Literature DB >> 30561344

DukeSim: A Realistic, Rapid, and Scanner-Specific Simulation Framework in Computed Tomography.

Ehsan Abadi, Brian Harrawood, Shobhit Sharma, Anuj Kapadia, William P Segars, Ehsan Samei.   

Abstract

The purpose of this study was to develop a CT simulation platform that is: 1) compatible with voxel-based computational phantoms; 2) capable of modeling the geometry and physics of commercial CT scanners; and 3) computationally efficient. Such a simulation platform is designed to enable the virtual evaluation and optimization of CT protocols and parameters for achieving a targeted image quality while reducing radiation dose. Given a voxelized computational phantom and a parameter file describing the desired scanner and protocol, the developed platform DukeSim calculates projection images using a combination of ray-tracing and Monte Carlo techniques. DukeSim includes detailed models for the detector quantum efficiency, quantum and electronic noise, detector crosstalk, subsampling of the detector and focal spot areas, focal spot wobbling, and the bowtie filter. DukeSim was accelerated using GPU computing. The platform was validated using physical and computational versions of a phantom (Mercury phantom). Clinical and simulated CT scans of the phantom were acquired at multiple dose levels using a commercial CT scanner (Somatom Definition Flash; Siemens Healthcare). The real and simulated images were compared in terms of image contrast, noise magnitude, noise texture, and spatial resolution. The relative error between the clinical and simulated images was less than 1.4%, 0.5%, 2.6%, and 3%, for image contrast, noise magnitude, noise texture, and spatial resolution, respectively, demonstrating the high realism of DukeSim. The runtime, dependent on the imaging task and the hardware, was approximately 2-3 minutes per rotation in our study using a computer with 4 GPUs. DukeSim, when combined with realistic human phantoms, provides the necessary toolset with which to perform large-scale and realistic virtual clinical trials in a patient and scanner-specific manner.

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Year:  2018        PMID: 30561344      PMCID: PMC6598436          DOI: 10.1109/TMI.2018.2886530

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  26 in total

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Journal:  Phys Med Biol       Date:  2004-06-07       Impact factor: 3.609

2.  Chinese visible human project.

Authors:  Shao-Xiang Zhang; Pheng-Ann Heng; Zheng-Jin Liu
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3.  Development and characterization of an anthropomorphic breast software phantom based upon region-growing algorithm.

Authors:  Predrag R Bakic; Cuiping Zhang; Andrew D A Maidment
Journal:  Med Phys       Date:  2011-06       Impact factor: 4.071

4.  A methodology for image quality evaluation of advanced CT systems.

Authors:  Joshua M Wilson; Olav I Christianson; Samuel Richard; Ehsan Samei
Journal:  Med Phys       Date:  2013-03       Impact factor: 4.071

Review 5.  Objective assessment of image quality and dose reduction in CT iterative reconstruction.

Authors:  J Y Vaishnav; W C Jung; L M Popescu; R Zeng; K J Myers
Journal:  Med Phys       Date:  2014-07       Impact factor: 4.071

6.  Technical Note: FreeCT_wFBP: A robust, efficient, open-source implementation of weighted filtered backprojection for helical, fan-beam CT.

Authors:  John Hoffman; Stefano Young; Frédéric Noo; Michael McNitt-Gray
Journal:  Med Phys       Date:  2016-03       Impact factor: 4.071

7.  Development of realistic physical breast phantoms matched to virtual breast phantoms based on human subject data.

Authors:  Nooshin Kiarashi; Adam C Nolte; Gregory M Sturgeon; William P Segars; Sujata V Ghate; Loren W Nolte; Ehsan Samei; Joseph Y Lo
Journal:  Med Phys       Date:  2015-07       Impact factor: 4.071

8.  The Virtual Family--development of surface-based anatomical models of two adults and two children for dosimetric simulations.

