Literature DB >> 3926487

Mutants of the elongation factor EF-Tu, a new class of nonsense suppressors.

E Vijgenboom, T Vink, B Kraal, L Bosch.   

Abstract

Read-through of nonsense codons has been studied in wild-type Escherichia coli cells and in cells harbouring mutant species of the elongation factor EF-Tu. The two phenomena differ essentially. Readthrough of UGA in wild-type cells is reduced by inactivation of tufB but is restored to the original level by introducing into the cell plasmid-borne EF-Tu. This shows that the natural UGA leakiness is dependent on the intracellular concentration of EF-Tu. Strains of E. coli harbouring mutant species of the elongation factor EF-Tu suppress the nonsense codons UAG, UAA and UGA. Suppression shows a codon context dependence. It requires the combined action of two different EF-Tu species: EF-TuAR(Ala 375----Thr) and EF-TuBo(Gly 222----Asp). Cells harbouring EF-TuAR(Ala 375----Thr) and wild-type EF-TuB, or wild-type EF-TuA and EF-TuBo(Gly 222----Asp) do not display suppressor activity. These data demonstrate that mutated tuf genes form an additional class of nonsense suppressors. The requirement for two different mutant EF-Tu species raises the question whether translation of sense codons also occurs by the combined action of two EF-Tu molecules on the ribosome.

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Year:  1985        PMID: 3926487      PMCID: PMC554298          DOI: 10.1002/j.1460-2075.1985.tb03737.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  20 in total

1.  beta-Galactosidase chimeras: primary structure of a lac repressor-beta-galactosidase protein.

Authors:  A J Brake; A V Fowler; I Zabin; J Kania; B Müller-Hill
Journal:  Proc Natl Acad Sci U S A       Date:  1978-10       Impact factor: 11.205

2.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

Review 3.  The role of guanosine 5'-triphosphate in polypeptide chain elongation.

Authors:  Y Kaziro
Journal:  Biochim Biophys Acta       Date:  1978-09-21

4.  Correlation of nonsense sites in the lacI gene with specific codons in the nucleotide sequence.

Authors:  J H Miller; C Coulondre; P J Farabaugh
Journal:  Nature       Date:  1978-08-24       Impact factor: 49.962

5.  Transformation of Salmonella typhimurium by plasmid deoxyribonucleic acid.

Authors:  E M Lederberg; S N Cohen
Journal:  J Bacteriol       Date:  1974-09       Impact factor: 3.490

6.  Lac repressor can be fused to beta-galactosidase.

Authors:  B Müller-Hill; J Kania
Journal:  Nature       Date:  1974-06-07       Impact factor: 49.962

7.  Content of elongation factor Tu in Escherichia coli.

Authors:  A V Furano
Journal:  Proc Natl Acad Sci U S A       Date:  1975-12       Impact factor: 11.205

8.  Elongation factor Tu can reduce translation errors in poly(U)-directed cell-free systems.

Authors:  L P Gavrilova; I N Perminova; A S Spirin
Journal:  J Mol Biol       Date:  1981-06-15       Impact factor: 5.469

9.  Structural features of the GDP binding site of elongation factor Tu from Escherichia coli as determined by x-ray diffraction.

Authors:  J R Rubin; K Morikawa; J Nyborg; T F la Cour; B F Clark; D L Miller
Journal:  FEBS Lett       Date:  1981-06-29       Impact factor: 4.124

10.  Translational reinitiation: reinitiation of lac repressor fragments at three internal sites early in the lac i gene of Escherichia coli.

Authors:  J G Files; K Weber; J H Miller
Journal:  Proc Natl Acad Sci U S A       Date:  1974-03       Impact factor: 11.205

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  25 in total

Review 1.  Suppression and the code: beyond codons and anticodons.

Authors:  E J Murgola
Journal:  Experientia       Date:  1990-12-01

2.  Elongation factor EF-1 alpha gene dosage alters translational fidelity in Saccharomyces cerevisiae.

Authors:  J M Song; S Picologlou; C M Grant; M Firoozan; M F Tuite; S Liebman
Journal:  Mol Cell Biol       Date:  1989-10       Impact factor: 4.272

3.  Suppression of the Escherichia coli rpoH opal mutation by ribosomes lacking S15 protein.

Authors:  R Yano; T Yura
Journal:  J Bacteriol       Date:  1989-03       Impact factor: 3.490

4.  The G222D mutation in elongation factor Tu inhibits the codon-induced conformational changes leading to GTPase activation on the ribosome.

Authors:  E Vorstenbosch; T Pape; M V Rodnina; B Kraal; W Wintermeyer
Journal:  EMBO J       Date:  1996-12-02       Impact factor: 11.598

Review 5.  Transfer ribonucleic acid-mediated suppression of termination codons in Escherichia coli.

Authors:  G Eggertsson; D Söll
Journal:  Microbiol Rev       Date:  1988-09

6.  GTPase center of elongation factor Tu is activated by occupation of the second tRNA binding site.

Authors:  J M Van Noort; B Kraal; L Bosch
Journal:  Proc Natl Acad Sci U S A       Date:  1986-07       Impact factor: 11.205

7.  Mutations in elongation factor EF-1 alpha affect the frequency of frameshifting and amino acid misincorporation in Saccharomyces cerevisiae.

Authors:  M G Sandbaken; M R Culbertson
Journal:  Genetics       Date:  1988-12       Impact factor: 4.562

8.  Release factor competition is equivalent at strong and weakly suppressed nonsense codons.

Authors:  R Martin; M Hearn; P Jenny; J Gallant
Journal:  Mol Gen Genet       Date:  1988-07

9.  The allosuppressor gene SAL4 encodes a protein important for maintaining translational fidelity in Saccharomyces cerevisiae.

Authors:  M Crouzet; F Izgu; C M Grant; M F Tuite
Journal:  Curr Genet       Date:  1988-12       Impact factor: 3.886

10.  Isolation of omnipotent suppressors in an [eta+] yeast strain.

Authors:  J A All-Robyn; D Kelley-Geraghty; E Griffin; N Brown; S W Liebman
Journal:  Genetics       Date:  1990-03       Impact factor: 4.562

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