Literature DB >> 28320876

Taking a Step Back from Back-Translocation: an Integrative View of LepA/EF4's Cellular Function.

Jalyce L E Heller1, Rajashekhar Kamalampeta1, Hans-Joachim Wieden2.   

Abstract

Protein synthesis, the translation of mRNA into a polypeptide facilitated by the ribosome, is assisted by a variety of protein factors, some of which are GTPases. In addition to four highly conserved and well-understood GTPases with known function, there are also a number of noncanonical GTPases that are implicated in translation but whose functions are not fully understood. LepA/EF4 is one of these noncanonical GTPases. It is highly conserved and present in bacteria, mitochondria, and chloroplasts, but its functional role in the cell remains unknown. LepA's sequence and domain arrangement are very similar to those of other translational GTPases, but it contains a unique C-terminal domain (CTD) that is likely essential to its specific function in the cell. Three main hypotheses about the function of LepA have been brought forward to date: (i) LepA is a back-translocase, (ii) LepA relieves ribosome stalling or facilitates sequestration, and (iii) LepA is involved in ribosome biogenesis. This review examines the structural and biochemical information available on bacterial LepA and discusses it on the background of the available in vivo information from higher organisms in order to broaden the view regarding LepA's functional role in the cell and how the structure of its unique CTD might be involved in facilitating this role.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  LepA/EF4; back-translocation; ribosome biogenesis; ribosome stalling; ribosomes; translational GTPase

Mesh:

Substances:

Year:  2017        PMID: 28320876      PMCID: PMC5452718          DOI: 10.1128/MCB.00653-16

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  47 in total

1.  Stimulation of the GTPase activity of translation elongation factor G by ribosomal protein L7/12.

Authors:  A Savelsbergh; D Mohr; B Wilden; W Wintermeyer; M V Rodnina
Journal:  J Biol Chem       Date:  2000-01-14       Impact factor: 5.157

2.  Efficient assembly of ribosomes is inhibited by deletion of bipA in Escherichia coli.

Authors:  Promisree Choudhury; Ann M Flower
Journal:  J Bacteriol       Date:  2015-03-16       Impact factor: 3.490

3.  Conserved GTPase LepA (Elongation Factor 4) functions in biogenesis of the 30S subunit of the 70S ribosome.

Authors:  Michelle R Gibbs; Kyung-Mee Moon; Menglin Chen; Rohan Balakrishnan; Leonard J Foster; Kurt Fredrick
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

Review 4.  The bacterial translation stress response.

Authors:  Agata L Starosta; Jürgen Lassak; Kirsten Jung; Daniel N Wilson
Journal:  FEMS Microbiol Rev       Date:  2014-09-26       Impact factor: 16.408

5.  The conserved GTPase LepA contributes mainly to translation initiation in Escherichia coli.

Authors:  Rohan Balakrishnan; Kenji Oman; Shinichiro Shoji; Ralf Bundschuh; Kurt Fredrick
Journal:  Nucleic Acids Res       Date:  2014-11-06       Impact factor: 16.971

6.  Structure of BipA in GTP form bound to the ratcheted ribosome.

Authors:  Veerendra Kumar; Yun Chen; Rya Ero; Tofayel Ahmed; Jackie Tan; Zhe Li; Andrew See Weng Wong; Shashi Bhushan; Yong-Gui Gao
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-17       Impact factor: 11.205

7.  Elongation factor 4 remodels the A-site tRNA on the ribosome.

Authors:  Matthieu G Gagnon; Jinzhong Lin; Thomas A Steitz
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-18       Impact factor: 11.205

8.  GTP-binding membrane protein of Escherichia coli with sequence homology to initiation factor 2 and elongation factors Tu and G.

Authors:  P E March; M Inouye
Journal:  Proc Natl Acad Sci U S A       Date:  1985-11       Impact factor: 11.205

9.  Phylogenetic distribution of translational GTPases in bacteria.

Authors:  Tõnu Margus; Maido Remm; Tanel Tenson
Journal:  BMC Genomics       Date:  2007-01-10       Impact factor: 3.969

10.  EF4 knockout E. coli cells exhibit lower levels of cellular biosynthesis under acidic stress.

Authors:  Fang Yang; Zhikai Li; Jia Hao; Yan Qin
Journal:  Protein Cell       Date:  2014-07       Impact factor: 14.870

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Authors:  Skye R S Fishbein; Francesca G Tomasi; Ian D Wolf; Charles L Dulberger; Albert Wang; Hasmik Keshishian; Luke Wallace; Steven A Carr; Thomas R Ioerger; E Hesper Rego; Eric J Rubin
Journal:  J Bacteriol       Date:  2020-12-23       Impact factor: 3.490

2.  Metabolite Profiling of Malaysian Gracilaria edulis Reveals Eplerenone as Novel Antibacterial Compound for Drug Repurposing Against MDR Bacteria.

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Journal:  Front Microbiol       Date:  2021-06-30       Impact factor: 5.640

3.  The First Proteomics Study of Nostoc sp. PCC 7120 Exposed to Cyanotoxin BMAA under Nitrogen Starvation.

Authors:  Olga A Koksharova; Ivan O Butenko; Olga V Pobeguts; Nina A Safronova; Vadim M Govorun
Journal:  Toxins (Basel)       Date:  2020-05-09       Impact factor: 4.546

  3 in total

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