Literature DB >> 29713537

A systematic review on sperm DNA fragmentation in male factor infertility: Laboratory assessment.

Manesh Kumar Panner Selvam1, Ashok Agarwal1.   

Abstract

OBJECTIVE: To review sperm DNA fragmentation (SDF) testing as an important sperm function test in addition to conventional semen analysis. High SDF is negatively associated with semen quality, the fertilisation process, embryo quality, and pregnancy outcome. Over recent decades, different SDF assays have been developed and reviewed extensively to assess their applicability and accuracy as advanced sperm function tests. Amongst them, the standardisation of the terminal deoxynucleotidyl transferased UTP nick-end labelling (TUNEL) assay with a bench top flow cytometer in clinical practice deserves special mention with a threshold value of 16.8% to differentiate infertile men with DNA damage from fertile men.
MATERIALS AND METHODS: A systematic literature search was performed through the PubMed, Medline, and ScienceDirect databases using the keywords 'sperm DNA fragmentation' and 'laboratory assessment'. Non-English articles were excluded and studies related to humans were only included.
RESULTS: Of the 618 identified, 87 studies (original research and reviews) and in addition eight book chapters meeting the selection criteria were included in this review. In all, 366 articles were rejected in the preliminary screening and a further 165 articles related to non-human subjects were excluded.
CONCLUSION: There are pros and cons to all the available SDF assays. TUNEL is a reliable technique with greater accuracy and as an additional diagnostic test in Andrology laboratories along with basic semen analysis can predict fertility outcome, and thus direct the choice of an assisted reproductive technology procedure for infertile couples. Also, the TUNEL assay can be used as a prognostic test and results are beneficial in deciding personalised treatment for infertile men.

Entities:  

Keywords:  AO, acridine orange; ART, assisted reproductive technology; CMA3, chromomysin A3; DFI, DNA fragmentation index; DNA damage; FITC, Fluorescein isothiocyanate; ICSI, intracytoplasmic sperm injection; IUI, intrauterine insemination; IVF, in vitro fertilisation; PI, propidium iodide; ROS, reactive oxygen species; SCD, sperm chromatin dispersion; SCSA, sperm chromatin structure assay; SDF, sperm DNA fragmentation; Sperm DNA fragmentation (SDF); Sperm DNA fragmentation (SDF) assay; TUNEL, terminal deoxynucleotidyl transferased UTP nick-end labelling; TdT, terminal deoxynucleotidyl transferase; Terminal deoxynucleotidyl transferased UTP nick-end labelling (TUNEL); dUTP, 2′-deoxyuridine 5′-triphosphate; dsDNA, double-stranded DNA; ssDNA, single-strand DNA

Year:  2018        PMID: 29713537      PMCID: PMC5922187          DOI: 10.1016/j.aju.2017.12.001

Source DB:  PubMed          Journal:  Arab J Urol        ISSN: 2090-598X


Introduction

Infertility is prevalent in 9% of couples of reproductive age and is described as the inability to establish pregnancy within 12 consecutive months of unprotected intercourse. Amongst infertile couples, ∼20% is contributed by male factors alone [1]. Continuous decline in male fertility over time, which cannot be attributed to any specific cause, results in idiopathic infertility [2]. Various factors underlying male infertility include varicocele, oxidative stress, genetic abnormalities, systemic disease and infections, altered lifestyle, and exposure to xenobiotics [3], [4]. All these factors can influence sperm DNA fragmentation (SDF), which acts as potential mediator for establishing an infertility status in men. Apart from these factors, the reproductive time line in men is one of the factors affecting semen parameters. Decline in the semen quality and increase in the SDF is observed after the ages of 35 and 40 years, respectively [5], [6], [7]. In current practice, male fertility status is evaluated indirectly based on the individual’s semen parameters. Conventional semen analysis is the first step in the assessment of infertile men and it reflects the overall functioning of all male reproductive organs [8]. In general, semen volume, pH, sperm concentration, motility, vitality, and morphology are determined according to the WHO 2010 guidelines [9]. Even though basic semen analysis is considered as the key investigation in all Andrology laboratories worldwide, it cannot accurately differentiate fertile from infertile men. Nearly 15% of infertile men have normal sperm parameters according to the WHO 2010 [10]. This clearly indicates the presence of other subcellular and nuclear factors that have a major contribution towards male infertility that may not be identified by conventional semen analysis. The nuclear component of the spermatozoa, especially sperm DNA integrity, is essential for normal fertilisation, implantation, pregnancy, and foetal development [11], [12]. As a consequence of the high incidence of SDF in the men with idiopathic infertility [13], recent research has focussed more on determining the clinical value of assessing SDF in male infertility and using SDF as an advanced sperm function test along with the conventional tests to evaluate the fertility status of the individual. The importance of the SDF assay has also been recognised in the latest AUA and European Association of Urology guidelines on male infertility [14]. The present review evaluates the different laboratory techniques used for assessing SDF and the association between different SDF assays. The potential clinical use of the terminal deoxynucleotidyl transferased UTP nick-end labelling (TUNEL) assay to measure the SDF is discussed and the future use of SDF assays based on the assisted reproductive technology (ART) outcome are also reviewed.

