Literature DB >> 24914163

Liquid sample delivery techniques for serial femtosecond crystallography.

Uwe Weierstall1.   

Abstract

X-ray free-electron lasers overcome the problem of radiation damage in protein crystallography and allow structure determination from micro- and nanocrystals at room temperature. To ensure that consecutive X-ray pulses do not probe previously exposed crystals, the sample needs to be replaced with the X-ray repetition rate, which ranges from 120 Hz at warm linac-based free-electron lasers to 1 MHz at superconducting linacs. Liquid injectors are therefore an essential part of a serial femtosecond crystallography experiment at an X-ray free-electron laser. Here, we compare different techniques of injecting microcrystals in solution into the pulsed X-ray beam in vacuum. Sample waste due to mismatch of the liquid flow rate to the X-ray repetition rate can be addressed through various techniques.
© 2014 The Author(s) Published by the Royal Society. All rights reserved.

Entities:  

Keywords:  X-ray free-electron laser; crystallography; liquid jets; serial femtosecond

Mesh:

Year:  2014        PMID: 24914163      PMCID: PMC4052872          DOI: 10.1098/rstb.2013.0337

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  20 in total

1.  Potential for biomolecular imaging with femtosecond X-ray pulses.

Authors:  R Neutze; R Wouts; D van der Spoel; E Weckert; J Hajdu
Journal:  Nature       Date:  2000-08-17       Impact factor: 49.962

2.  Towards ETEM serial crystallography: Electron diffraction from liquid jets.

Authors:  D P Deponte; J T McKeown; U Weierstall; R B Doak; J C H Spence
Journal:  Ultramicroscopy       Date:  2010-12-01       Impact factor: 2.689

3.  De novo protein crystal structure determination from X-ray free-electron laser data.

Authors:  Thomas R M Barends; Lutz Foucar; Sabine Botha; R Bruce Doak; Robert L Shoeman; Karol Nass; Jason E Koglin; Garth J Williams; Sébastien Boutet; Marc Messerschmidt; Ilme Schlichting
Journal:  Nature       Date:  2013-11-24       Impact factor: 49.962

4.  Nanoflow electrospinning serial femtosecond crystallography.

Authors:  Raymond G Sierra; Hartawan Laksmono; Jan Kern; Rosalie Tran; Johan Hattne; Roberto Alonso-Mori; Benedikt Lassalle-Kaiser; Carina Glöckner; Julia Hellmich; Donald W Schafer; Nathaniel Echols; Richard J Gildea; Ralf W Grosse-Kunstleve; Jonas Sellberg; Trevor A McQueen; Alan R Fry; Marc M Messerschmidt; Alan Miahnahri; M Marvin Seibert; Christina Y Hampton; Dmitri Starodub; N Duane Loh; Dimosthenis Sokaras; Tsu-Chien Weng; Petrus H Zwart; Pieter Glatzel; Despina Milathianaki; William E White; Paul D Adams; Garth J Williams; Sébastien Boutet; Athina Zouni; Johannes Messinger; Nicholas K Sauter; Uwe Bergmann; Junko Yano; Vittal K Yachandra; Michael J Bogan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-10-18

5.  Anomalous signal from S atoms in protein crystallographic data from an X-ray free-electron laser.

Authors:  Thomas R M Barends; Lutz Foucar; Robert L Shoeman; Sadia Bari; Sascha W Epp; Robert Hartmann; Gunter Hauser; Martin Huth; Christian Kieser; Lukas Lomb; Koji Motomura; Kiyonobu Nagaya; Carlo Schmidt; Rafael Strecker; Denis Anielski; Rebecca Boll; Benjamin Erk; Hironobu Fukuzawa; Elisabeth Hartmann; Takaki Hatsui; Peter Holl; Yuichi Inubushi; Tetsuya Ishikawa; Stephan Kassemeyer; Christian Kaiser; Frank Koeck; Naoki Kunishima; Moritz Kurka; Daniel Rolles; Benedikt Rudek; Artem Rudenko; Takahiro Sato; Claus Dieter Schroeter; Heike Soltau; Lothar Strueder; Tomoyuki Tanaka; Tadashi Togashi; Kensuke Tono; Joachim Ullrich; Satoshi Yase; Shin Ichi Wada; Makoto Yao; Makina Yabashi; Kiyoshi Ueda; Ilme Schlichting
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-04-11

