:  1985-04       Impact factor: 11.598

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  57 in total

1.  Translational suppressors and antisuppressors alter the efficiency of the Ty1 programmed translational frameshift.

Authors:  C L Burck; Y O Chernoff; R Liu; P J Farabaugh; S W Liebman
Journal:  RNA       Date:  1999-11       Impact factor: 4.942

2.  eEF1A Controls ascospore differentiation through elevated accuracy, but controls longevity and fruiting body formation through another mechanism in Podospora anserina.

Authors:  P Silar; H Lalucque; V Haedens; D Zickler; M Picard
Journal:  Genetics       Date:  2001-08       Impact factor: 4.562

3.  Elongation factor EF-1 alpha gene dosage alters translational fidelity in Saccharomyces cerevisiae.

Authors:  J M Song; S Picologlou; C M Grant; M Firoozan; M F Tuite; S Liebman
Journal:  Mol Cell Biol       Date:  1989-10       Impact factor: 4.272

4.  Navigating without a road map.

Authors:  Michael R Culbertson
Journal:  Genetics       Date:  2007-09       Impact factor: 4.562

Review 5.  A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment.

Authors:  John F Atkins; Glenn R Björk
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

Review 6.  Modulation of efficiency of translation termination in Saccharomyces cerevisiae.

Authors:  Anton A Nizhnikov; Kirill S Antonets; Sergey G Inge-Vechtomov; Irina L Derkatch
Journal:  Prion       Date:  2014-11-01       Impact factor: 3.931

7.  Identification of the human prostatic carcinoma oncogene PTI-1 by rapid expression cloning and differential RNA display.

Authors:  R Shen; Z Z Su; C A Olsson; P B Fisher
Journal:  Proc Natl Acad Sci U S A       Date:  1995-07-18       Impact factor: 11.205

8.  Synthetic lethality between eIF5A and Ypt1 reveals a connection between translation and the secretory pathway in yeast.

Authors:  Mariana C Frigieri; Marcus V S João Luiz; Luciano H Apponi; Cleslei F Zanelli; Sandro R Valentini
Journal:  Mol Genet Genomics       Date:  2008-06-21       Impact factor: 3.291

9.  ZDS1 and ZDS2, genes whose products may regulate Cdc42p in Saccharomyces cerevisiae.

Authors:  E Bi; J R Pringle
Journal:  Mol Cell Biol       Date:  1996-10       Impact factor: 4.272

10.  Translation elongation factor 1A mutants with altered actin bundling activity show reduced aminoacyl-tRNA binding and alter initiation via eIF2α phosphorylation.

Authors:  Winder B Perez; Terri Goss Kinzy
Journal:  J Biol Chem       Date:  2014-07-25       Impact factor: 5.157

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