Materials and methods

An extensive literature search of studies published until October 2017 was performed using the PubMed, Medline, and ScienceDirect databases. The search was limited to full articles in English and studies related to humans. The following primary keywords were used to extract the articles: ‘sperm DNA fragmentation’, ‘laboratory assessment’ and ‘male infertility’. Combination of the following keywords were also used to retrieve articles: ‘sperm DNA damage’, ‘TUNEL assay’, ‘oxidative stress’, ‘ART’, ‘laboratory test’, ‘male infertility’ and ‘advanced sperm test’. Search terms such as ‘SCSA test’, ‘SCD assay’ and ‘Comet assay’ were also used. Cross referencing was also referred to and used in the review process.

Results

A comprehensive literature review via electronic search of databases resulted in a total of 618 articles, comprising both review and original research articles. After preliminary screening, 252 articles were selected, which included different SDF studies from human sperm (Fig. 1). Subsequently, a further 165 were rejected from the 252 selected studies, of which 51 were not related to laboratory assessment of SDF. Finally, 87 full-text articles (original research and reviews) and eight book chapters met the inclusion criteria and were found to be eligible for the review.
Fig. 1

Flow diagram illustrating the study selection criteria.

Flow diagram illustrating the study selection criteria.

SDF and damage

Chemical changes and structural changes in the germ cell DNA take place during the process of spermatogenesis. DNA is the most valuable genetic material and is highly condensed and compactly packed in spermatozoa in order to avoid damage. In general DNA is wrapped around the histone proteins and are replaced by highly basic protamines gradually for effective condensation of the sperm DNA [15], [16], making the spermatozoa transcriptionally and translationally inactive [17]. During this process torsional stress is incurred by double-stranded DNA (dsDNA). Therefore, nicks and breaks in the DNA are created and repair takes place for the proper rearrangement of chromatin [18]. Failure to repair the nicks and its accumulative effect due to reduced protamination leads to DNA damage [19]. Another cause of sperm DNA damage is reactive oxygen species (ROS) generated by immature spermatozoa. ROS attack the spermatozoa during epididymal transit causing damage to sperm DNA, either by activating the endonuclease or sperm caspases [20]. Spermatozoa with poor chromatin packing or with high protamination are susceptible to ROS attack. In addition, SDF also occurs because of the poor disulphide cross-links in the mature spermatozoa due to alteration in the chromatin packaging. Epididymal sperms with lower levels of disulphide cross-linking are prone to DNA damage [21], [22]. Both the intrinsic and extrinsic apoptosis pathways are activated in the spermatozoa on continuous exposure to high levels of ROS and reactive nitrogen species. Activation of pro-apoptotic factors by ROS result in leakage of cytochrome C from the mitochondrial membrane, which in turn activates intrinsic caspase cascade resulting in sperm DNA damage [22], [23], [24]. On the other hand, extrinsic apoptosis is initiated by the activation of Fas protein receptors present on the spermatozoa [25]. These receptors are expressed in 10% of normozoospermic and 50% of oligozoospermic men [26]. Leucocytes expressing ligands FasL bind to Fas receptors resulting in activation of pro-apoptotic proteins, which in turn disturb the mitochondrial pathways resulting in DNA damage. SDF is maximal when both the intrinsic and extrinsic apoptotic pathways are activated [24], [27]. Other aetiological factors include: exposure to environmental toxins, caspase and endogenous endonucleases, replication error, ultraviolet rays, and ionised radiations. Both single-strand DNA (ssDNA) and dsDNA fragmentation are detrimental and make DNA unstable; however, dsDNA fragmentation is an irreversible damage and affects fertilisation and embryo development. To counteract the DNA damage process, DNA repair mechanisms such as nucleotide excision repair, mismatch repair, ssDNA and dsDNA break repair, helps in maintaining DNA integrity (Fig. 2). Defects in DNA repair mechanisms leads to abnormal sperm with a high degree of DNA damage [24].
Fig. 2

DNA damage and repair mechanisms.

