Literature DB >> 30506124

A Deep Learning-Based Approach for the Detection and Localization of Prostate Cancer in T2 Magnetic Resonance Images.

Ruba Alkadi1, Fatma Taher2, Ayman El-Baz3, Naoufel Werghi2.   

Abstract

We address the problem of prostate lesion detection, localization, and segmentation in T2W magnetic resonance (MR) images. We train a deep convolutional encoder-decoder architecture to simultaneously segment the prostate, its anatomical structure, and the malignant lesions. To incorporate the 3D contextual spatial information provided by the MRI series, we propose a novel 3D sliding window approach, which preserves the 2D domain complexity while exploiting 3D information. Experiments on data from 19 patients provided for the public by the Initiative for Collaborative Computer Vision Benchmarking (I2CVB) show that our approach outperforms traditional pattern recognition and machine learning approaches by a significant margin. Particularly, for the task of cancer detection and localization, the system achieves an average AUC of 0.995, an accuracy of 0.894, and a recall of 0.928. The proposed mono-modal deep learning-based system performs comparably to other multi-modal MR-based systems. It could improve the performance of a radiologist in prostate cancer diagnosis and treatment planning.

Entities:  

Keywords:  Deep convolutional encoder-decoder; Magnetic resonance imaging; Prostate cancer

Mesh:

Year:  2019        PMID: 30506124      PMCID: PMC6737129          DOI: 10.1007/s10278-018-0160-1

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.056


  25 in total

1.  Detection of prostate cancer by integration of line-scan diffusion, T2-mapping and T2-weighted magnetic resonance imaging; a multichannel statistical classifier.

Authors:  Ian Chan; William Wells; Robert V Mulkern; Steven Haker; Jianqing Zhang; Kelly H Zou; Stephan E Maier; Clare M C Tempany
Journal:  Med Phys       Date:  2003-09       Impact factor: 4.071

2.  A comprehensive segmentation, registration, and cancer detection scheme on 3 Tesla in vivo prostate DCE-MRI.

Authors:  Satish Viswanath; B Nicolas Bloch; Elisabeth Genega; Neil Rofsky; Robert Lenkinski; Jonathan Chappelow; Robert Toth; Anant Madabhushi
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

3.  A hierarchical spectral clustering and nonlinear dimensionality reduction scheme for detection of prostate cancer from magnetic resonance spectroscopy (MRS).

Authors:  Pallavi Tiwari; Mark Rosen; Anant Madabhushi
Journal:  Med Phys       Date:  2009-09       Impact factor: 4.071

4.  Automatic computer-aided detection of prostate cancer based on multiparametric magnetic resonance image analysis.

Authors:  P C Vos; J O Barentsz; N Karssemeijer; H J Huisman
Journal:  Phys Med Biol       Date:  2012-03-06       Impact factor: 3.609

5.  Multi-kernel graph embedding for detection, Gleason grading of prostate cancer via MRI/MRS.

Authors:  Pallavi Tiwari; John Kurhanewicz; Anant Madabhushi
Journal:  Med Image Anal       Date:  2012-12-13       Impact factor: 8.545

6.  Multimodal wavelet embedding representation for data combination (MaWERiC): integrating magnetic resonance imaging and spectroscopy for prostate cancer detection.

Authors:  P Tiwari; S Viswanath; J Kurhanewicz; A Sridhar; A Madabhushi
Journal:  NMR Biomed       Date:  2011-09-30       Impact factor: 4.044

7.  N4ITK: improved N3 bias correction.

Authors:  Nicholas J Tustison; Brian B Avants; Philip A Cook; Yuanjie Zheng; Alexander Egan; Paul A Yushkevich; James C Gee
Journal:  IEEE Trans Med Imaging       Date:  2010-04-08       Impact factor: 10.048

8.  Central gland and peripheral zone prostate tumors have significantly different quantitative imaging signatures on 3 Tesla endorectal, in vivo T2-weighted MR imagery.

Authors:  Satish E Viswanath; Nicholas B Bloch; Jonathan C Chappelow; Robert Toth; Neil M Rofsky; Elizabeth M Genega; Robert E Lenkinski; Anant Madabhushi
Journal:  J Magn Reson Imaging       Date:  2012-02-15       Impact factor: 4.813

9.  Computerized characterization of prostate cancer by fractal analysis in MR images.

Authors:  Dongjiao Lv; Xuemei Guo; Xiaoying Wang; Jue Zhang; Jing Fang
Journal:  J Magn Reson Imaging       Date:  2009-07       Impact factor: 4.813

10.  Computer-assisted diagnosis of prostate cancer using DCE-MRI data: design, implementation and preliminary results.

Authors:  Philippe Puech; Nacim Betrouni; Nasr Makni; Anne-Sophie Dewalle; Arnauld Villers; Laurent Lemaitre
Journal:  Int J Comput Assist Radiol Surg       Date:  2008-10-21       Impact factor: 2.924

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  18 in total

1.  Artificial intelligence is a promising prospect for the detection of prostate cancer extracapsular extension with mpMRI: a two-center comparative study.

