Literature DB >> 30609896

Genome-Mined Diels-Alderase Catalyzes Formation of the cis-Octahydrodecalins of Varicidin A and B.

Dan Tan1, Cooper S Jamieson, Masao Ohashi, Man-Cheng Tang, K N Houk, Yi Tang.   

Abstract

Pericyclases are an emerging family of enzymes catalyzing pericyclic reactions. A class of lipocalin-like enzymes recently characterized as Diels-Alderases (DAses) catalyze decalin formation through intramolecular Diels-Alder (IMDA) reactions between electron-rich dienes and electron-deficient dienophiles. Using this class of enzyme as a beacon for genome mining, we discovered a biosynthetic gene cluster from Penicillium variabile and identified that it encodes for the biosynthesis of varicidin A (1), a new antifungal natural product containing a cis-octahydrodecalin core. Biochemical analysis reveals a carboxylative deactivation strategy used in varicidin biosynthesis to suppress the nonenzymatic IMDA reaction of an early acyclic intermediate that favors trans-decalin formation. A P450 oxidizes the reactive intermediate to yield a relatively unreactive combination of an electron-deficient diene and an electron-deficient dienophile. The DAse PvhB catalyzes the final stage IMDA on the carboxylated intermediate to form the cis-decalin that is important for the antifungal activity.

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Year:  2019        PMID: 30609896      PMCID: PMC6475471          DOI: 10.1021/jacs.8b12010

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  27 in total

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Journal:  Biochim Biophys Acta       Date:  2000-10-18

2.  Energies, structures, and electronic properties of molecules in solution with the C-PCM solvation model.

Authors:  Maurizio Cossi; Nadia Rega; Giovanni Scalmani; Vincenzo Barone
Journal:  J Comput Chem       Date:  2003-04-30       Impact factor: 3.376

3.  Characteristics of the two frontier orbital interactions in the Diels-Alder cycloaddition.

Authors:  Claude Spino; Hadi Rezaei; Yves L Dory
Journal:  J Org Chem       Date:  2004-02-06       Impact factor: 4.354

Review 4.  Enzymatic catalysis of the Diels-Alder reaction in the biosynthesis of natural products.

Authors:  Hideaki Oikawa; Tetsuo Tokiwano
Journal:  Nat Prod Rep       Date:  2004-05-03       Impact factor: 13.423

Review 5.  Recent advances in natural product synthesis by using intramolecular Diels-Alder reactions.

Authors:  Ken-Ichi Takao; Ryosuke Munakata; Kin-ichi Tadano
Journal:  Chem Rev       Date:  2005-12       Impact factor: 60.622

6.  Density functionals with broad applicability in chemistry.

Authors:  Yan Zhao; Donald G Truhlar
Journal:  Acc Chem Res       Date:  2008-01-11       Impact factor: 22.384

Review 7.  The Diels--Alder reaction in total synthesis.

Authors:  K C Nicolaou; Scott A Snyder; Tamsyn Montagnon; Georgios Vassilikogiannakis
Journal:  Angew Chem Int Ed Engl       Date:  2002-05-17       Impact factor: 15.336

8.  Intramolecular Diels-Alder reactions of cyclopropenone ketals.

Authors:  Paresma R Patel; Dale L Boger
Journal:  Org Lett       Date:  2010-08-06       Impact factor: 6.005

9.  CDASE--a reliable scheme to explain the reactivity sequence between Diels-Alder pairs.

Authors:  Soumen Saha; Ram Kinkar Roy; Sourav Pal
Journal:  Phys Chem Chem Phys       Date:  2010-07-02       Impact factor: 3.676

10.  Enzyme-catalysed [4+2] cycloaddition is a key step in the biosynthesis of spinosyn A.

Authors:  Hak Joong Kim; Mark W Ruszczycky; Sei-hyun Choi; Yung-nan Liu; Hung-wen Liu
Journal:  Nature       Date:  2011-05-05       Impact factor: 49.962