DNA damage and repair mechanisms.

Different techniques of SDF assays for measuring DNA damage

A variety of assays have been developed to assess SDF. These tests either directly or indirectly measure sperm DNA integrity. All the tests are different from one another, thus their results are not inter-changeable, and the most commonly clinically used SDF tests are: sperm chromatin structure assay (SCSA), TUNEL, sperm chromatin dispersion (SCD), and the Comet assays.

Specimen preparation for SDF assay

A semen sample needs to be fixed immediately. For microscopic examination, neat semen samples are spread as thin smears on a glass slide and air dried. Further, they are fixed and can be used for staining the spermatozoa in assays such as toluidine blue staining and chromomysin A3 (CMA3) staining. In the case of samples analysed by flow cytometry the steps involved are: fixing, washing, permeabilising, staining, and analysis by flow cytometer. The most important factor affecting SDF during sample preparation is the prolonged incubation of semen samples, which increases SDF significantly after 2 h (8.81%, P = 0.004) and 3 h (10.76%, P < 0.001) [28].

Toluidine blue staining

This microscopy assay assesses the integrity of the chromatin DNA of the spermatozoa. It stains the damaged chromatin nuclear structure of the spermatozoa and the degree of damage is visualised by optical microscopy. Firstly, a thin smear is prepared with the semen sample and air dried. The smear is fixed in 96% ethanol-acetone solution of equal ratio for 30 min at 4 °C. Slides are treated with 0.1 M HCl for 5 min at 4 °C and stained with 0.05% toluidine blue stain for 10 min. Heads of the spermatozoa with high chromatin DNA integrity are stained blue and damaged DNA are stained purple. It is a rapid and simple assay [29], [30].

CMA3 staining

CMA3 staining determines the damage to the DNA by measuring its protamination state. CMA3 binds more to the sperm DNA deficient of protamines, which is an indicator of poor DNA packing and damage [31]. A semen sample smear is made on a glass slide, air dried, and fixed in glacial acetic acid–methanol (1:3) solution for 20 min at 4 °C. The stain containing 0.25 mg/mL of CMA3 with 10 mmol/L of MgCl2 is used for staining the spermatozoa. Stained slides are incubated overnight at 4 °C and examined for the presence of DNA damage. Spermatozoa with low protamination stain light yellow, whereas a bright yellow stain indicates high DNA damage due to increased protamination [32]. A value of >30% DNA damage for semen samples determined by CMA3 assay has a significant effect in lowering fertilisation rates in ICSI [33].

Acridine orange (AO) assay

The AO assay works on the simple principle that as the sperm DNA is subjected to acid denaturation it binds to the AO stain. AO bound to intact DNA is visualised as green and damaged DNA as red. The metachromatic shift in the fluorescence is analysed either by microscope or flow cytometer. For microscopic examination the air-dried semen sample smears are fixed in Carnoy’s fixative for 2 h and followed by staining with AO for 5 min. In the case of flow cytometry analysis, 1 × 106 spermatozoa are fixed in 70% ethanol for 30 min and permeabilised using 0.1% Triton X-100 for 30 s. Then, spermatozoa stained with AO excited at 488-nm wavelength and the green fluorescence from the dsDNA and red fluorescence from ssDNA is measured [34], [35]. The threshold value for this assay varies from 20% to 50% to differentiate fertile from infertile men [35], [36], [37].

SCSA

SCSA is a 30-year-old technique and the most widely studied test for sperm DNA damage. It is described as an indirect assay and the DNA is denatured either by heat or acidic solution to expose the DNA breaks. This assay detects the breaks in the ssDNA. Initially the DNA is denatured either by heat or acid treatment followed by staining with AO. AO bound to dsDNA emits green fluorescence, but when bound to ssDNA it emits red fluorescence. Stained cells are further evaluated with flow cytometry. Green-staining sperm have intact DNA, whilst red-staining sperm have denatured DNA [38]. A clinical threshold for the DNA fragmentation index (DFI) of 30% was established based on the amount of red-staining sperm (DNA damage). This assay can be performed in both fresh and frozen samples. It is also considered a simple test, with high repeatability in intra- and inter-laboratory results. Correlation between two certified laboratories (R2 = 0.98) was high [39]. The assay is also more precise and has a coefficient of variation of ∼1–3% [40]. Threshold levels of 20–30% for the DFI have been determined by the SCSA, which is in contrast with the TUNEL assay ranging between a 4% and 36% DFI [39].

