Literature DB >> 27339138

Dynamics and mechanism of ultrafast water-protein interactions.

Yangzhong Qin1, Lijuan Wang1, Dongping Zhong2.   

Abstract

Protein hydration is essential to its structure, dynamics, and function, but water-protein interactions have not been directly observed in real time at physiological temperature to our awareness. By using a tryptophan scan with femtosecond spectroscopy, we simultaneously measured the hydration water dynamics and protein side-chain motions with temperature dependence. We observed the heterogeneous hydration dynamics around the global protein surface with two types of coupled motions, collective water/side-chain reorientation in a few picoseconds and cooperative water/side-chain restructuring in tens of picoseconds. The ultrafast dynamics in hundreds of femtoseconds is from the outer-layer, bulk-type mobile water molecules in the hydration shell. We also found that the hydration water dynamics are always faster than protein side-chain relaxations but with the same energy barriers, indicating hydration shell fluctuations driving protein side-chain motions on the picosecond time scales and thus elucidating their ultimate relationship.

Entities:  

Keywords:  coupled fluctuation; hydration shell dynamics; protein side-chain motion; tryptophan scan; water-driven relaxation

Mesh:

Substances:

Year:  2016        PMID: 27339138      PMCID: PMC4968723          DOI: 10.1073/pnas.1602916113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

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