Literature DB >> 32451436

FAD-dependent enzyme-catalysed intermolecular [4+2] cycloaddition in natural product biosynthesis.

Lei Gao1,2, Cong Su1, Xiaoxia Du2, Ruishan Wang3, Shuming Chen4, Yu Zhou5, Chengwei Liu6, Xiaojing Liu2, Runze Tian2, Liyun Zhang2, Kebo Xie1, She Chen5, Qianqian Guo2, Lanping Guo3, Yoshio Hano7, Manabu Shimazaki7, Atsushi Minami6, Hideaki Oikawa6, Niu Huang5, K N Houk4, Luqi Huang8, Jungui Dai9, Xiaoguang Lei10.   

Abstract

The Diels-Alder reaction is one of the most powerful and widely used methods in synthetic chemistry for the stereospecific construction of carbon-carbon bonds. Despite the importance of Diels-Alder reactions in the biosynthesis of numerous secondary metabolites, no naturally occurring stand-alone Diels-Alderase has been demonstrated to catalyse intermolecular Diels-Alder transformations. Here we report a flavin adenine dinucleotide-dependent enzyme, Morus alba Diels-Alderase (MaDA), from Morus cell cultures, that catalyses an intermolecular [4+2] cycloaddition to produce the natural isoprenylated flavonoid chalcomoracin with a high efficiency and enantioselectivity. Density functional theory calculations and preliminary measurements of the kinetic isotope effects establish a concerted but asynchronous pericyclic pathway. Structure-guided mutagenesis and docking studies demonstrate the interactions of MaDA with the diene and dienophile to catalyse the [4+2] cycloaddition. MaDA exhibits a substrate promiscuity towards both dienes and dienophiles, which enables the expedient syntheses of structurally diverse natural products. We also report a biosynthetic intermediate probe (BIP)-based target identification strategy used to discover MaDA.

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Year:  2020        PMID: 32451436     DOI: 10.1038/s41557-020-0467-7

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  46 in total

1.  Insight into a natural Diels-Alder reaction from the structure of macrophomate synthase.

Authors:  Toyoyuki Ose; Kenji Watanabe; Takashi Mie; Mamoru Honma; Hiromi Watanabe; Min Yao; Hideaki Oikawa; Isao Tanaka
Journal:  Nature       Date:  2003-03-13       Impact factor: 49.962

Review 2.  Enzymatic catalysis of the Diels-Alder reaction in the biosynthesis of natural products.

Authors:  Hideaki Oikawa; Tetsuo Tokiwano
Journal:  Nat Prod Rep       Date:  2004-05-03       Impact factor: 13.423

Review 3.  Natural [4 + 2]-Cyclases.

Authors:  Byung-Sun Jeon; Shao-An Wang; Mark W Ruszczycky; Hung-Wen Liu
Journal:  Chem Rev       Date:  2016-12-01       Impact factor: 60.622

4.  Solanapyrone synthase, a possible Diels-Alderase and iterative type I polyketide synthase encoded in a biosynthetic gene cluster from Alternaria solani.

Authors:  Ken Kasahara; Takanori Miyamoto; Takashi Fujimoto; Hiroki Oguri; Tetsuo Tokiwano; Hideaki Oikawa; Yutaka Ebizuka; Isao Fujii
Journal:  Chembiochem       Date:  2010-06-14       Impact factor: 3.164

Review 5.  The expanding world of biosynthetic pericyclases: cooperation of experiment and theory for discovery.

Authors:  Cooper S Jamieson; Masao Ohashi; Fang Liu; Yi Tang; K N Houk
Journal:  Nat Prod Rep       Date:  2019-05-22       Impact factor: 13.423

Review 6.  Recent advances of Diels-Alderases involved in natural product biosynthesis.

Authors:  Atsushi Minami; Hideaki Oikawa
Journal:  J Antibiot (Tokyo)       Date:  2016-06-15       Impact factor: 2.649

7.  Natural Diels-Alderases: Elusive and Irresistable.

Authors:  Kimberly Klas; Sachiko Tsukamoto; David H Sherman; Robert M Williams
Journal:  J Org Chem       Date:  2015-12-04       Impact factor: 4.354

8.  Enzyme-catalysed [4+2] cycloaddition is a key step in the biosynthesis of spinosyn A.

Authors:  Hak Joong Kim; Mark W Ruszczycky; Sei-hyun Choi; Yung-nan Liu; Hung-wen Liu
Journal:  Nature       Date:  2011-05-05       Impact factor: 49.962

9.  Biosynthesis of versipelostatin: identification of an enzyme-catalyzed [4+2]-cycloaddition required for macrocyclization of spirotetronate-containing polyketides.