SCD test/Halo

Fernández et al. [41], [42] developed the SCD assay to measure SDF. It is an indirect technique in which intact DNA when loaded in agarose and denatured with acidic solution produces halos/chromatin dispersion due to the relaxed DNA, which is visualised by fluorescence microscopy [43]. Such occurrence is not seen in spermatozoa with fragmented DNA. Sperm with non-dispersed chromatin (i.e. small halos) have fragmented DNA. The amount of sperm with non-dispersed chromatin is directly proportional to the ssDNA damage. This test can be performed on both neat and washed semen samples. Initially, the sperm concentration is adjusted to 5–10 × 106/mL. A 20 µL sample of diluted spermatozoa is mixed with 80 µL 1% low melting agarose at 37 °C. On the pre-coated agarose slides, 50 µL of the aforementioned suspension is spread and allowed to solidify for 4 min at 4 °C and then covered with a coverslip. The second step is the denaturation of the DNA, done by immersing the sperm embedded in agarose into acidic solution (0.08 M HCl) for 7 min in a dark chamber at 22 °C, followed by treatment with neutralising and lysing solutions for 15 min at room temperature to arrest the denaturation. Further, it is washed in Tris–borate-ethylenediamine tetra-acetic acid (EDTA) buffer for 2 min and rehydrated in ascending grades of ethanol (70%, 90% and 100%). Finally the spermatozoa are stained with nuclear stain DAPI (4′,6-diamidino-2-phenylindole) and observed under a fluorescence microscope [30], [42], [44].

Comet assay

In the Comet assay, also known as single-cell gel electrophoresis, the spermatozoa embedded in the agarose gel are lysed with detergent and migration of the fragmented DNA is appreciated as a tail, whilst intact DNA remains in the head. This technique was first introduced by Ostling and Johanson [45] in 1984. During electrophoresis, small-stranded DNA moves out of the head further than large DNA strands. The intensity of the fluorescent staining and length of the tail is directly proportional to different degrees of DNA fragmentation within individual spermatozoon. This assay can detect multiple types of DNA fragmentation only in fresh semen samples and requires only 5000 spermatozoa, hence it can be easily performed even with oligozoospermic samples [46]. Spermatozoa are dispersed individually and suspended in low-melting agarose at 37 °C. This mixture is placed on a microscopic slide and covered with a glass coverslip. These slides are placed at 4 °C to undergo solidification process followed by lysis of spermatozoa with buffer containing Triton X-100 detergent and proteinase K. Electrophoresis of the micro-slides in neutral buffer for 20 min at 25 V separates out the fragmented DNA from intact DNA towards the anode pole [47]. Whereas in the case of the alkaline Comet assay, slides are placed in denaturing solution containing 0.03 M NaOH and 1 M NaCl for 2 min 30 s at 4 °C and electrophoresis carried out for 4 min in 0.03 M NaOH buffer at 20 V [48]. After the completion of electrophoresis the slides are stained with SYBR Green I to visualise fragmented DNA under a fluorescence microscope. The results are analysed based on the tail length either manually or using specialised commercially available software [30].

TUNEL assay: established clinical technique to measure SDF

Amongst all the current assays, determination of SDF in infertile men by TUNEL assay has gained clinical importance, as it targets the DNA strand breaks in the sperm DNA. SDF can be determined either by microscope or flow cytometer and can be performed with neat, washed or cryopreserved samples. However, the flow cytometry based assay is the most accurate due to its high sensitivity compared with the microscopic assay [30]. Our centre, the American Center for Reproductive Medicine, Cleveland Clinic, Cleveland has standardised the TUNEL assay using a bench top flow cytometer (Accuri C6 flow cytometer; BD Biosciences, MI, USA) with reference values [49]. The TUNEL assay is based on the identification of DNA breaks by addition of template-independent DNA polymerase called terminal deoxynucleotidyl transferase (TdT) to the 3′hydroxyl (OH) breaks-ends of ssDNA and dsDNA. Fluorescein isothiocyanate (FITC) is conjugated with 2′-deoxyuridine 5′-triphosphates (dUTPs), the fluorescent signal measured by the flow cytometer is directly proportional to the DNA fragmentation in the analysed spermatozoa. The counter stain propidium iodide (PI), a red-fluorescent dye, is specifically used for nucleic acid staining (Fig. 3) [50].
Fig. 3

Staining of sperm DNA and analysis using flow cytometer.

Staining of sperm DNA and analysis using flow cytometer.

