Literature DB >> 28956172

Ion-induced alterations of the local hydration environment elucidate Hofmeister effect in a simple classical model of Trp-cage miniprotein.

Z Násztor1, A Dér2, F Bogár3,4.   

Abstract

Protein stability is known to be influenced by the presence of Hofmeister active ions in the solution. In addition to direct ion-protein interactions, this influence manifests through the local alterations of the interfacial water structure induced by the anions and cations present in this region. In our earlier works it was pointed out that the effects of Hofmeister active salts on the stability of Trp-cage miniprotein can be modeled qualitatively using non-polarizable force fields. These simulations reproduced the structure-stabilization and structure-destabilization effects of selected kosmotropic and chaotropic salts, respectively. In the present study we use the same model system to elucidate atomic processes behind the chaotropic destabilization and kosmotropic stabilization of the miniprotein. We focus on changes of the local hydration environment of the miniprotein upon addition of NaClO4 and NaF salts to the solution. The process is separated into two parts. In the first, 'promotion' phase, the protein structure is fixed, and the local hydration properties induced by the simultaneous presence of protein and ions are investigated, with a special focus on the interaction of Hofmeister active anions with the charged and polar sites. In the second, 'rearrangement' phase we follow changes of the hydration of ions and the protein, accompanying the conformational relaxation of the protein. We identify significant factors of an enthalpic and entropic nature behind the ion-induced free energy changes of the protein-water system, and also propose a possible atomic mechanism consistent with the Collins's rule, for the chaotropic destabilization and kosmotropic stabilization of protein conformation.

Entities:  

Keywords:  Chaotropic destabilization; Hofmeister effect; Kosmotropic stabilization; Molecular dynamics; Non-polarizable force-field

Mesh:

Substances:

Year:  2017        PMID: 28956172     DOI: 10.1007/s00894-017-3471-0

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  47 in total

1.  Fluctuations and the Hofmeister effect.

Authors:  A Neagu; M Neagu; A Dér
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

Review 2.  Hofmeister phenomena: an update on ion specificity in biology.

Authors:  Pierandrea Lo Nostro; Barry W Ninham
Journal:  Chem Rev       Date:  2012-01-17       Impact factor: 60.622

Review 3.  The Hofmeister series: salt and solvent effects on interfacial phenomena.

Authors:  M G Cacace; E M Landau; J J Ramsden
Journal:  Q Rev Biophys       Date:  1997-08       Impact factor: 5.318

4.  On the Hofmeister effect: fluctuations at the protein-water interface and the surface tension.

Authors:  Ferenc Bogár; Ferenc Bartha; Zoltán Násztor; László Fábián; Balázs Leitgeb; András Dér
Journal:  J Phys Chem B       Date:  2014-07-10       Impact factor: 2.991

Review 5.  The Hofmeister effect and the behaviour of water at interfaces.

Authors:  K D Collins; M W Washabaugh
Journal:  Q Rev Biophys       Date:  1985-11       Impact factor: 5.318

6.  Conformational dynamics of the trp-cage miniprotein at its folding temperature.

Authors:  Anna Hałabis; Wioletta Żmudzińska; Adam Liwo; Stanisław Ołdziej
Journal:  J Phys Chem B       Date:  2012-04-22       Impact factor: 2.991

Review 7.  Hofmeister series and specific interactions of charged headgroups with aqueous ions.

Authors:  Nina Vlachy; Barbara Jagoda-Cwiklik; Robert Vácha; Didier Touraud; Pavel Jungwirth; Werner Kunz
Journal:  Adv Colloid Interface Sci       Date:  2008-10-07       Impact factor: 12.984

8.  Sticky ions in biological systems.

Authors:  K D Collins
Journal:  Proc Natl Acad Sci U S A       Date:  1995-06-06       Impact factor: 11.205

9.  Improved side-chain torsion potentials for the Amber ff99SB protein force field.

Authors:  Kresten Lindorff-Larsen; Stefano Piana; Kim Palmo; Paul Maragakis; John L Klepeis; Ron O Dror; David E Shaw
Journal:  Proteins       Date:  2010-06

10.  Differential Impact of the Monovalent Ions Li⁺, Na⁺, K⁺, and Rb⁺ on DNA Conformational Properties.

Authors:  Alexey Savelyev; Alexander D MacKerell
Journal:  J Phys Chem Lett       Date:  2015-01-02       Impact factor: 6.475

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