Authors:  Ying Hou; Yi-Hong Zhang; Jie Bao; Mei-Ling Bao; Guang Yang; Hai-Bin Shi; Yang Song; Yu-Dong Zhang
Journal:  Eur J Nucl Med Mol Imaging       Date:  2021-05-21       Impact factor: 9.236

Review 2.  Artificial intelligence at the intersection of pathology and radiology in prostate cancer.

Authors:  Stephnie A Harmon; Sena Tuncer; Thomas Sanford; Peter L Choyke; Barış Türkbey
Journal:  Diagn Interv Radiol       Date:  2019-05       Impact factor: 2.630

3.  Selective identification and localization of indolent and aggressive prostate cancers via CorrSigNIA: an MRI-pathology correlation and deep learning framework.

Authors:  Indrani Bhattacharya; Arun Seetharaman; Christian Kunder; Wei Shao; Leo C Chen; Simon J C Soerensen; Jeffrey B Wang; Nikola C Teslovich; Richard E Fan; Pejman Ghanouni; James D Brooks; Geoffrey A Sonn; Mirabela Rusu
Journal:  Med Image Anal       Date:  2021-11-06       Impact factor: 8.545

4.  Deep learning for fully automated tumor segmentation and extraction of magnetic resonance radiomics features in cervical cancer.

Authors:  Yu-Chun Lin; Chia-Hung Lin; Hsin-Ying Lu; Hsin-Ju Chiang; Ho-Kai Wang; Yu-Ting Huang; Shu-Hang Ng; Ji-Hong Hong; Tzu-Chen Yen; Chyong-Huey Lai; Gigin Lin
Journal:  Eur Radiol       Date:  2019-11-11       Impact factor: 5.315

5.  Interactive, Up-to-date Meta-Analysis of MRI in the Management of Men with Suspected Prostate Cancer.

Authors:  Anton S Becker; Julian Kirchner; Thomas Sartoretti; Soleen Ghafoor; Sungmin Woo; Chong Hyun Suh; Joseph P Erinjeri; Hedvig Hricak; H Alberto Vargas
Journal:  J Digit Imaging       Date:  2020-06       Impact factor: 4.056

6.  Prediction of Recurrence-associated Death from Localized Prostate Cancer with a Charlson Comorbidity Index-reinforced Machine Learning Model.

Authors:  Yi-Ting Lin; Michael Tian-Shyug Lee; Yen-Chun Huang; Chih-Kuang Liu; Yi-Tien Li; Mingchih Chen
Journal:  Open Med (Wars)       Date:  2019-08-14

Review 7.  Machine learning applications in prostate cancer magnetic resonance imaging.

Authors:  Renato Cuocolo; Maria Brunella Cipullo; Arnaldo Stanzione; Lorenzo Ugga; Valeria Romeo; Leonardo Radice; Arturo Brunetti; Massimo Imbriaco
Journal:  Eur Radiol Exp       Date:  2019-08-07

8.  Assessment of a Deep Learning Algorithm for the Detection of Rib Fractures on Whole-Body Trauma Computed Tomography.

Authors:  Thomas Weikert; Luca Andre Noordtzij; Jens Bremerich; Bram Stieltjes; Victor Parmar; Joshy Cyriac; Gregor Sommer; Alexander Walter Sauter
Journal:  Korean J Radiol       Date:  2020-07       Impact factor: 3.500

Review 9.  Artificial Intelligence Based Algorithms for Prostate Cancer Classification and Detection on Magnetic Resonance Imaging: A Narrative Review.

Authors:  Jasper J Twilt; Kicky G van Leeuwen; Henkjan J Huisman; Jurgen J Fütterer; Maarten de Rooij
Journal:  Diagnostics (Basel)       Date:  2021-05-26

10.  MRI-derived radiomics model for baseline prediction of prostate cancer progression on active surveillance.

Authors:  Nikita Sushentsev; Leonardo Rundo; Oleg Blyuss; Vincent J Gnanapragasam; Evis Sala; Tristan Barrett
Journal:  Sci Rep       Date:  2021-06-21       Impact factor: 4.379

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