Procedure

Standardisation of the TUNEL assay for SDF has been reported recently with a bench top flow cytometer using the Apo-Direct kit (BD Pharmingen, CA, USA). A minimum of 2 × 106 sperms/mL are aliquoted from the liquefied semen sample and fixed in 1 mL paraformaldehyde (3.7%). Further, the spermatozoa are separated by centrifugation at 600g for 4 min and incubated in ice-cold 70% ethanol at −20 °C for 30 min. After incubation centrifuge again at 300g for 7 min to remove the supernatant without disturbing the sperm pellet. Add 1 mL of wash buffer to the pellet and vortex to re-suspend the sperm pellet. Centrifuge the tubes as in the previous steps to remove the wash buffer. Re-suspend the pellet in the 50 µL of staining solution. Along with the spermatozoa, FITC-dUTP staining is also done for the negative (6553LZ) and positive (6552LZ) control cells provided with the kit. The unreacted and leftover FITC-dUTP after 60 min incubation at 37 °C is removed from the solution by centrifugation (300g for 7 min), followed by rinsing with 1 mL rinse buffer. Finally, the cell pellet is re-suspended in 0.5 mL PI/RNase staining buffer and incubated at room temperature for 30 min. SDF analysis is done on a BD Accuri C6 flow cytometer. The flow cytometer analyses cells based on their physical and fluorescence properties. Spermatozoa are passed through the flow channel and sorted based on the fluorescence signals generated by the stained cells. Each sample is run in duplicate along with the negative and positive controls. Laser detector FL1 (488 nm) with a standard 533/30 nm band pass detects green fluorescence FITC signals, whereas FL2 with a standard 675/25 nm band pass detects red fluorescence produced by PI. A minimum of 10 000 events are analysed and the spermatozoa positive for TUNEL are considered as DNA fragmented. Pre-installed user-friendly Zoom tool software is used to identify the percentage of SDF in the individual semen sample [49].

Standardisation of reference value for TUNEL assay

Several studies have been carried out to establish a reference value for the TUNEL assay. A study by Sergerie et al. [51], analysed samples from 66 infertile men and a reference value of 20%, with a specificity of 89.4% and sensitivity of 96.9% for the test was established, along with a high positive predictive value of 92.8%. Similarly, other studies have also reported threshold values of 12% [49], 20% [52] and 24.3% [53] to differentiate infertile men with SDF from fertile men. Inconsistency and high variability in the reference values for different types of TUNEL assays to assess SDF initiated research at the American Center for Reproductive Medicine to carry out intense studies to arrive at a threshold value to differentiate infertile men with DNA damage from controls. Initially, the test was carried out with 194 infertile men and the assay had much less inter- and intra-observer variability and inter-assay variability (<10%). A threshold value of 19.25% was established with a 64.9% sensitivity and 100% specificity for the assay to differentiate healthy donors from infertile men [54]. As this study lacked clear established reference values and use of the instrument is difficult in clinical practice, a recent study with a large sample size of 261 infertile men defined a reference value of 16.8% with a high specificity of 91.6% and positive predictive value of 91.4% [55] using a bench top Accuri C6 flow cytometer, making it more convenient for clinical laboratory use. A standardised protocol for the assessment of SDF using a bench top flow cytometer was made available for patients in the clinical laboratory [49]. Further, our group has also attempted to standardise the TUNEL assay with another reference laboratory at Basel, Switzerland. The TUNEL assay had high correlation between the two centres (r = 0.94) and similarly the average SDF rates also had a strong positive correlation (r = 0.719) [56]. Currently, experiments to standardise the TUNEL assay between two bench top units, the Accuri C6 flow cytometer and Accuri C6 Plus flow cytometer, has demonstrated the same threshold values for SDF (unpublished data). Overall, these standardisation studies allow researchers to compare results from different laboratories and also to establish reference ranges and improve the predictive value of the TUNEL assay.