Authors:  Andreas Christ; Wolfgang Kainz; Eckhart G Hahn; Katharina Honegger; Marcel Zefferer; Esra Neufeld; Wolfgang Rascher; Rolf Janka; Werner Bautz; Ji Chen; Berthold Kiefer; Peter Schmitt; Hans-Peter Hollenbach; Jianxiang Shen; Michael Oberle; Dominik Szczerba; Anthony Kam; Joshua W Guag; Niels Kuster
Journal:  Phys Med Biol       Date:  2009-12-17       Impact factor: 3.609

9.  Realistic CT simulation using the 4D XCAT phantom.

Authors:  W P Segars; M Mahesh; T J Beck; E C Frey; B M W Tsui
Journal:  Med Phys       Date:  2008-08       Impact factor: 4.071

10.  Physical characterization of a new CT iterative reconstruction method operating in sinogram space.

Authors:  Caterina Ghetti; Francesca Palleri; Giulio Serreli; Ornella Ortenzia; Livia Ruffini
Journal:  J Appl Clin Med Phys       Date:  2013-07-08       Impact factor: 2.102

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  13 in total

1.  A real-time Monte Carlo tool for individualized dose estimations in clinical CT.

Authors:  Shobhit Sharma; Anuj Kapadia; Wanyi Fu; Ehsan Abadi; W Paul Segars; Ehsan Samei
Journal:  Phys Med Biol       Date:  2019-11-04       Impact factor: 3.609

2.  Virtual clinical trial for quantifying the effects of beam collimation and pitch on image quality in computed tomography.

Authors:  Ehsan Abadi; William P Segars; Brian Harrawood; Shobhit Sharma; Anuj Kapadia; Ehsan Samei
Journal:  J Med Imaging (Bellingham)       Date:  2020-06-01

3.  Development of a scanner-specific simulation framework for photon-counting computed tomography.

Authors:  Ehsan Abadi; Brian Harrawood; Jayasai R Rajagopal; Shobhit Sharma; Anuj Kapadia; William Paul Segars; Karl Stierstorfer; Martin Sedlmair; Elizabeth Jones; Ehsan Samei
Journal:  Biomed Phys Eng Express       Date:  2019-08-09

4.  A scanner-specific framework for simulating CT images with tube current modulation.

Authors:  Giavanna Jadick; Ehsan Abadi; Brian Harrawood; Shobhit Sharma; W Paul Segars; Ehsan Samei
Journal:  Phys Med Biol       Date:  2021-09-13       Impact factor: 3.609

5.  Scanner-specific validation of a CT simulator using a COPD-emulated anthropomorphic phantom.

Authors:  Sachin S Shankar; Giavanna L Jadick; Eric A Hoffman; Jarron Atha; Jessica C Sieren; Ehsan Samei; Ehsan Abadi
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2022-04-04

6.  Photon-counting CT versus conventional CT for COPD quantifications: intra-scanner optimization and inter-scanner assessments using virtual imaging trials.

Authors:  Saman Sotoudeh-Paima; W Paul Segars; Ehsan Samei; Ehsan Abadi
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2022-04-04

7.  Development and Clinical Applications of a Virtual Imaging Framework for Optimizing Photon-counting CT.

Authors:  Ehsan Abadi; Cindy McCabe; Brian Harrawood; Saman Sotoudeh-Paima; W Paul Segars; Ehsan Samei
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2022-04-04

8.  Semiempirical, parameterized spectrum estimation for x-ray computed tomography.

Authors:  Paul FitzGerald; Stephen Araujo; Mingye Wu; Bruno De Man
Journal:  Med Phys       Date:  2021-03-16       Impact factor: 4.071

9.  Correction for Systematic Bias in Radiomics Measurements Due to Variation in Imaging Protocols.

Authors:  Jocelyn Hoye; Taylor Smith; Ehsan Abadi; Justin B Solomon; Ehsan Samei
Journal:  Acad Radiol       Date:  2021-06-13       Impact factor: 5.482

10.  Lung nodule detection in chest X-rays using synthetic ground-truth data comparing CNN-based diagnosis to human performance.

Authors:  Manuel Schultheiss; Philipp Schmette; Jannis Bodden; Juliane Aichele; Christina Müller-Leisse; Felix G Gassert; Florian T Gassert; Joshua F Gawlitza; Felix C Hofmann; Daniel Sasse; Claudio E von Schacky; Sebastian Ziegelmayer; Fabio De Marco; Bernhard Renger; Marcus R Makowski; Franz Pfeiffer; Daniela Pfeiffer
Journal:  Sci Rep       Date:  2021-08-04       Impact factor: 4.379

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