Literature DB >> 28396821

Effects of Resolution and Registration Algorithm on the Accuracy of EPI vNavs for Real Time Head Motion Correction in MRI.

Yingzhuo Zhang1, Iman Aganj2, André J W van der Kouwe2, M Dylan Tisdall2.   

Abstract

Low-resolution, EPI-based Volumetric Navigators (vNavs) have been used as a prospective motion-correction system in a variety of MRI neuroimaging pulse sequences. The use of low-resolution volumes represents a trade-off between motion tracking accuracy and acquisition time. However, this means that registration must be accurate on the order of 0.2 voxels or less to be effective for motion correction. While vNavs have shown promising results in clinical and research use, the choice of navigator and registration algorithm have not previously been systematically evaluated. In this work we experimentally evaluate the accuracy of vNavs, and possible design choices for future improvements to the system, using real human data. We acquired navigator volumes at three isotropic resolutions (6.4 mm, 8 mm, and 10 mm) with known rotations and translations. The vNavs were then rigidly registered using trilinear, tricubic, and cubic B-spline interpolation. We demonstrate a novel refactoring of the cubic B-spline algorithm that stores pre-computed coefficients to reduce the per-interpolation time to be identical to tricubic interpolation. Our results show that increasing vNav resolution improves registration accuracy, and that cubic B-splines provide the highest registration accuracy at all vNav resolutions. Our results also suggest that the time required by vNavs may be reduced by imaging at 10 mm resolution, without substantial cost in registration accuracy.

Entities:  

Year:  2016        PMID: 28396821      PMCID: PMC5384651          DOI: 10.1109/CVPRW.2016.79

Source DB:  PubMed          Journal:  Conf Comput Vis Pattern Recognit Workshops        ISSN: 2160-7508


  10 in total

1.  Modeling geometric deformations in EPI time series.

Authors:  J L Andersson; C Hutton; J Ashburner; R Turner; K Friston
Journal:  Neuroimage       Date:  2001-05       Impact factor: 6.556

2.  Interpolation revisited.

Authors:  P Thévenaz; T Blu; M Unser
Journal:  IEEE Trans Med Imaging       Date:  2000-07       Impact factor: 10.048

3.  Prospective acquisition correction for head motion with image-based tracking for real-time fMRI.

Authors:  S Thesen; O Heid; E Mueller; L R Schad
Journal:  Magn Reson Med       Date:  2000-09       Impact factor: 4.668

Review 4.  Prospective motion correction in brain imaging: a review.

Authors:  Julian Maclaren; Michael Herbst; Oliver Speck; Maxim Zaitsev
Journal:  Magn Reson Med       Date:  2012-05-08       Impact factor: 4.668

5.  Registration of head volume images using implantable fiducial markers.

Authors:  C R Maurer; J M Fitzpatrick; M Y Wang; R L Galloway; R J Maciunas; G S Allen
Journal:  IEEE Trans Med Imaging       Date:  1997-08       Impact factor: 10.048

Review 6.  Motion artifacts in MRI: A complex problem with many partial solutions.

Authors:  Maxim Zaitsev; Julian Maclaren; Michael Herbst
Journal:  J Magn Reson Imaging       Date:  2015-01-28       Impact factor: 4.813

7.  Real-time motion and B0 corrected single voxel spectroscopy using volumetric navigators.

Authors:  Aaron T Hess; M Dylan Tisdall; Ovidiu C Andronesi; Ernesta M Meintjes; André J W van der Kouwe
Journal:  Magn Reson Med       Date:  2011-03-04       Impact factor: 4.668

8.  Highly accurate inverse consistent registration: a robust approach.

Authors:  Martin Reuter; H Diana Rosas; Bruce Fischl
Journal:  Neuroimage       Date:  2010-07-14       Impact factor: 6.556

9.  On removing interpolation and resampling artifacts in rigid image registration.

Authors:  Iman Aganj; Boon Thye Thomas Yeo; Mert R Sabuncu; Bruce Fischl
Journal:  IEEE Trans Image Process       Date:  2012-10-11       Impact factor: 10.856

10.  Volumetric navigators for prospective motion correction and selective reacquisition in neuroanatomical MRI.

Authors:  M Dylan Tisdall; Aaron T Hess; Martin Reuter; Ernesta M Meintjes; Bruce Fischl; André J W van der Kouwe
Journal:  Magn Reson Med       Date:  2011-12-28       Impact factor: 4.668

  10 in total
  2 in total

1.  Accurate High-speed 3D-Registration of EPI vNavs for Head Motion Correction.

Authors:  Yingzhuo Zhang; Iman Aganj; André J W van der Kouwe; Matthew Dylan Tisdall
Journal:  Proc Int Soc Magn Reson Med Sci Meet Exhib Int Soc Magn Reson Med Sci Meet Exhib       Date:  2017-04

2.  Assessing the effects of subject motion on T2 relaxation under spin tagging (TRUST) cerebral oxygenation measurements using volume navigators.

Authors:  Jeffrey N Stout; M Dylan Tisdall; Patrick McDaniel; Borjan Gagoski; Divya S Bolar; Patricia Ellen Grant; Elfar Adalsteinsson
Journal:  Magn Reson Med       Date:  2017-02-28       Impact factor: 4.668

  2 in total

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