Correlation amongst different SDF assays

Even though the comparison between direct (TUNEL) and indirect (SCSA) assays cannot be done, as TUNEL measures real DNA damage whereas SCSA detects the DNA damage after denaturation of DNA treated with acid solution [57], certainly a correlation exists between the techniques when differentiating patients with high SDF from a control group based on the threshold values for each test separately. A meta-analysis by Cui et al. [58] in 2015, reported that SDF assays had high diagnostic accuracy for identification of infertility with a sensitivity and specificity of 80% and 83% respectively having an area under the curve value of 0.92. The SCD and Comet assays had a combined sensitivity of 0.77 and 0.91, with a specificity of 0.91 and 0.84, but the TUNEL test had a pooled sensitivity and specificity of 0.77 and 0.91, respectively. Compared with the SCD and Comet assays, the TUNEL technique has greater accuracy in the detection and differentiation of men with SDF from a control group. Only a few such studies exist that analyse the correlation between the different types of SDF assays. Chohan et al. [59] reported that the SCSA assay had a strong relationship with the TUNEL and SCD assays (r > 0.866; P < 0.001) in fertile and infertile patients for SDF. But no relationship with the AO test. Later, García‐Peiró et al. [60], reported high correlations amongst TUNEL, SCSA and SCD assays in determining SDF in patients (n = 11) and control donors (n = 8). A comprehensive analysis by Ribas-Maynou et al. [61], using different SDF assays identified a high correlation between SCD and SCSA, between SCD and TUNEL, and between SCSA and TUNEL, whilst, there was a moderate correlation between the alkaline Comet assay and SCD, between the alkaline Comet assay and SCSA, and between the alkaline Comet assay and TUNEL. However, there was no correlation between neutral Comet assay and the other assays. A study by Simon et al. [62], identified a positive correlation between the Comet and TUNEL assays (r2 = 0.126; P < 0.001) in couples undergoing ART. The TUNEL and SCSA assays exhibited similar results for SDF in infertile patients compared with a control population [63]and there was a strong correlation for the TUNEL and SCSA assays [64].

Inter-observer and laboratory variation for different SDF assays

Inter-observer and inter-laboratory variation in the available techniques has deterred the commercialisation of SDF assays. Each test has its own limitations and drawbacks. Even though the SCSA test has the least intra- and inter-laboratory variation, the test is yet to be commercialised [65]. For other assays such as AO, CMA3 staining, toluidine blue staining, and SCD assay, inter-observer variability is the major impediment. In the case of the TUNEL assay, the variation has been minimised by standardisation of the assay protocol and the inter-laboratory variability was low for the TUNEL assay compared with the SCSA technique [64]. Taking this to next level, 10 laboratories from the Florence consortium were involved in standardising the protocol for Comet, SCSA and TUNEL assays by analysing the same set of samples amongst all the laboratories. This was mainly aimed to determine the extent of correlation amongst the three tests and the degree of variation amongst the laboratories [66].

Current status and future directions in SDF assay

In the modern era, about 2–4% of births in developed countries are the result of ART [67] and sperm DNA testing has been highly recommended in clinical practice to select spermatozoa with high DNA integrity to achieve better fertilisation rates, as poor DNA integrity use in ART procedures is associated with decreased implantation and pregnancy rates [68]. Although each SDF technique has its own limitations, prognostic values have been assigned for different assays [69]. The TUNEL assay is considered to be the most simple, sensitive and reliable test for assessing SDF with low inter-observer variation [70]. As we witness an increasing trend in fertility research, in the future the performance and accuracy of the SDF tests in defining the cause for male infertility may increase tremendously. Male infertility factors such as advanced age, varicocele, idiopathic infertility, obesity, and testicular cancer have major influences on SDF rates (Table 1). In most ART procedures, sperm DNA damage determines the effect on the fertilisation rate and embryo quality. It also has a negative effect on the pregnancy rate by intrauterine insemination (IUI), IVF and ICSI resulting in low live-birth rate and increased miscarriages and spontaneous pregnancy loss (Table 1). Therefore, the use of SDF tests can assure an increase in the success rate in infertile couples undergoing ART procedures.
Table 1

Associated factors and effect of high SDF on ART outcomes.

Factors contributing to increased SDFImpact of high SDF on ART outcomes
Idiopathic or unexplained infertility

High degree SDF despite having normal semen parameters [13]

Advanced male age

Positive correlation with age [71]

%DFI higher in men aged ≥40 years [72]

Varicocele

Positive association exists between varicocele and SDF [73]

High SDF in both fertile and infertile men with varicocele

Chemo/radiotherapy

Impaired spermatogenesis and fertility [74]

Radiotherapy increased SDF and chemotherapy lowered SDF [75]

Radioiodine therapy for thyroid cancer increased DFI [76]

Testicular trauma/severe infection

Oxidative stress positive correlated with SDF [77]

High SDF even in low levels of leucocytospermia [78]

Male obesity

Poor spermatogenesis [79] and associated with high SDF [80]

Occupational exposure

High SDF in workers exposed to pesticides and ionising radiations

Bisphenol-A exposure leads to high SDF [81]

Patient life style

Smoking has negative impact on sperm DNA integrity [82]

Excessive alcohol consumption increases SDF [83]

Natural pregnancy

Very low conception rates [84]

IUI

Low pregnancy rate (odds ratio 9.9) [85]

