Literature DB >> 25484203

Membrane proteins, detergents and crystals: what is the state of the art?

Patrick J Loll1.   

Abstract

At the time when the first membrane-protein crystal structure was determined, crystallization of these molecules was widely perceived as extremely arduous. Today, that perception has changed drastically, and the process is regarded as routine (or nearly so). On the occasion of the International Year of Crystallography 2014, this review presents a snapshot of the current state of the art, with an emphasis on the role of detergents in this process. A survey of membrane-protein crystal structures published since 2012 reveals that the direct crystallization of protein-detergent complexes remains the dominant methodology; in addition, lipidic mesophases have proven immensely useful, particularly in specific niches, and bicelles, while perhaps undervalued, have provided important contributions as well. Evolving trends include the addition of lipids to protein-detergent complexes and the gradual incorporation of new detergents into the standard repertoire. Stability has emerged as a critical parameter controlling how a membrane protein behaves in the presence of detergent, and efforts to enhance stability are discussed. Finally, although discovery-based screening approaches continue to dwarf mechanistic efforts to unravel crystallization, recent technical advances offer hope that future experiments might incorporate the rational manipulation of crystallization behaviors.

Entities:  

Keywords:  crystallization; detergents; membrane proteins

Mesh:

Substances:

Year:  2014        PMID: 25484203      PMCID: PMC4259217          DOI: 10.1107/S2053230X14025035

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  90 in total

Review 1.  A crystal clear solution for determining G-protein-coupled receptor structures.

Authors:  Christopher G Tate
Journal:  Trends Biochem Sci       Date:  2012-07-10       Impact factor: 13.807

2.  Toward rational design of protein detergent complexes: determinants of mixed micelles that are critical for the in vitro stabilization of a G-protein coupled receptor.

Authors:  Michelle A O'Malley; Matthew E Helgeson; Norman J Wagner; Anne S Robinson
Journal:  Biophys J       Date:  2011-10-19       Impact factor: 4.033

3.  Fluorinated and hemifluorinated surfactants derived from maltose: synthesis and application to handling membrane proteins in aqueous solution.

Authors:  Ange Polidori; Marc Presset; Florence Lebaupain; Bruno Ameduri; Jean-Luc Popot; Cécile Breyton; Bernard Pucci
Journal:  Bioorg Med Chem Lett       Date:  2006-09-08       Impact factor: 2.823

4.  Role of detergents in conformational exchange of a G protein-coupled receptor.

Authors:  Ka Young Chung; Tae Hun Kim; Aashish Manglik; Rohan Alvares; Brian K Kobilka; R Scott Prosser
Journal:  J Biol Chem       Date:  2012-08-14       Impact factor: 5.157

Review 5.  Antibody fragments as tools in crystallography.

Authors:  L Griffin; A Lawson
Journal:  Clin Exp Immunol       Date:  2011-06-07       Impact factor: 4.330

6.  Influence of hydrophobic micelle structure on crystallization of the photosynthetic RC-LH1-PufX complex from Rhodobacter blasticus.

Authors:  Laurie-Anne Barret; Cherone Barrot-Ivolot; Simon Raynal; Colette Jungas; Ange Polidori; Françoise Bonneté
Journal:  J Phys Chem B       Date:  2013-07-10       Impact factor: 2.991

7.  High-resolution structure of a membrane protein transferred from amphipol to a lipidic mesophase.

Authors:  V Polovinkin; I Gushchin; M Sintsov; E Round; T Balandin; P Chervakov; V Shevchenko; P Utrobin; A Popov; V Borshchevskiy; A Mishin; A Kuklin; D Willbold; V Chupin; J-L Popot; V Gordeliy
Journal:  J Membr Biol       Date:  2014-09-06       Impact factor: 1.843

Review 8.  The role of protein dynamics in GPCR function: insights from the β2AR and rhodopsin.

Authors:  Aashish Manglik; Brian Kobilka
Journal:  Curr Opin Cell Biol       Date:  2014-02-17       Impact factor: 8.382

9.  Thermostabilisation of the serotonin transporter in a cocaine-bound conformation.

Authors:  Saba Abdul-Hussein; Juni Andréll; Christopher G Tate
Journal:  J Mol Biol       Date:  2013-06-26       Impact factor: 5.469

10.  Applications of the second virial coefficient: protein crystallization and solubility.

Authors:  William W Wilson; Lawrence J Delucas
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-04-30       Impact factor: 1.056

View more
  27 in total

Review 1.  How to resolve microsecond current fluctuations in single ion channels: the power of beta distributions.

Authors:  Indra Schroeder
Journal:  Channels (Austin)       Date:  2015       Impact factor: 2.581

2.  Single-particle electron microscopy in the study of membrane protein structure.

Authors:  Rita De Zorzi; Wei Mi; Maofu Liao; Thomas Walz
Journal:  Microscopy (Oxf)       Date:  2015-10-15       Impact factor: 1.571

3.  Large-volume protein crystal growth for neutron macromolecular crystallography.

Authors:  Joseph D Ng; James K Baird; Leighton Coates; Juan M Garcia-Ruiz; Teresa A Hodge; Sijay Huang
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-03-30       Impact factor: 1.056

4.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

Authors:  Giray Enkavi; Matti Javanainen; Waldemar Kulig; Tomasz Róg; Ilpo Vattulainen
Journal:  Chem Rev       Date:  2019-03-12       Impact factor: 60.622

5.  A rapid expression and purification condition screening protocol for membrane protein structural biology.

Authors:  Dan Sjöstrand; Riccardo Diamanti; Camilla A K Lundgren; Benjamin Wiseman; Martin Högbom
Journal:  Protein Sci       Date:  2017-05-31       Impact factor: 6.725

6.  Maltose neopentyl glycol-3 (MNG-3) analogues for membrane protein study.

Authors:  Kyung Ho Cho; Mohd Husri; Anowarul Amin; Kamil Gotfryd; Ho Jin Lee; Juyeon Go; Jin Woong Kim; Claus J Loland; Lan Guan; Bernadette Byrne; Pil Seok Chae
Journal:  Analyst       Date:  2015-03-27       Impact factor: 4.616

Review 7.  Current strategies for protein production and purification enabling membrane protein structural biology.

Authors:  Aditya Pandey; Kyungsoo Shin; Robin E Patterson; Xiang-Qin Liu; Jan K Rainey
Journal:  Biochem Cell Biol       Date:  2016-01-20       Impact factor: 3.626

Review 8.  Applications of NMR to membrane proteins.

Authors:  Stanley J Opella; Francesca M Marassi
Journal:  Arch Biochem Biophys       Date:  2017-05-18       Impact factor: 4.013

9.  Engineering Salt Bridge Networks between Transmembrane Helices Confers Thermostability in G-Protein-Coupled Receptors.

Authors:  Soumadwip Ghosh; Tobias Bierig; Sangbae Lee; Suvamay Jana; Adelheid Löhle; Gisela Schnapp; Christofer S Tautermann; Nagarajan Vaidehi
Journal:  J Chem Theory Comput       Date:  2018-11-06       Impact factor: 6.006

10.  Large-scale identification of membrane proteins with properties favorable for crystallization.

Authors:  Jared Kim; Allison Kagawa; Kellie Kurasaki; Niloufar Ataie; Il Kyu Cho; Qing X Li; Ho Leung Ng
Journal:  Protein Sci       Date:  2015-08-27       Impact factor: 6.725

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.