Literature DB >> 30903830

Elucidating ligand-bound structures of membrane proteins using solid-state NMR spectroscopy.

Matthew R Elkins1, Mei Hong2.   

Abstract

Magic-angle-spinning (MAS) solid-state NMR spectroscopy is a versatile technique to elucidate functionally important protein-ligand interactions in lipid membranes. Here, we review recent solid-state NMR studies of membrane protein interactions with cholesterol, lipids, transported substrates, and peptide ligands. These studies are conducted in synthetic or native lipid bilayers to provide an accurate environment for ligand binding. The solid-state NMR approaches include multinuclear detection to gain comprehensive structural information, distance measurements to locate ligand-binding sites, and dynamic nuclear polarization and 1H detection to enhance spectral sensitivity. These studies provide novel insights into the mechanisms of virus budding, virus entry into cells, transmembrane signaling, substrate transport, antibacterial action, and many other biological processes.
Copyright © 2019 Elsevier Ltd. All rights reserved.

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Year:  2019        PMID: 30903830      PMCID: PMC6697555          DOI: 10.1016/j.sbi.2019.02.002

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  45 in total

1.  Fluorocholesterols, in contrast to hydroxycholesterols, exhibit interfacial properties similar to cholesterol.

Authors:  J M Kauffman; P W Westerman; M C Carey
Journal:  J Lipid Res       Date:  2000-06       Impact factor: 5.922

Review 2.  Production of isotope-labeled proteins in insect cells for NMR.

Authors:  Bastian Franke; Christian Opitz; Shin Isogai; Anne Grahl; Leonildo Delgado; Alvar D Gossert; Stephan Grzesiek
Journal:  J Biomol NMR       Date:  2018-04-23       Impact factor: 2.835

3.  Use of the cell wall precursor lipid II by a pore-forming peptide antibiotic.

Authors:  E Breukink; I Wiedemann; C van Kraaij; O P Kuipers; H G Sahl; B de Kruijff
Journal:  Science       Date:  1999-12-17       Impact factor: 47.728

4.  Crystal structure of HIV-1 gp41 including both fusion peptide and membrane proximal external regions.

Authors:  Victor Buzon; Ganesh Natrajan; David Schibli; Felix Campelo; Michael M Kozlov; Winfried Weissenhorn
Journal:  PLoS Pathog       Date:  2010-05-06       Impact factor: 6.823

5.  Influenza virus A M2 protein generates negative Gaussian membrane curvature necessary for budding and scission.

Authors:  Nathan W Schmidt; Abhijit Mishra; Jun Wang; William F DeGrado; Gerard C L Wong
Journal:  J Am Chem Soc       Date:  2013-09-06       Impact factor: 15.419

6.  Cholesterol-binding site of the influenza M2 protein in lipid bilayers from solid-state NMR.

Authors:  Matthew R Elkins; Jonathan K Williams; Martin D Gelenter; Peng Dai; Byungsu Kwon; Ivan V Sergeyev; Bradley L Pentelute; Mei Hong
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-20       Impact factor: 11.205

7.  Fast Magic-Angle-Spinning 19F Spin Exchange NMR for Determining Nanometer 19F-19F Distances in Proteins and Pharmaceutical Compounds.

Authors:  Matthias Roos; Tuo Wang; Alexander A Shcherbakov; Mei Hong
Journal:  J Phys Chem B       Date:  2018-03-13       Impact factor: 2.991

8.  Coupled ATPase-adenylate kinase activity in ABC transporters.

Authors:  Hundeep Kaur; Andrea Lakatos-Karoly; Ramona Vogel; Anne Nöll; Robert Tampé; Clemens Glaubitz
Journal:  Nat Commun       Date:  2016-12-22       Impact factor: 14.919

9.  Structural basis of ligand binding modes at the neuropeptide Y Y1 receptor.

Authors:  Zhenlin Yang; Shuo Han; Max Keller; Anette Kaiser; Brian J Bender; Mathias Bosse; Kerstin Burkert; Lisa M Kögler; David Wifling; Guenther Bernhardt; Nicole Plank; Timo Littmann; Peter Schmidt; Cuiying Yi; Beibei Li; Sheng Ye; Rongguang Zhang; Bo Xu; Dan Larhammar; Raymond C Stevens; Daniel Huster; Jens Meiler; Qiang Zhao; Annette G Beck-Sickinger; Armin Buschauer; Beili Wu
Journal:  Nature       Date:  2018-04-18       Impact factor: 49.962

10.  High-resolution NMR studies of antibiotics in cellular membranes.

Authors:  João Medeiros-Silva; Shehrazade Jekhmane; Alessandra Lucini Paioni; Katarzyna Gawarecka; Marc Baldus; Ewa Swiezewska; Eefjan Breukink; Markus Weingarth
Journal:  Nat Commun       Date:  2018-09-27       Impact factor: 14.919

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  2 in total

Review 1.  Biophysical Approaches for the Characterization of Protein-Metabolite Interactions.

Authors:  Anja Thalhammer; Nina K Bröker
Journal:  Methods Mol Biol       Date:  2023

2.  Activation of adenosine A2A receptor by lipids from docosahexaenoic acid revealed by NMR.

Authors:  Takuya Mizumura; Keita Kondo; Masatoshi Kurita; Yutaka Kofuku; Mei Natsume; Shunsuke Imai; Yutaro Shiraishi; Takumi Ueda; Ichio Shimada
Journal:  Sci Adv       Date:  2020-03-18       Impact factor: 14.136

  2 in total

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