| Literature DB >> 34155265 |
Nikita Sushentsev1, Leonardo Rundo2,3, Oleg Blyuss4,5,6, Vincent J Gnanapragasam7,8, Evis Sala2,3, Tristan Barrett2.
Abstract
Nearly half of patients with prostate cancer (PCa) harbour low- or intermediate-risk disease considered suitable for active surveillance (AS). However, up to 44% of patients discontinue AS within the first five years, highlighting the unmet clinical need for robust baseline risk-stratification tools that enable timely and accurate prediction of tumour progression. In this proof-of-concept study, we sought to investigate the added value of MRI-derived radiomic features to standard-of-care clinical parameters for improving baseline prediction of PCa progression in AS patients. Tumour T2-weighted imaging (T2WI) and apparent diffusion coefficient radiomic features were extracted, with rigorous calibration and pre-processing methods applied to select the most robust features for predictive modelling. Following leave-one-out cross-validation, the addition of T2WI-derived radiomic features to clinical variables alone improved the area under the ROC curve for predicting progression from 0.61 (95% confidence interval [CI] 0.481-0.743) to 0.75 (95% CI 0.64-0.86). These exploratory findings demonstrate the potential benefit of MRI-derived radiomics to add incremental benefit to clinical data only models in the baseline prediction of PCa progression on AS, paving the way for future multicentre studies validating the proposed model and evaluating its impact on clinical outcomes.Entities:
Year: 2021 PMID: 34155265 PMCID: PMC8217549 DOI: 10.1038/s41598-021-92341-6
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1Comparison of T2-weighted images of the prostate obtained at baseline pre-biopsy (a–c) and follow-up (d–f) mpMRI scans from patients enrolled on active surveillance. Images (a,d) were obtained from a patient with stable 3 + 3 = 6 disease that showed neither radiological not histopathological progression over a follow-up period of three years. Images (b,e) were obtained from a patient with both radiological (PRECISE 4) and histopathological (3 + 4 = 7 to 4 + 3 = 7) progression. Images (c,f) were obtained from a patient with confirmed histopathological progression (3 + 3 = 6 to 3 + 4 = 7) but radiologically stable disease (PRECISE 3). The best-performing predictive model (T2WI-derived radiomic features, PSA and PSA density) predicted the clinical outcome in all three presented cases.
Figure 2Overall workflow of the radiomics pipeline used in this study. The main phases are: (i) calibration, (ii) pre-processing, and (iii) predictive modelling with leave-one-out cross validation (LOOCV), for which a colour legend is shown in the bottom right corner.
Intergroup comparison of standard-of-care baseline clinicopathological predictors of prostate cancer progression in patients enrolled on active surveillance.
| Baseline predictor | Progressors (n = 34) | Non-progressors (n = 37) | p-value |
|---|---|---|---|
| Median (IQR) | |||
| PSA, ng/mL | 7.0 (4.9–8.7) | 4.9 (3.4–6.8) | 0.021 |
| Gland-volume, mL | 45.0 (32.0–53.0) | 44.8 (35.8–66.5) | 0.329 |
| PSA density | 0.17 (0.10–0.22) | 0.09 (0.06–0.15) | 0.003 |
| Likert score | 4.0 (4.0–5.0) | 4.0 (4.0–5.0) | 0.532 |
| Biopsy grade group 1 (3 + 3 = 6) | 26 | 28 | – |
| Biopsy grade group 2 (3 + 4 = 7) | 8 | 10 | |
| Target lesion in the peripheral zone | 23 | 29 | – |
| Target lesion in the transition zone | 12 | 9 | |
Number of features with high robustness (ICC > 0.8) by varying the number of bins in the quantisation step for radiomic feature extraction for T2w and ADC MR images separately.
| Number of bins | Number of features with excellent robustness | ||
|---|---|---|---|
| T2WI | ADC | Combined | |
| 8 | 38 | 47 | 85 |
| 16 | 36 | 49 | 85 |
| 32 | 33 | 53 | 86 |
| 64 | 35 | 55 | 90 |
| 128 | 34 | 59 | 93 |
| 256 | 33 | 56 | 89 |
Figure 3Heatmaps summarizing areas under the ROC curve (AUC) of predictive models developed including (a) clinicopathological predictors alone, (b) T2WI-derived radiomic features alone, (c) ADC-derived radiomic features alone, (d) a combination of clinicopathological predictors, T2WI-, and ADC-derived radiomic features, (e) a combination of clinicopathological predictors and T2WI-derived radiomic features, (f) a combination clinicopathological predictors and ADC-derived radiomic features, and (g) a combination of T2WI- and ADC-derived radiomic features. Each cell presents an AUC for a model developed using a given combination of feature selection and machine learning algorithms. 95% confidence intervals for each model are summarised in Supplementary Tables S1-7, respectively. Blank cells (b,g) denote models shrunk to the intercept only due to the regularisation approach used by GLMnet.
Summary clinicopathological and T2WI-derived radiomic features comprising the best-performing predictive model of prostate cancer progression on active surveillance developed using the Wilcoxon signed rank test and k-nearest neighbours algorithms for feature selection and classification, respectively.
| Feature class | Feature name |
|---|---|
| Clinicopathological predictor | PSA |
| PSA density | |
| Shape-based (3D) | Maximum 2D diameter (Row) |
| Minor axis length | |
| Surface area | |
| Mesh volume | |
| Voxel volume | |
| Grey level co-occurrence matrix (GLCM) | Informational measure of correlation 1 |
| Informational measure of correlation 2 | |
| MCC: maximal correlation coefficient | |
| Grey level run length matrix (GLRLM) | Grey level NonUniformity |
| Run length NonUniformity | |
| Grey level size zone matrix (GLSZM) | Grey level NonUniformity |
| Grey level dependence matrix (GLDM) | Grey level NonUniformity |
| Neighbouring grey-tone difference matrix (NGTDM) | Busyness |
Summary performance characteristics of the best-performing model (T2WI-derived radiomic features, PSA, and PSA density) from the leave-one-out cross validation results presented in Table 3.
| Parameter | Specificity | Sensitivity | Sensitivity | Specificity |
|---|---|---|---|---|
| Combination | 0.70 | 0.70 | 0.70 | 0.70 |
| 0.75 | 0.67 | 0.75 | 0.63 | |
| 0.80 | 0.63 | 0.80 | 0.52 | |
| 0.85 | 0.54 | 0.85 | 0.34 | |
| 0.90 | 0.37 | 0.90 | 0.28 |
Depending on the clinical need, the predictive performance can be adjusted by prioritising specificity over sensitivity and vice versa, with the resulting parameter combinations presented in the table.