Literature DB >> 32061242

Nonequilibrium dynamics of photoinduced forward and backward electron transfer reactions.

Yangyi Lu1, Dongping Zhong1.   

Abstract

The biological functions of photoenzymes are often triggered by photoinduced electron transfer (ET) reactions. An ultrafast backward ET (BET) reaction follows the initial photoinduced forward ET (FET), which dissipates the energy of absorbed photons and terminates the biological function in vain. Based upon our previous works, we reasoned that the dynamics of the BET is coupled with that of the FET and other local motions. In this work, the dynamics of the FET and BET is modeled as the master equation of the reduced density operator of a three-state system coupled with a classical harmonic reservoir. The coupling of the FET and BET is reflected in the time-evolution of the charge-transfer state's population, which is generated by a source, the reaction flux for the FET, and annihilated by a sink, the reaction flux for the BET. Surprisingly, numerical simulations show that when the BET is in the Marcus normal region, the BET can be accelerated by nonequilibrium local motions and becomes faster than what is predicted by the Marcus theory. The experimental confirmation of this novel dynamics would provide qualitative evidence for nonequilibrium effects on ultrafast ET dynamics. Additionally, the effects of quantum vibrational modes on the dynamics are discussed. This work can help understand the dynamical interactions between the chain of ultrafast reactions and the complex local environmental motions, revealing the physical nature underlying biological functions.

Mesh:

Year:  2020        PMID: 32061242      PMCID: PMC7012650          DOI: 10.1063/1.5132814

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  22 in total

1.  Natural engineering principles of electron tunnelling in biological oxidation-reduction.

Authors:  C C Page; C C Moser; X Chen; P L Dutton
Journal:  Nature       Date:  1999-11-04       Impact factor: 49.962

Review 2.  Protein electron transfer: is biology (thermo)dynamic?

Authors:  Dmitry V Matyushov
Journal:  J Phys Condens Matter       Date:  2015-11-12       Impact factor: 2.333

3.  Electron tunneling pathways and role of adenine in repair of cyclobutane pyrimidine dimer by DNA photolyase.

Authors:  Zheyun Liu; Xunmin Guo; Chuang Tan; Jiang Li; Ya-Ting Kao; Lijuan Wang; Aziz Sancar; Dongping Zhong
Journal:  J Am Chem Soc       Date:  2012-05-04       Impact factor: 15.419

4.  Protein dynamics control the kinetics of initial electron transfer in photosynthesis.

Authors:  Haiyu Wang; Su Lin; James P Allen; Joann C Williams; Sean Blankert; Christa Laser; Neal W Woodbury
Journal:  Science       Date:  2007-05-04       Impact factor: 47.728

5.  Vibrational modes and the dynamic solvent effect in electron and proton transfer.

Authors:  P F Barbara; G C Walker; T P Smith
Journal:  Science       Date:  1992-05-15       Impact factor: 47.728

6.  Protein electron transfer: Dynamics and statistics.

Authors:  Dmitry V Matyushov
Journal:  J Chem Phys       Date:  2013-07-14       Impact factor: 3.488

7.  Determining complete electron flow in the cofactor photoreduction of oxidized photolyase.

Authors:  Zheyun Liu; Chuang Tan; Xunmin Guo; Jiang Li; Lijuan Wang; Aziz Sancar; Dongping Zhong
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-23       Impact factor: 11.205

8.  The molecular origin of high DNA-repair efficiency by photolyase.

Authors:  Chuang Tan; Zheyun Liu; Jiang Li; Xunmin Guo; Lijuan Wang; Aziz Sancar; Dongping Zhong
Journal:  Nat Commun       Date:  2015-06-11       Impact factor: 14.919

9.  Dynamics and mechanism of ultrafast water-protein interactions.

Authors:  Yangzhong Qin; Lijuan Wang; Dongping Zhong
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-23       Impact factor: 11.205

Review 10.  Photolyase: Dynamics and Mechanisms of Repair of Sun-Induced DNA Damage.

Authors:  Meng Zhang; Lijuan Wang; Dongping Zhong
Journal:  Photochem Photobiol       Date:  2017-01-25       Impact factor: 3.421

View more
  2 in total

1.  Exact eigenenergies of a model of vibronically coupled electron transfer reactions.

Authors:  Yangyi Lu; Dongping Zhong
Journal:  Chem Phys       Date:  2021-04-27       Impact factor: 2.552

2.  Tuning Proton Transfer Thermodynamics in SARS-Cov-2 Main Protease: Implications for Catalysis and Inhibitor Design.

Authors:  Laura Zanetti-Polzi; Micholas Dean Smith; Chris Chipot; James C Gumbart; Diane L Lynch; Anna Pavlova; Jeremy C Smith; Isabella Daidone
Journal:  ChemRxiv       Date:  2020-11-06
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.