Authors:  Takuya Hashimoto; Junko Hashimoto; Kuniko Teruya; Takashi Hirano; Kazuo Shin-ya; Haruo Ikeda; Hung-wen Liu; Makoto Nishiyama; Tomohisa Kuzuyama
Journal:  J Am Chem Soc       Date:  2015-01-05       Impact factor: 15.419

10.  In Vitro Biosynthesis of the Core Scaffold of the Thiopeptide Thiomuracin.

Authors:  Graham A Hudson; Zhengan Zhang; Jonathan I Tietz; Douglas A Mitchell; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2015-12-21       Impact factor: 15.419

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  13 in total

1.  Byproduct formation during the biosynthesis of spinosyn A and evidence for an enzymatic interplay to prevent its formation.

Authors:  Byung-Sun Jeon; Teng-Yi Huang; Mark W Ruszczycky; Sei-Hyun Choi; Namho Kim; Joseph Livy Franklin; Shang-Cheng Hung; Hung-Wen Liu
Journal:  Tetrahedron       Date:  2021-11-22       Impact factor: 2.388

Review 2.  Mulberry Diels-Alder-type adducts: isolation, structure, bioactivity, and synthesis.

Authors:  Si-Yuan Luo; Jun-Yu Zhu; Ming-Feng Zou; Sheng Yin; Gui-Hua Tang
Journal:  Nat Prod Bioprospect       Date:  2022-09-02

3.  Mechanism of the Stereoselective Catalysis of Diels-Alderase PyrE3 Involved in Pyrroindomycin Biosynthesis.

Authors:  Bo Li; Xingyi Guan; Song Yang; Yike Zou; Wen Liu; K N Houk
Journal:  J Am Chem Soc       Date:  2022-03-08       Impact factor: 16.383

4.  Crystal Structures of Fsa2 and Phm7 Catalyzing [4 + 2] Cycloaddition Reactions with Reverse Stereoselectivities in Equisetin and Phomasetin Biosynthesis.

Authors:  Changbiao Chi; Zhengdong Wang; Tan Liu; Zhongyi Zhang; Huan Zhou; Annan Li; Hongwei Jin; Hongli Jia; Fuling Yin; Donghui Yang; Ming Ma
Journal:  ACS Omega       Date:  2021-05-06

Review 5.  Biosynthesis and synthetic biology of psychoactive natural products.

Authors:  Cooper S Jamieson; Joshua Misa; Yi Tang; John M Billingsley
Journal:  Chem Soc Rev       Date:  2021-06-21       Impact factor: 60.615

Review 6.  Harnessing ortho-Quinone Methides in Natural Product Biosynthesis and Biocatalysis.

Authors:  Trevor N Purdy; Bradley S Moore; April L Lukowski
Journal:  J Nat Prod       Date:  2022-02-02       Impact factor: 4.803

Review 7.  Synthetic biology of plant natural products: From pathway elucidation to engineered biosynthesis in plant cells.

Authors:  Xiaoxi Zhu; Xiaonan Liu; Tian Liu; Yina Wang; Nida Ahmed; Zhichao Li; Huifeng Jiang
Journal:  Plant Commun       Date:  2021-08-09

Review 8.  Discovery and investigation of natural Diels-Alderases.

Authors:  Kenji Watanabe
Journal:  J Nat Med       Date:  2021-03-08       Impact factor: 2.343

Review 9.  Multi-Omics-Based Discovery of Plant Signaling Molecules.

Authors:  Fei Luo; Zongjun Yu; Qian Zhou; Ancheng Huang
Journal:  Metabolites       Date:  2022-01-13

10.  Origin and Evolution of the Cannabinoid Oxidocyclase Gene Family.

Authors:  Robin van Velzen; M Eric Schranz
Journal:  Genome Biol Evol       Date:  2021-08-03       Impact factor: 3.416

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