Literature DB >> 26283392

Structure of BipA in GTP form bound to the ratcheted ribosome.

Veerendra Kumar1, Yun Chen2, Rya Ero2, Tofayel Ahmed2, Jackie Tan2, Zhe Li3, Andrew See Weng Wong2, Shashi Bhushan4, Yong-Gui Gao5.   

Abstract

BPI-inducible protein A (BipA) is a member of the family of ribosome-dependent translational GTPase (trGTPase) factors along with elongation factors G and 4 (EF-G and EF4). Despite being highly conserved in bacteria and playing a critical role in coordinating cellular responses to environmental changes, its structures (isolated and ribosome bound) remain elusive. Here, we present the crystal structures of apo form and GTP analog, GDP, and guanosine-3',5'-bisdiphosphate (ppGpp)-bound BipA. In addition to having a distinctive domain arrangement, the C-terminal domain of BipA has a unique fold. Furthermore, we report the cryo-electron microscopy structure of BipA bound to the ribosome in its active GTP form and elucidate the unique structural attributes of BipA interactions with the ribosome and A-site tRNA in the light of its possible function in regulating translation.

Entities:  

Keywords:  BipA; X-ray crystallography; cryo-electron microscopy; ribosome; translational GTPase factors

Mesh:

Substances:

Year:  2015        PMID: 26283392      PMCID: PMC4568239          DOI: 10.1073/pnas.1513216112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  50 in total

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