Literature DB >> 22213578

Volumetric navigators for prospective motion correction and selective reacquisition in neuroanatomical MRI.

M Dylan Tisdall1, Aaron T Hess, Martin Reuter, Ernesta M Meintjes, Bruce Fischl, André J W van der Kouwe.   

Abstract

We introduce a novel method of prospectively compensating for subject motion in neuroanatomical imaging. Short three-dimensional echo-planar imaging volumetric navigators are embedded in a long three-dimensional sequence, and the resulting image volumes are registered to provide an estimate of the subject's location in the scanner at a cost of less than 500 ms, ~ 1% change in contrast, and ~3% change in intensity. This time fits well into the existing gaps in sequences routinely used for neuroimaging, thus giving a motion-corrected sequence with no extra time required. We also demonstrate motion-driven selective reacquisition of k-space to further compensate for subject motion. We perform multiple validation experiments to evaluate accuracy, navigator impact on tissue intensity/contrast, and the improvement in final output. The complete system operates without adding additional hardware to the scanner and requires no external calibration, making it suitable for high-throughput environments.
Copyright © 2011 Wiley Periodicals, Inc.

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Year:  2011        PMID: 22213578      PMCID: PMC3320676          DOI: 10.1002/mrm.23228

Source DB:  PubMed          Journal:  Magn Reson Med        ISSN: 0740-3194            Impact factor:   4.668


  34 in total

1.  High-resolution intersubject averaging and a coordinate system for the cortical surface.

Authors:  B Fischl; M I Sereno; R B Tootell; A M Dale
Journal:  Hum Brain Mapp       Date:  1999       Impact factor: 5.038

2.  Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain.

Authors:  Bruce Fischl; David H Salat; Evelina Busa; Marilyn Albert; Megan Dieterich; Christian Haselgrove; Andre van der Kouwe; Ron Killiany; David Kennedy; Shuna Klaveness; Albert Montillo; Nikos Makris; Bruce Rosen; Anders M Dale
Journal:  Neuron       Date:  2002-01-31       Impact factor: 17.173

3.  Automatically parcellating the human cerebral cortex.

Authors:  Bruce Fischl; André van der Kouwe; Christophe Destrieux; Eric Halgren; Florent Ségonne; David H Salat; Evelina Busa; Larry J Seidman; Jill Goldstein; David Kennedy; Verne Caviness; Nikos Makris; Bruce Rosen; Anders M Dale
Journal:  Cereb Cortex       Date:  2004-01       Impact factor: 5.357

4.  Reliability in multi-site structural MRI studies: effects of gradient non-linearity correction on phantom and human data.

Authors:  Jorge Jovicich; Silvester Czanner; Douglas Greve; Elizabeth Haley; Andre van der Kouwe; Randy Gollub; David Kennedy; Franz Schmitt; Gregory Brown; James Macfall; Bruce Fischl; Anders Dale
Journal:  Neuroimage       Date:  2005-11-21       Impact factor: 6.556

5.  Real-time rigid body motion correction and shimming using cloverleaf navigators.

Authors:  André J W van der Kouwe; Thomas Benner; Anders M Dale
Journal:  Magn Reson Med       Date:  2006-11       Impact factor: 4.668

6.  Sequence-independent segmentation of magnetic resonance images.

Authors:  Bruce Fischl; David H Salat; André J W van der Kouwe; Nikos Makris; Florent Ségonne; Brian T Quinn; Anders M Dale
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

7.  Cortical surface-based analysis. II: Inflation, flattening, and a surface-based coordinate system.

Authors:  B Fischl; M I Sereno; A M Dale
Journal:  Neuroimage       Date:  1999-02       Impact factor: 6.556

8.  Characterizing dynamic brain responses with fMRI: a multivariate approach.

Authors:  K J Friston; C D Frith; R S Frackowiak; R Turner
Journal:  Neuroimage       Date:  1995-06       Impact factor: 6.556

9.  Prospective motion correction of high-resolution magnetic resonance imaging data in children.

Authors:  Timothy T Brown; Joshua M Kuperman; Matthew Erhart; Nathan S White; J Cooper Roddey; Ajit Shankaranarayanan; Eric T Han; Dan Rettmann; Anders M Dale
Journal:  Neuroimage       Date:  2010-06-11       Impact factor: 6.556

10.  Accurate and robust brain image alignment using boundary-based registration.

Authors:  Douglas N Greve; Bruce Fischl
Journal:  Neuroimage       Date:  2009-06-30       Impact factor: 6.556

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  145 in total

1.  Multifactorial pathways facilitate resilience among kindergarteners at risk for dyslexia: A longitudinal behavioral and neuroimaging study.

