Literature DB >> 1404414

Prototypic sequences for human repetitive DNA.

J Jurka1, J Walichiewicz, A Milosavljevic.   

Abstract

We report a collection of 53 prototypic sequences representing known families of repetitive elements from the human genome. The prototypic sequences are either consensus sequences or selected examples of repetitive sequences. The collection includes: prototypes for high and medium reiteration frequency interspersed repeats, long terminal repeats of endogenous retroviruses, alphoid repeats, telomere-associated repeats, and some miscellaneous repeats. The collection is annotated and available electronically.

Entities:  

Mesh：

Substances：

Year:  1992        PMID： 1404414     DOI： 10.1007/bf00161166

Source DB:  PubMed          Journal:  J Mol Evol        ISSN： 0022-2844            Impact factor:   2.395


  61 in total

Review 1.  Molecular analysis of chromosome breakpoints.

Authors:  J Groffen; A Hermans; G Grosveld; N Heisterkamp
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1989

2.  Cloned extrachromosomal circular DNA copies of the human transposable element THE-1 are related predominantly to a single type of family member.

Authors:  R Misra; A Shih; M Rush; E Wong; C W Schmid
Journal:  J Mol Biol       Date:  1987-07-20       Impact factor: 5.469

3.  Subfamily structure and evolution of the human L1 family of repetitive sequences.

Authors:  J Jurka
Journal:  J Mol Evol       Date:  1989-12       Impact factor: 2.395

4.  Small cytoplasmic Ro RNA pseudogene and an Alu repeat in the human alpha-1 globin gene.

Authors:  J Jurka; T F Smith; D Labuda
Journal:  Nucleic Acids Res       Date:  1988-01-25       Impact factor: 16.971

5.  Alu polymerase chain reaction: a method for rapid isolation of human-specific sequences from complex DNA sources.

Authors:  D L Nelson; S A Ledbetter; L Corbo; M F Victoria; R Ramírez-Solis; T D Webster; D H Ledbetter; C T Caskey
Journal:  Proc Natl Acad Sci U S A       Date:  1989-09       Impact factor: 11.205

6.  Structure of a human retroviral sequence related to mouse mammary tumor virus.

Authors:  F E May; B R Westley
Journal:  J Virol       Date:  1986-11       Impact factor: 5.103

7.  Identification of a conserved sequence in the non-coding regions of many human genes.

Authors:  L A Donehower; B L Slagle; M Wilde; G Darlington; J S Butel
Journal:  Nucleic Acids Res       Date:  1989-01-25       Impact factor: 16.971

8.  A transposon-like element in human DNA.

Authors:  K E Paulson; N Deka; C W Schmid; R Misra; C W Schindler; M G Rush; L Kadyk; L Leinwand
Journal:  Nature       Date:  1985 Jul 25-31       Impact factor: 49.962

9.  The human apolipoprotein C-II gene sequence contains a novel chromosome 19-specific minisatellite in its third intron.

Authors:  H K Das; C L Jackson; D A Miller; T Leff; J L Breslow
Journal:  J Biol Chem       Date:  1987-04-05       Impact factor: 5.157

10.  Cloning of decay-accelerating factor suggests novel use of splicing to generate two proteins.

Authors:  I W Caras; M A Davitz; L Rhee; G Weddell; D W Martin; V Nussenzweig
Journal:  Nature       Date:  1987 Feb 5-11       Impact factor: 49.962
View more
  34 in total

Review 1.  Omiga: a PC-based sequence analysis tool.

Authors:  J A Kramer
Journal:  Mol Biotechnol       Date:  2001-09       Impact factor: 2.695

2.  Repbase Update, a database of repetitive elements in eukaryotic genomes.

Authors:  Weidong Bao; Kenji K Kojima; Oleksiy Kohany
Journal:  Mob DNA       Date:  2015-06-02

3.  Simple repetitive DNA sequences from primates: compilation and analysis.

Authors:  J Jurka; C Pethiyagoda
Journal:  J Mol Evol       Date:  1995-02       Impact factor: 2.395

Review 4.  The Staden sequence analysis package.

Authors:  R Staden
Journal:  Mol Biotechnol       Date:  1996-06       Impact factor: 2.695

5.  Divergent intron arrangement in the MB1/LMP7 proteasome gene pair.

Authors:  S Abdulla; S Beck; M Belich; A Jackson; T Nakamura; J Trowsdale
Journal:  Immunogenetics       Date:  1996       Impact factor: 2.846

6.  Microsatellite spreading in the human genome: evolutionary mechanisms and structural implications.

Authors:  E Nadir; H Margalit; T Gallily; S A Ben-Sasson
Journal:  Proc Natl Acad Sci U S A       Date:  1996-06-25       Impact factor: 11.205

7.  Members of the pogo superfamily of DNA-mediated transposons in the human genome.

Authors:  H M Robertson
Journal:  Mol Gen Genet       Date:  1996-10-28

8.  Representation of cloned genomic sequences in two sequencing vectors: correlation of DNA sequence and subclone distribution.

Authors:  S L Chissoe; M A Marra; L Hillier; R Brinkman; R K Wilson; R H Waterston
Journal:  Nucleic Acids Res       Date:  1997-08-01       Impact factor: 16.971

9.  The EMBL Nucleotide Sequence Database.

Authors:  G Stoesser; P Sterk; M A Tuli; P J Stoehr; G N Cameron
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

10.  Quantification of DNA patchiness using long-range correlation measures.

Authors:  G M Viswanathan; S V Buldyrev; S Havlin; H E Stanley
Journal:  Biophys J       Date:  1997-02       Impact factor: 4.033
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.