Literature DB >> 27301662

Recent advances of Diels-Alderases involved in natural product biosynthesis.

Atsushi Minami1, Hideaki Oikawa1.   

Abstract

Frequent occurrence of [4+2] adducts in the secondary metabolites suggested involvement of Diels-Alderases (DAases) in their biosynthesis. However, a limited number of DAases were reported before early 2000s. Advancements in whole-genome sequencing and searching tool of the biosynthetic gene clusters of the secondary metabolites facilitate the identification of plausible DAases. Thus, during past 5 years, nine DAases have been characterized by genetic and biochemical analyses. These include a detailed functional analysis of SpnF that solely catalyzes [4+2] cycloaddition, a structural analysis of spirotetramate-forming enzyme PyrI4 complexed with the corresponding cycloadduct, and DAases catalyzing decalin formation and macrocyclic pyridine formation. Together with decalin-forming enzymes and macrocyclic pyridine-forming enzymes, these results provided sufficient data to discuss catalytic mechanism of DAases and nature's strategy for molecular diversification of linear chain intermediates derived from polyketide and ribosomal peptide biosynthetic machinery.

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Year:  2016        PMID: 27301662     DOI: 10.1038/ja.2016.67

Source DB:  PubMed          Journal:  J Antibiot (Tokyo)        ISSN: 0021-8820            Impact factor:   2.649


  40 in total

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2.  Genetic characterization of the chlorothricin gene cluster as a model for spirotetronate antibiotic biosynthesis.

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Journal:  Chem Biol       Date:  2006-06

3.  Heterologous expression of highly reducing polyketide synthase involved in betaenone biosynthesis.

Authors:  Takahiro Ugai; Atsushi Minami; Ryuya Fujii; Mizuki Tanaka; Hiroki Oguri; Katsuya Gomi; Hideaki Oikawa
Journal:  Chem Commun (Camb)       Date:  2015-02-04       Impact factor: 6.222

4.  Solanapyrone synthase, a possible Diels-Alderase and iterative type I polyketide synthase encoded in a biosynthetic gene cluster from Alternaria solani.

Authors:  Ken Kasahara; Takanori Miyamoto; Takashi Fujimoto; Hiroki Oguri; Tetsuo Tokiwano; Hideaki Oikawa; Yutaka Ebizuka; Isao Fujii
Journal:  Chembiochem       Date:  2010-06-14       Impact factor: 3.164

5.  Generation of thiocillin ring size variants by prepeptide gene replacement and in vivo processing by Bacillus cereus.

Authors:  Albert A Bowers; Michael G Acker; Travis S Young; Christopher T Walsh
Journal:  J Am Chem Soc       Date:  2012-06-15       Impact factor: 15.419

6.  An enzymatic [4+2] cyclization cascade creates the pentacyclic core of pyrroindomycins.

Authors:  Zhenhua Tian; Peng Sun; Yan Yan; Zhuhua Wu; Qingfei Zheng; Shuaixiang Zhou; Hua Zhang; Futao Yu; Xinying Jia; Dandan Chen; Attila Mándi; Tibor Kurtán; Wen Liu
Journal:  Nat Chem Biol       Date:  2015-03-02       Impact factor: 15.040

7.  Fusarisetin A, an acinar morphogenesis inhibitor from a soil fungus, Fusarium sp. FN080326.

Authors:  Jae-Hyuk Jang; Yukihiro Asami; Jun-Pil Jang; Sun-Ok Kim; Dong Oh Moon; Kee-Sun Shin; Daisuke Hashizume; Makoto Muroi; Tamio Saito; Hyuncheol Oh; Bo Yeon Kim; Hiroyuki Osada; Jong Seog Ahn
Journal:  J Am Chem Soc       Date:  2011-04-18       Impact factor: 15.419

8.  Elucidation of the kijanimicin gene cluster: insights into the biosynthesis of spirotetronate antibiotics and nitrosugars.