Authors:  Jennifer Zuk; Jade Dunstan; Elizabeth Norton; Xi Yu; Ola Ozernov-Palchik; Yingying Wang; Tiffany P Hogan; John D E Gabrieli; Nadine Gaab
Journal:  Dev Sci       Date:  2020-05-21

2.  Real-time simultaneous shim and motion measurement and correction in glycoCEST MRI using double volumetric navigators (DvNavs).

Authors:  Gizeaddis L Simegn; Andre J W Van der Kouwe; Frances C Robertson; Ernesta M Meintjes; Ali Alhamud
Journal:  Magn Reson Med       Date:  2018-12-02       Impact factor: 4.668

3.  Increased Thalamocortical Connectivity in Schizophrenia Correlates With Sleep Spindle Deficits: Evidence for a Common Pathophysiology.

Authors:  Bengi Baran; Fikret Işık Karahanoğlu; Dimitrios Mylonas; Charmaine Demanuele; Mark Vangel; Robert Stickgold; Alan Anticevic; Dara S Manoach
Journal:  Biol Psychiatry Cogn Neurosci Neuroimaging       Date:  2019-05-08

4.  Probabilistic tractography-based thalamic parcellation in healthy newborns and newborns with congenital heart disease.

Authors:  Camilo Jaimes; Henry H Cheng; Janet Soul; Silvina Ferradal; Yogesh Rathi; Borjan Gagoski; Jane W Newburger; P Ellen Grant; Lilla Zöllei
Journal:  J Magn Reson Imaging       Date:  2017-10-28       Impact factor: 4.813

5.  Homogeneous coordinates in motion correction.

Authors:  Benjamin Zahneisen; Thomas Ernst
Journal:  Magn Reson Med       Date:  2015-02-03       Impact factor: 4.668

6.  White Matter Tract Integrity, Involvement in Sports, and Depressive Symptoms in Children.

Authors:  Lisa S Gorham; Deanna M Barch
Journal:  Child Psychiatry Hum Dev       Date:  2020-01-25

7.  The relationship between socioeconomic status and white matter microstructure in pre-reading children: A longitudinal investigation.

Authors:  Ola Ozernov-Palchik; Elizabeth S Norton; Yingying Wang; Sara D Beach; Jennifer Zuk; Maryanne Wolf; John D E Gabrieli; Nadine Gaab
Journal:  Hum Brain Mapp       Date:  2018-10-01       Impact factor: 5.038

8.  Head motion during MRI acquisition reduces gray matter volume and thickness estimates.

Authors:  Martin Reuter; M Dylan Tisdall; Abid Qureshi; Randy L Buckner; André J W van der Kouwe; Bruce Fischl
Journal:  Neuroimage       Date:  2014-12-10       Impact factor: 6.556

9.  Motion artifact reduction in pediatric diffusion tensor imaging using fast prospective correction.

Authors:  A Alhamud; Paul A Taylor; Barbara Laughton; André J W van der Kouwe; Ernesta M Meintjes
Journal:  J Magn Reson Imaging       Date:  2014-06-17       Impact factor: 4.813

10.  The Lifespan Human Connectome Project in Development: A large-scale study of brain connectivity development in 5-21 year olds.

Authors:  Leah H Somerville; Susan Y Bookheimer; Randy L Buckner; Gregory C Burgess; Sandra W Curtiss; Mirella Dapretto; Jennifer Stine Elam; Michael S Gaffrey; Michael P Harms; Cynthia Hodge; Sridhar Kandala; Erik K Kastman; Thomas E Nichols; Bradley L Schlaggar; Stephen M Smith; Kathleen M Thomas; Essa Yacoub; David C Van Essen; Deanna M Barch
Journal:  Neuroimage       Date:  2018-08-22       Impact factor: 6.556

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