Literature DB >> 3514372

Frameshift suppression in aminoacyl-tRNA limited cells.

R B Weiss, J A Gallant.   

Abstract

Under certain conditions aminoacyl-tRNA limitation can phenotypically suppress frameshift alleles. The observed suppression is due to an increase in abnormal translocation of ribosomes translating codons that have a short supply of aminoacyl-tRNA. The rIIB frameshift alleles of bacteriophage T4 are used here to pinpoint the sites of ribosome frameshifting caused by these hypothetical decoding errors. The data indicate that not all hungry codons are associated with abnormal translocation, only a relatively small subset. Analysis of the hungry codons which are associated with ribosome frameshifting points to the existence of severe context effects determining the shiftiness of these codons.

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Year:  1986        PMID: 3514372      PMCID: PMC1202773     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  9 in total

1.  General nature of the genetic code for proteins.

Authors:  F H CRICK; L BARNETT; S BRENNER; R J WATTS-TOBIN
Journal:  Nature       Date:  1961-12-30       Impact factor: 49.962

2.  The influence of the reading context upon the suppression of nonsense codons.

Authors:  M M Fluck; W Salser; R H Epstein
Journal:  Mol Gen Genet       Date:  1977-03-07

3.  Normal tRNAs promote ribosomal frameshifting.

Authors:  J F Atkins; R F Gesteland; B R Reid; C W Anderson
Journal:  Cell       Date:  1979-12       Impact factor: 41.582

4.  Bacterial peptide chain release factors: conserved primary structure and possible frameshift regulation of release factor 2.

Authors:  W J Craigen; R G Cook; W P Tate; C T Caskey
Journal:  Proc Natl Acad Sci U S A       Date:  1985-06       Impact factor: 11.205

5.  Nonsense suppression in aminoacyl-t-RNA limited cells.

Authors:  J Gallant; H Erlich; R Weiss; L Palmer; L Nyari
Journal:  Mol Gen Genet       Date:  1982

6.  rII cistrons of bacteriophage T4. DNA sequence around the intercistronic divide and positions of genetic landmarks.

Authors:  D Pribnow; D C Sigurdson; L Gold; B S Singer; C Napoli; J Brosius; T J Dull; H F Noller
Journal:  J Mol Biol       Date:  1981-07-05       Impact factor: 5.469

7.  Codon context effects in missense suppression.

Authors:  E J Murgola; F T Pagel; K A Hijazi
Journal:  J Mol Biol       Date:  1984-05-05       Impact factor: 5.469

8.  An effect of codon context on the mistranslation of UGU codons in vitro.

Authors:  M J Carrier; R H Buckingham
Journal:  J Mol Biol       Date:  1984-05-05       Impact factor: 5.469

9.  Mechanism of ribosome frameshifting during translation of the genetic code.

Authors:  R Weiss; J Gallant
Journal:  Nature       Date:  1983 Mar 31-Apr 6       Impact factor: 49.962

  9 in total
  18 in total

Review 1.  How translational accuracy influences reading frame maintenance.

Authors:  P J Farabaugh; G R Björk
Journal:  EMBO J       Date:  1999-03-15       Impact factor: 11.598

2.  Imbalance of tRNA(Pro) isoacceptors induces +1 frameshifting at near-cognate codons.

Authors:  Michael O'Connor
Journal:  Nucleic Acids Res       Date:  2002-02-01       Impact factor: 16.971

3.  Transfer RNA modifications that alter +1 frameshifting in general fail to affect -1 frameshifting.

Authors:  Jaunius Urbonavicius; Guillaume Stahl; Jérôme M B Durand; Samia N Ben Salem; Qiang Qian; Philip J Farabaugh; Glenn R Björk
Journal:  RNA       Date:  2003-06       Impact factor: 4.942

Review 4.  A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment.

Authors:  John F Atkins; Glenn R Björk
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

Review 5.  The pleiotropic cell separation mutation spl1-1 is a nucleotide substitution in the internal promoter of the proline tRNACGG gene of Schizosaccharomyces pombe.

Authors:  Ida Miklos; Katalin Ludanyi; Matthias Sipiczki
Journal:  Curr Genet       Date:  2009-07-28       Impact factor: 3.886

Review 6.  Programmed translational frameshifting.

Authors:  P J Farabaugh
Journal:  Microbiol Rev       Date:  1996-03

7.  Mutations in elongation factor EF-1 alpha affect the frequency of frameshifting and amino acid misincorporation in Saccharomyces cerevisiae.

Authors:  M G Sandbaken; M R Culbertson
Journal:  Genetics       Date:  1988-12       Impact factor: 4.562

Review 8.  Errors and alternatives in reading the universal genetic code.

Authors:  J Parker
Journal:  Microbiol Rev       Date:  1989-09

9.  On the directional specificity of ribosome frameshifting at a "hungry" codon.

Authors:  D Lindsley; J Gallant
Journal:  Proc Natl Acad Sci U S A       Date:  1993-06-15       Impact factor: 11.205

10.  crl mutants of Saccharomyces cerevisiae resemble both mutants affecting general control of amino acid biosynthesis and omnipotent translational suppressor mutants.

Authors:  J H McCusker; J E Haber
Journal:  Genetics       Date:  1988-06       Impact factor: 4.562

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