6.  Femtosecond protein nanocrystallography-data analysis methods.

Authors:  Richard A Kirian; Xiaoyu Wang; Uwe Weierstall; Kevin E Schmidt; John C H Spence; Mark Hunter; Petra Fromme; Thomas White; Henry N Chapman; James Holton
Journal:  Opt Express       Date:  2010-03-15       Impact factor: 3.894

7.  Serial femtosecond crystallography of G protein-coupled receptors.

Authors:  Wei Liu; Daniel Wacker; Cornelius Gati; Gye Won Han; Daniel James; Dingjie Wang; Garrett Nelson; Uwe Weierstall; Vsevolod Katritch; Anton Barty; Nadia A Zatsepin; Dianfan Li; Marc Messerschmidt; Sébastien Boutet; Garth J Williams; Jason E Koglin; M Marvin Seibert; Chong Wang; Syed T A Shah; Shibom Basu; Raimund Fromme; Christopher Kupitz; Kimberley N Rendek; Ingo Grotjohann; Petra Fromme; Richard A Kirian; Kenneth R Beyerlein; Thomas A White; Henry N Chapman; Martin Caffrey; John C H Spence; Raymond C Stevens; Vadim Cherezov
Journal:  Science       Date:  2013-12-20       Impact factor: 47.728

8.  Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature.

Authors:  Jan Kern; Roberto Alonso-Mori; Rosalie Tran; Johan Hattne; Richard J Gildea; Nathaniel Echols; Carina Glöckner; Julia Hellmich; Hartawan Laksmono; Raymond G Sierra; Benedikt Lassalle-Kaiser; Sergey Koroidov; Alyssa Lampe; Guangye Han; Sheraz Gul; Dörte Difiore; Despina Milathianaki; Alan R Fry; Alan Miahnahri; Donald W Schafer; Marc Messerschmidt; M Marvin Seibert; Jason E Koglin; Dimosthenis Sokaras; Tsu-Chien Weng; Jonas Sellberg; Matthew J Latimer; Ralf W Grosse-Kunstleve; Petrus H Zwart; William E White; Pieter Glatzel; Paul D Adams; Michael J Bogan; Garth J Williams; Sébastien Boutet; Johannes Messinger; Athina Zouni; Nicholas K Sauter; Vittal K Yachandra; Uwe Bergmann; Junko Yano
Journal:  Science       Date:  2013-02-14       Impact factor: 47.728

9.  Crystallizing membrane proteins using lipidic mesophases.

Authors:  Martin Caffrey; Vadim Cherezov
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

10.  Time-resolved protein nanocrystallography using an X-ray free-electron laser.

Authors:  Andrew Aquila; Mark S Hunter; R Bruce Doak; Richard A Kirian; Petra Fromme; Thomas A White; Jakob Andreasson; David Arnlund; Saša Bajt; Thomas R M Barends; Miriam Barthelmess; Michael J Bogan; Christoph Bostedt; Hervé Bottin; John D Bozek; Carl Caleman; Nicola Coppola; Jan Davidsson; Daniel P DePonte; Veit Elser; Sascha W Epp; Benjamin Erk; Holger Fleckenstein; Lutz Foucar; Matthias Frank; Raimund Fromme; Heinz Graafsma; Ingo Grotjohann; Lars Gumprecht; Janos Hajdu; Christina Y Hampton; Andreas Hartmann; Robert Hartmann; Stefan Hau-Riege; Günter Hauser; Helmut Hirsemann; Peter Holl; James M Holton; André Hömke; Linda Johansson; Nils Kimmel; Stephan Kassemeyer; Faton Krasniqi; Kai-Uwe Kühnel; Mengning Liang; Lukas Lomb; Erik Malmerberg; Stefano Marchesini; Andrew V Martin; Filipe R N C Maia; Marc Messerschmidt; Karol Nass; Christian Reich; Richard Neutze; Daniel Rolles; Benedikt Rudek; Artem Rudenko; Ilme Schlichting; Carlo Schmidt; Kevin E Schmidt; Joachim Schulz; M Marvin Seibert; Robert L Shoeman; Raymond Sierra; Heike Soltau; Dmitri Starodub; Francesco Stellato; Stephan Stern; Lothar Strüder; Nicusor Timneanu; Joachim Ullrich; Xiaoyu Wang; Garth J Williams; Georg Weidenspointner; Uwe Weierstall; Cornelia Wunderer; Anton Barty; John C H Spence; Henry N Chapman
Journal:  Opt Express       Date:  2012-01-30       Impact factor: 3.894

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  42 in total

Review 1.  A Bright Future for Serial Femtosecond Crystallography with XFELs.