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  13 in total

1.  Enzymatic Intermolecular Hetero-Diels-Alder Reaction in the Biosynthesis of Tropolonic Sesquiterpenes.

Authors:  Qibin Chen; Jie Gao; Cooper Jamieson; Jiawang Liu; Masao Ohashi; Jian Bai; Daojian Yan; Bingyu Liu; Yongsheng Che; Yanan Wang; K N Houk; Youcai Hu
Journal:  J Am Chem Soc       Date:  2019-09-03       Impact factor: 15.419

2.  FAD-dependent enzyme-catalysed intermolecular [4+2] cycloaddition in natural product biosynthesis.

Authors:  Lei Gao; Cong Su; Xiaoxia Du; Ruishan Wang; Shuming Chen; Yu Zhou; Chengwei Liu; Xiaojing Liu; Runze Tian; Liyun Zhang; Kebo Xie; She Chen; Qianqian Guo; Lanping Guo; Yoshio Hano; Manabu Shimazaki; Atsushi Minami; Hideaki Oikawa; Niu Huang; K N Houk; Luqi Huang; Jungui Dai; Xiaoguang Lei
Journal:  Nat Chem       Date:  2020-05-25       Impact factor: 24.427

3.  Enzyme-Catalyzed Inverse-Electron Demand Diels-Alder Reaction in the Biosynthesis of Antifungal Ilicicolin H.

Authors:  Zhuan Zhang; Cooper S Jamieson; Yi-Lei Zhao; Dehai Li; Masao Ohashi; K N Houk; Yi Tang
Journal:  J Am Chem Soc       Date:  2019-03-26       Impact factor: 15.419

4.  Catalytic mechanism and endo-to-exo selectivity reversion of an octalin-forming natural Diels-Alderase.

Authors:  Michio Sato; Shinji Kishimoto; Mamoru Yokoyama; Cooper S Jamieson; Kazuto Narita; Naoya Maeda; Kodai Hara; Hiroshi Hashimoto; Yuta Tsunematsu; Kendall N Houk; Yi Tang; Kenji Watanabe
Journal:  Nat Catal       Date:  2021-03-01

5.  Combining iminium and supramolecular catalysis for the [4 + 2] cycloaddition of E-cinnamaldehydes.

Authors:  Kendra K Shrestha; Michael A Hilyard; Indunil Alahakoon; Michael C Young
Journal:  Org Biomol Chem       Date:  2022-08-24       Impact factor: 3.890

6.  Mechanism of the Stereoselective Catalysis of Diels-Alderase PyrE3 Involved in Pyrroindomycin Biosynthesis.

Authors:  Bo Li; Xingyi Guan; Song Yang; Yike Zou; Wen Liu; K N Houk
Journal:  J Am Chem Soc       Date:  2022-03-08       Impact factor: 16.383

Review 7.  A Decade of Antifungal Leads from Natural Products: 2010-2019.

Authors:  Mohammed Aldholmi; Pascal Marchand; Isabelle Ourliac-Garnier; Patrice Le Pape; A Ganesan
Journal:  Pharmaceuticals (Basel)       Date:  2019-12-12

Review 8.  Regulation of Secondary Metabolism in the Penicillium Genus.

Authors:  Christelle El Hajj Assaf; Chrystian Zetina-Serrano; Nadia Tahtah; André El Khoury; Ali Atoui; Isabelle P Oswald; Olivier Puel; Sophie Lorber
Journal:  Int J Mol Sci       Date:  2020-12-12       Impact factor: 5.923

9.  Total synthesis of nahuoic acid A via a putative biogenetic intramolecular Diels-Alder (IMDA) reaction.

Authors:  Lucía Guillade; Paula Mora; Pedro Villar; Rosana Alvarez; Angel R de Lera
Journal:  Chem Sci       Date:  2021-10-27       Impact factor: 9.825

Review 10.  Mining and unearthing hidden biosynthetic potential.

Authors:  Kirstin Scherlach; Christian Hertweck
Journal:  Nat Commun       Date:  2021-06-23       Impact factor: 14.919

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