Pregnancy loss with SDF >12% [86] and DFI >27% [87]

IVF/ICSI

Negatively correlated with SDF

Fair to poor predictive value of different SDF assays for prediction of pregnancy [88]

Fertilisation rate and embryo quality

SDF ≥22.3% had significantly lower fertilisation rates with ICSI [89]

Negative impact on reduced cleavage [90]and blastulation rate [91] decreased blastocyst development [92]

Live-birth rate

Negative association with live-birth rate after IVF [93]

Increased live-birth rate with low SDF [94]

High miscarriage rates and recurrent spontaneous abortion after IVF and ICSI [95]

Associated factors and effect of high SDF on ART outcomes. High degree SDF despite having normal semen parameters [13] Positive correlation with age [71] %DFI higher in men aged ≥40 years [72] Positive association exists between varicocele and SDF [73] High SDF in both fertile and infertile men with varicocele Impaired spermatogenesis and fertility [74] Radiotherapy increased SDF and chemotherapy lowered SDF [75] Radioiodine therapy for thyroid cancer increased DFI [76] Oxidative stress positive correlated with SDF [77] High SDF even in low levels of leucocytospermia [78] Poor spermatogenesis [79] and associated with high SDF [80] High SDF in workers exposed to pesticides and ionising radiations Bisphenol-A exposure leads to high SDF [81] Smoking has negative impact on sperm DNA integrity [82] Excessive alcohol consumption increases SDF [83] Very low conception rates [84] Low pregnancy rate (odds ratio 9.9) [85] Pregnancy loss with SDF >12% [86] and DFI >27% [87] Negatively correlated with SDF Fair to poor predictive value of different SDF assays for prediction of pregnancy [88] SDF ≥22.3% had significantly lower fertilisation rates with ICSI [89] Negative impact on reduced cleavage [90]and blastulation rate [91] decreased blastocyst development [92] Negative association with live-birth rate after IVF [93] Increased live-birth rate with low SDF [94] High miscarriage rates and recurrent spontaneous abortion after IVF and ICSI [95]

Conclusion

Even though different tests are available to assess SDF, still they lack optimisation and clear-cut clinical reference values, which makes the routine use of the SDF assays controversial. Amongst the SDF assays, SCSA is considered as a simple indirect test but certain limitations still restrict its use and commercialisation. The TUNEL technique, being a direct assay, assesses SDF with greater accuracy and the standardisation and optimisation of the most commonly used TUNEL assay, with no intra-laboratory variation, will increase the positive predictive value and precise use of SDF testing in clinical scenarios to determine molecular factors underlying male infertility. As this is just the beginning of the use of SDF assays in clinical practice, in future more comprehensive studies may increase the scope of providing SDF testing to infertile couples for better management.

Conflict of interest

None.
  81 in total

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Authors:  Murali K Ankem; Eric Mayer; W Steven Ward; Kenneth B Cummings; Joseph G Barone
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Review 2.  Sperm DNA damage and its clinical relevance in assessing reproductive outcome.

Authors:  R K Sharma; T Said; A Agarwal
Journal:  Asian J Androl       Date:  2004-06       Impact factor: 3.285

3.  Efficient treatment of infertility due to sperm DNA damage by ICSI with testicular spermatozoa.

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Journal:  Hum Reprod       Date:  2004-11-11       Impact factor: 6.918

4.  Abundant alkali-sensitive sites in DNA of human and mouse sperm.

Authors:  N P Singh; D B Danner; R R Tice; M T McCoy; G D Collins; E L Schneider
Journal:  Exp Cell Res       Date:  1989-10       Impact factor: 3.905

5.  Semen quality and sperm DNA damage in relation to urinary bisphenol A among men from an infertility clinic.

Authors:  John D Meeker; Shelley Ehrlich; Thomas L Toth; Diane L Wright; Antonia M Calafat; Ana T Trisini; Xiaoyun Ye; Russ Hauser
Journal:  Reprod Toxicol       Date:  2010-07-23       Impact factor: 3.143

6.  Use of acridine orange to evaluate chromatin integrity of human spermatozoa in different groups of infertile men.

Authors:  K Gopalkrishnan; K Hurkadli; V Padwal; D Balaiah
Journal:  Andrologia       Date:  1999-09       Impact factor: 2.775

7.  A comparison of DNA damage in testicular and proximal epididymal spermatozoa in obstructive azoospermia.

Authors:  E K Steele; N McClure; R J Maxwell; S E Lewis
Journal:  Mol Hum Reprod       Date:  1999-09       Impact factor: 4.025

Review 8.  Sperm selection in assisted reproductive techniques.

