Literature DB >> 2762114

Sequences flanking the repeat arrays of human minisatellites: association with tandem and dispersed repeat elements.

J A Armour1, Z Wong, V Wilson, N J Royle, A J Jeffreys.   

Abstract

We present DNA sequences flanking cloned hypervariable human minisatellites. In addition to providing confirmatory evidence that minisatellites cluster with other tandem repeats, these flanking sequences contain a high frequency of interspersed repetitive elements. These elements include a retroviral LTR-like sequence, from which one of the minisatellites appears to have expanded, and a recently described short interspersed repeat. We present our own findings concerning this element, in particular that those examples studied do not show significant evolutionary conservation, despite suggestions that the element may have a cis-acting function.

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Year:  1989        PMID： 2762114      PMCID： PMC318084          DOI： 10.1093/nar/17.13.4925

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  27 in total

1.  Rapid and sensitive protein similarity searches.

Authors:  D J Lipman; W R Pearson
Journal:  Science       Date:  1985-03-22       Impact factor: 47.728

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Authors:  A J Jeffreys; V Wilson; S L Thein
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Authors:  P O'Connell; G M Lathrop; M Leppert; Y Nakamura; U Müller; J M Lalouel; R White
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4.  Hypervariable 'minisatellite' regions in human DNA.

Authors:  A J Jeffreys; V Wilson; S L Thein
Journal:  Nature       Date:  1985 Mar 7-13       Impact factor: 49.962

5.  The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.

Authors:  J Vieira; J Messing
Journal:  Gene       Date:  1982-10       Impact factor: 3.688

Review 6.  The Alu family of dispersed repetitive sequences.

Authors:  C W Schmid; W R Jelinek
Journal:  Science       Date:  1982-06-04       Impact factor: 47.728

7.  A comprehensive set of sequence analysis programs for the VAX.

Authors:  J Devereux; P Haeberli; O Smithies
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

8.  Nucleotide sequence of the haptoglobin and haptoglobin-related gene pair. The haptoglobin-related gene contains a retrovirus-like element.

Authors:  N Maeda
Journal:  J Biol Chem       Date:  1985-06-10       Impact factor: 5.157

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  The glyceraldehyde 3 phosphate dehydrogenase gene family: structure of a human cDNA and of an X chromosome linked pseudogene; amazing complexity of the gene family in mouse.

Authors:  A Hanauer; J L Mandel
Journal:  EMBO J       Date:  1984-11       Impact factor: 11.598
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  34 in total

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Authors:  J Murray; J Buard; D L Neil; E Yeramian; K Tamaki; C Hollies; A J Jeffreys
Journal:  Genome Res       Date:  1999-02       Impact factor: 9.043

2.  Role of transposable elements in the propagation of minisatellites in the rice genome.

Authors:  T Inukai
Journal:  Mol Genet Genomics       Date:  2004-02-04       Impact factor: 3.291

3.  Artiodactyl retroposons: association with microsatellites and use in SINEmorph detection by PCR.

Authors:  J Kaukinen; S L Varvio
Journal:  Nucleic Acids Res       Date:  1992-06-25       Impact factor: 16.971

4.  Prototypic sequences for human repetitive DNA.

Authors:  J Jurka; J Walichiewicz; A Milosavljevic
Journal:  J Mol Evol       Date:  1992-10       Impact factor: 2.395

5.  Crystal structures of a DNA octaplex with I-motif of G-quartets and its splitting into two quadruplexes suggest a folding mechanism of eight tandem repeats.

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Journal:  Nucleic Acids Res       Date:  2004-05-07       Impact factor: 16.971

6.  VNTR and microsatellite polymorphisms within the subtelomeric region of 7q.

Authors:  A V Hing; C Helms; H Donis-Keller
Journal:  Am J Hum Genet       Date:  1993-08       Impact factor: 11.025

7.  A recombination hot spot in the Rh genes revealed by analysis of unrelated donors with the rare D-- phenotype.

Authors:  T J Kemp; M Poulter; B Carritt
Journal:  Am J Hum Genet       Date:  1996-11       Impact factor: 11.025

8.  Ubiquitous mammalian-wide interspersed repeats (MIRs) are molecular fossils from the mesozoic era.

Authors:  J Jurka; E Zietkiewicz; D Labuda
Journal:  Nucleic Acids Res       Date:  1995-01-11       Impact factor: 16.971

9.  Local mutagenic impact of insertions of LTR retrotransposons on the mouse genome.

Authors:  Erick Desmarais; Khalid Belkhir; John Carlos Garza; François Bonhomme
Journal:  J Mol Evol       Date:  2006-10-29       Impact factor: 2.395

10.  Different DNA changes in primary and recurrent hepatocellular carcinoma.

Authors:  S F Ding; R P Jalleh; C B Wood; L Bowles; J D Delhanty; J Dooley; N A Habib
Journal:  Gut       Date:  1992-10       Impact factor: 23.059
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