Authors:  Linda C Johansson; Benjamin Stauch; Andrii Ishchenko; Vadim Cherezov
Journal:  Trends Biochem Sci       Date:  2017-07-18       Impact factor: 13.807

2.  X-ray transparent microfluidic chips for high-throughput screening and optimization of in meso membrane protein crystallization.

Authors:  Jeremy M Schieferstein; Ashtamurthy S Pawate; Chang Sun; Frank Wan; Paige N Sheraden; Jana Broecker; Oliver P Ernst; Robert B Gennis; Paul J A Kenis
Journal:  Biomicrofluidics       Date:  2017-04-24       Impact factor: 2.800

3.  The birth of a new field.

Authors:  John C H Spence; Henry N Chapman
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-07-17       Impact factor: 6.237

4.  Three-dimensional-printed gas dynamic virtual nozzles for x-ray laser sample delivery.

Authors:  Garrett Nelson; Richard A Kirian; Uwe Weierstall; Nadia A Zatsepin; Tomáš Faragó; Tilo Baumbach; Fabian Wilde; Fabian B P Niesler; Benjamin Zimmer; Izumi Ishigami; Masahide Hikita; Saša Bajt; Syun-Ru Yeh; Denis L Rousseau; Henry N Chapman; John C H Spence; Michael Heymann
Journal:  Opt Express       Date:  2016-05-30       Impact factor: 3.894

5.  3D printing of gas-dynamic virtual nozzles and optical characterization of high-speed microjets.

Authors:  Reza Nazari; Sahba Zaare; Roberto C Alvarez; Konstantinos Karpos; Trent Engelman; Caleb Madsen; Garrett Nelson; John C H Spence; Uwe Weierstall; Ronald J Adrian; Richard A Kirian
Journal:  Opt Express       Date:  2020-07-20       Impact factor: 3.894

6.  Transcription with a laser: Radiation-damage-free diffraction of RNA Polymerase II crystals.

Authors:  Guowu Lin; Simon C Weiss; Sandra Vergara; Carlos Camacho; Guillermo Calero
Journal:  Methods       Date:  2019-04-25       Impact factor: 3.608

7.  3D printed droplet generation devices for serial femtosecond crystallography enabled by surface coating.

Authors:  Austin Echelmeier; Daihyun Kim; Jorvani Cruz Villarreal; Jesse Coe; Sebastian Quintana; Gerrit Brehm; Ana Egatz-Gomez; Reza Nazari; Raymond G Sierra; Jason E Koglin; Alexander Batyuk; Mark S Hunter; Sébastien Boutet; Nadia Zatsepin; Richard A Kirian; Thomas D Grant; Petra Fromme; Alexandra Ros
Journal:  J Appl Crystallogr       Date:  2019-08-29       Impact factor: 3.304

8.  Serial femtosecond crystallography opens new avenues for Structural Biology.

Authors:  Jesse Coe; Petra Fromme
Journal:  Protein Pept Lett       Date:  2016       Impact factor: 1.890

Review 9.  Serial Femtosecond Crystallography of G Protein-Coupled Receptors.

Authors:  Benjamin Stauch; Vadim Cherezov
Journal:  Annu Rev Biophys       Date:  2018-03-15       Impact factor: 12.981

10.  Acoustic Injectors for Drop-On-Demand Serial Femtosecond Crystallography.

Authors:  Christian G Roessler; Rakhi Agarwal; Marc Allaire; Roberto Alonso-Mori; Babak Andi; José F R Bachega; Martin Bommer; Aaron S Brewster; Michael C Browne; Ruchira Chatterjee; Eunsun Cho; Aina E Cohen; Matthew Cowan; Sammy Datwani; Victor L Davidson; Jim Defever; Brent Eaton; Richard Ellson; Yiping Feng; Lucien P Ghislain; James M Glownia; Guangye Han; Johan Hattne; Julia Hellmich; Annie Héroux; Mohamed Ibrahim; Jan Kern; Anthony Kuczewski; Henrik T Lemke; Pinghua Liu; Lars Majlof; William M McClintock; Stuart Myers; Silke Nelsen; Joe Olechno; Allen M Orville; Nicholas K Sauter; Alexei S Soares; S Michael Soltis; Heng Song; Richard G Stearns; Rosalie Tran; Yingssu Tsai; Monarin Uervirojnangkoorn; Carrie M Wilmot; Vittal Yachandra; Junko Yano; Erik T Yukl; Diling Zhu; Athina Zouni
Journal:  Structure       Date:  2016-03-17       Impact factor: 5.006

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