Authors:  Uwe Paasch; Sonja Grunewald; Hans-Juergen Glander
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9.  Microelectrophoretic study of radiation-induced DNA damages in individual mammalian cells.

Authors:  O Ostling; K J Johanson
Journal:  Biochem Biophys Res Commun       Date:  1984-08-30       Impact factor: 3.575

10.  Comprehensive analysis of sperm DNA fragmentation by five different assays: TUNEL assay, SCSA, SCD test and alkaline and neutral Comet assay.

Authors:  J Ribas-Maynou; A García-Peiró; A Fernández-Encinas; C Abad; M J Amengual; E Prada; J Navarro; J Benet
Journal:  Andrology       Date:  2013-07-11       Impact factor: 3.842

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  23 in total

Review 1.  Paternal factors contributing to embryo quality.

Authors:  Stacy Colaco; Denny Sakkas
Journal:  J Assist Reprod Genet       Date:  2018-09-11       Impact factor: 3.412

2.  Vitamin D3 Supplementation Effects on Spermatogram and Oxidative Stress Biomarkers in Asthenozoospermia Infertile Men: a Randomized, Triple-Blind, Placebo-Controlled Clinical Trial.

Authors:  Leila Maghsoumi-Norouzabad; Ahmad Zare Javid; Anahita Mansoori; Mohammadreza Dadfar; Amirarsalan Serajian
Journal:  Reprod Sci       Date:  2021-10-18       Impact factor: 3.060

3.  Predictive Significance of Sperm DNA Fragmentation Testing in Early Pregnancy Loss in Infertile Couples Undergoing Intracytoplasmic Sperm Injection.

Authors:  Minh Tam Le; Trung Van Nguyen; Thai Thanh Thi Nguyen; Hiep Tuyet Thi Nguyen; Duong Dinh Le; Vu Quoc Huy Nguyen
Journal:  Res Rep Urol       Date:  2021-06-01

4.  Sperm DNA fragmentation and male fertility: a retrospective study of 5114 men attending a reproductive center.

Authors:  Fengbin Zhang; Jingping Li; Zhongyan Liang; Jinggen Wu; Lejun Li; Chong Chen; Fan Jin; Yonghong Tian
Journal:  J Assist Reprod Genet       Date:  2021-03-03       Impact factor: 3.412

5.  Sperm selection during ICSI treatments reduces single- but not double-strand DNA break values compared to the semen sample.

Authors:  Sandra Lara-Cerrillo; Jordi Ribas-Maynou; Candela Rosado-Iglesias; Tania Lacruz-Ruiz; Jordi Benet; Agustín García-Peiró
Journal:  J Assist Reprod Genet       Date:  2021-03-04       Impact factor: 3.412

6.  Effect of Letrozole on sperm parameters, chromatin status and ROS level in idiopathic Oligo/Astheno/Teratozoospermia.

Authors:  Leila Kooshesh; Soghra Bahmanpour; Shahriar Zeighami; Mohammad Hussain Nasr-Esfahani
Journal:  Reprod Biol Endocrinol       Date:  2020-05-13       Impact factor: 5.211

7.  A treatment algorithm for couples with unexplained infertility based on sperm chromatin assessment.

Authors:  C L O'Neill; A Parrella; D Keating; S Cheung; Z Rosenwaks; G D Palermo
Journal:  J Assist Reprod Genet       Date:  2018-07-28       Impact factor: 3.412

8.  Effect of Sperm DNA Fragmentation on Embryo Quality in Normal Responder Women in In Vitro Fertilization and Intracytoplasmic Sperm Injection.

Authors:  Su Mi Kim; Seul Ki Kim; Byung Chul Jee; Seok Hyun Kim
Journal:  Yonsei Med J       Date:  2019-05       Impact factor: 2.759

9.  Does conventional freezing affect sperm DNA fragmentation?

Authors:  Minh Tam Le; Thai Thanh Thi Nguyen; Tung Thanh Nguyen; Trung Van Nguyen; Tam An Thi Nguyen; Quoc Huy Vu Nguyen; Thanh Ngoc Cao
Journal:  Clin Exp Reprod Med       Date:  2019-06-01

Review 10.  Male Infertility is a Women's Health Issue-Research and Clinical Evaluation of Male Infertility Is Needed.

Authors:  Katerina A Turner; Amarnath Rambhatla; Samantha Schon; Ashok Agarwal; Stephen A Krawetz; James M Dupree; Tomer Avidor-Reiss
Journal:  Cells       Date:  2020-04-16       Impact factor: 6.600

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