Literature DB >> 29498890

Structure and Dynamics of Membrane Proteins from Solid-State NMR.

Venkata S Mandala1, Jonathan K Williams1, Mei Hong1.   

Abstract

Solid-state nuclear magnetic resonance (SSNMR) spectroscopy elucidates membrane protein structures and dynamics in atomic detail to yield mechanistic insights. By interrogating membrane proteins in phospholipid bilayers that closely resemble biological membranes, SSNMR spectroscopists have revealed ion conduction mechanisms, substrate transport dynamics, and oligomeric interfaces of seven-transmembrane helix proteins. Research has also identified conformational plasticity underlying virus-cell membrane fusions by complex protein machineries, and β-sheet folding and assembly by amyloidogenic proteins bound to lipid membranes. These studies collectively show that membrane proteins exhibit extensive structural plasticity to carry out their functions. Because of the inherent dependence of NMR frequencies on molecular orientations and the sensitivity of NMR frequencies to dynamical processes on timescales from nanoseconds to seconds, SSNMR spectroscopy is ideally suited to elucidate such structural plasticity, local and global conformational dynamics, protein-lipid and protein-ligand interactions, and protonation states of polar residues. New sensitivity-enhancement techniques, resolution enhancement by ultrahigh magnetic fields, and the advent of 3D and 4D correlation NMR techniques are increasingly aiding these mechanistically important structural studies.

Entities:  

Keywords:  conformational dynamics; ion channels; magic-angle-spinning NMR; transporters; viral fusion proteins

Mesh:

Substances:

Year:  2018        PMID: 29498890      PMCID: PMC6312106          DOI: 10.1146/annurev-biophys-070816-033712

Source DB:  PubMed          Journal:  Annu Rev Biophys        ISSN: 1936-122X            Impact factor:   12.981


  110 in total

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Journal:  Mol Microbiol       Date:  2000-07       Impact factor: 3.501

2.  Solid-state NMR spectroscopy applied to a chimeric potassium channel in lipid bilayers.

Authors:  Robert Schneider; Christian Ader; Adam Lange; Karin Giller; Sönke Hornig; Olaf Pongs; Stefan Becker; Marc Baldus
Journal:  J Am Chem Soc       Date:  2008-05-14       Impact factor: 15.419

3.  Fibrillation of β amyloid peptides in the presence of phospholipid bilayers and the consequent membrane disruption.

Authors:  Wei Qiang; Wai-Ming Yau; Jürgen Schulte
Journal:  Biochim Biophys Acta       Date:  2014-04-22

4.  Structural Basis for Asymmetric Conductance of the Influenza M2 Proton Channel Investigated by Solid-State NMR Spectroscopy.

Authors:  Venkata S Mandala; Shu-Yu Liao; Byungsu Kwon; Mei Hong
Journal:  J Mol Biol       Date:  2017-05-20       Impact factor: 5.469

5.  Solid-State Nuclear Magnetic Resonance Investigation of the Structural Topology and Lipid Interactions of a Viral Fusion Protein Chimera Containing the Fusion Peptide and Transmembrane Domain.

Authors:  Hongwei Yao; Myungwoon Lee; Shu-Yu Liao; Mei Hong
Journal:  Biochemistry       Date:  2016-11-29       Impact factor: 3.162

6.  Viral fusion protein transmembrane domain adopts β-strand structure to facilitate membrane topological changes for virus-cell fusion.

Authors:  Hongwei Yao; Michelle W Lee; Alan J Waring; Gerard C L Wong; Mei Hong
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-17       Impact factor: 11.205

7.  Structure and mechanism of the M2 proton channel of influenza A virus.

Authors:  Jason R Schnell; James J Chou
Journal:  Nature       Date:  2008-01-31       Impact factor: 49.962

8.  pH-dependent conformation, dynamics, and aromatic interaction of the gating tryptophan residue of the influenza M2 proton channel from solid-state NMR.

Authors:  Jonathan K Williams; Yuan Zhang; Klaus Schmidt-Rohr; Mei Hong
Journal:  Biophys J       Date:  2013-04-16       Impact factor: 4.033

9.  Immobilization of the influenza A M2 transmembrane peptide in virus envelope-mimetic lipid membranes: a solid-state NMR investigation.

Authors:  Wenbin Luo; Sarah D Cady; Mei Hong
Journal:  Biochemistry       Date:  2009-07-14       Impact factor: 3.162

10.  Aromatic spectral editing techniques for magic-angle-spinning solid-state NMR spectroscopy of uniformly (13)C-labeled proteins.

Authors:  Jonathan K Williams; Klaus Schmidt-Rohr; Mei Hong
Journal:  Solid State Nucl Magn Reson       Date:  2015-09-14       Impact factor: 2.293

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  30 in total

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Review 2.  GPCR drug discovery: integrating solution NMR data with crystal and cryo-EM structures.

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Review 3.  NMR techniques in studying water in biotechnological systems.

Authors:  Victor V Rodin
Journal:  Biophys Rev       Date:  2020-06-15

Review 4.  Elucidating ligand-bound structures of membrane proteins using solid-state NMR spectroscopy.

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6.  Refocusing CSA during magic angle spinning rotating-frame relaxation experiments.

Authors:  Eric G Keeler; Keith J Fritzsching; Ann E McDermott
Journal:  J Magn Reson       Date:  2018-09-14       Impact factor: 2.229

7.  Determining Cholesterol Binding to Membrane Proteins by Cholesterol 13C Labeling in Yeast and Dynamic Nuclear Polarization NMR.

Authors:  Matthew R Elkins; Ivan V Sergeyev; Mei Hong
Journal:  J Am Chem Soc       Date:  2018-10-30       Impact factor: 15.419

Review 8.  Tailoring NMR experiments for structural characterization of amorphous biological solids: A practical guide.

Authors:  John E Kelly; Christine Chrissian; Ruth E Stark
Journal:  Solid State Nucl Magn Reson       Date:  2020-08-27       Impact factor: 2.293

Review 9.  Biomolecular complex viewed by dynamic nuclear polarization solid-state NMR spectroscopy.

Authors:  Arnab Chakraborty; Fabien Deligey; Jenny Quach; Frederic Mentink-Vigier; Ping Wang; Tuo Wang
Journal:  Biochem Soc Trans       Date:  2020-06-30       Impact factor: 5.407

10.  Efficient 15N-13C Polarization Transfer by Third-Spin-Assisted Pulsed Cross-Polarization Magic-Angle-Spinning NMR for Protein Structure Determination.

Authors:  Martin D Gelenter; Mei Hong
Journal:  J Phys Chem B       Date:  2018-08-28       Impact factor: 2.991

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