Authors:  Hua Zhang; Jess A White-Phillip; Charles E Melançon; Hyung-jin Kwon; Wei-luen Yu; Hung-wen Liu
Journal:  J Am Chem Soc       Date:  2007-11-07       Impact factor: 15.419

9.  Complete reconstitution of a highly reducing iterative polyketide synthase.

Authors:  Suzanne M Ma; Jesse W-H Li; Jin W Choi; Hui Zhou; K K Michael Lee; Vijayalakshmi A Moorthie; Xinkai Xie; James T Kealey; Nancy A Da Silva; John C Vederas; Yi Tang
Journal:  Science       Date:  2009-10-23       Impact factor: 47.728

10.  Pyrroindomycins, novel antibiotics produced by Streptomyces rugosporus LL-42D005. II. Biological activities.

Authors:  M P Singh; P J Petersen; N V Jacobus; M J Mroczenski-Wildey; W M Maiese; M Greenstein; D A Steinberg
Journal:  J Antibiot (Tokyo)       Date:  1994-11       Impact factor: 2.649

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  29 in total

Review 1.  Oxidative Cyclization in Natural Product Biosynthesis.

Authors:  Man-Cheng Tang; Yi Zou; Kenji Watanabe; Christopher T Walsh; Yi Tang
Journal:  Chem Rev       Date:  2016-12-12       Impact factor: 60.622

Review 2.  Enzymatic Cascade Reactions in Biosynthesis.

Authors:  Christopher T Walsh; Bradley S Moore
Journal:  Angew Chem Int Ed Engl       Date:  2019-02-20       Impact factor: 15.336

Review 3.  Natural [4 + 2]-Cyclases.

Authors:  Byung-Sun Jeon; Shao-An Wang; Mark W Ruszczycky; Hung-Wen Liu
Journal:  Chem Rev       Date:  2016-12-01       Impact factor: 60.622

4.  Total synthesis of brevianamide A.

Authors:  Robert C Godfrey; Nicholas J Green; Gary S Nichol; Andrew L Lawrence
Journal:  Nat Chem       Date:  2020-04-13       Impact factor: 24.427

Review 5.  Recent Advances in Enzymatic Complexity Generation: Cyclization Reactions.

Authors:  Christopher T Walsh; Yi Tang
Journal:  Biochemistry       Date:  2017-12-20       Impact factor: 3.162

Review 6.  The expanding world of biosynthetic pericyclases: cooperation of experiment and theory for discovery.

Authors:  Cooper S Jamieson; Masao Ohashi; Fang Liu; Yi Tang; K N Houk
Journal:  Nat Prod Rep       Date:  2019-05-22       Impact factor: 13.423

7.  FAD-dependent enzyme-catalysed intermolecular [4+2] cycloaddition in natural product biosynthesis.

Authors:  Lei Gao; Cong Su; Xiaoxia Du; Ruishan Wang; Shuming Chen; Yu Zhou; Chengwei Liu; Xiaojing Liu; Runze Tian; Liyun Zhang; Kebo Xie; She Chen; Qianqian Guo; Lanping Guo; Yoshio Hano; Manabu Shimazaki; Atsushi Minami; Hideaki Oikawa; Niu Huang; K N Houk; Luqi Huang; Jungui Dai; Xiaoguang Lei
Journal:  Nat Chem       Date:  2020-05-25       Impact factor: 24.427

8.  Thiopeptide Pyridine Synthase TbtD Catalyzes an Intermolecular Formal Aza-Diels-Alder Reaction.

Authors:  Jonathan W Bogart; Albert A Bowers
Journal:  J Am Chem Soc       Date:  2019-01-22       Impact factor: 15.419

9.  Genome-Mined Diels-Alderase Catalyzes Formation of the cis-Octahydrodecalins of Varicidin A and B.

Authors:  Dan Tan; Cooper S Jamieson; Masao Ohashi; Man-Cheng Tang; K N Houk; Yi Tang
Journal:  J Am Chem Soc       Date:  2019-01-08       Impact factor: 15.419

10.  Biochemical Characterization of a Eukaryotic Decalin-Forming Diels-Alderase.

Authors:  Li Li; Peiyuan Yu; Man-Cheng Tang; Yi Zou; Shu-Shan Gao; Yiu-Sun Hung; Muxun Zhao; Kenji Watanabe; K N Houk; Yi Tang
Journal:  J Am Chem Soc       Date:  2016-11-30       Impact factor: 15.419

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