Literature DB >> 23413188

Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature.

Jan Kern1, Roberto Alonso-Mori, Rosalie Tran, Johan Hattne, Richard J Gildea, Nathaniel Echols, Carina Glöckner, Julia Hellmich, Hartawan Laksmono, Raymond G Sierra, Benedikt Lassalle-Kaiser, Sergey Koroidov, Alyssa Lampe, Guangye Han, Sheraz Gul, Dörte Difiore, Despina Milathianaki, Alan R Fry, Alan Miahnahri, Donald W Schafer, Marc Messerschmidt, M Marvin Seibert, Jason E Koglin, Dimosthenis Sokaras, Tsu-Chien Weng, Jonas Sellberg, Matthew J Latimer, Ralf W Grosse-Kunstleve, Petrus H Zwart, William E White, Pieter Glatzel, Paul D Adams, Michael J Bogan, Garth J Williams, Sébastien Boutet, Johannes Messinger, Athina Zouni, Nicholas K Sauter, Vittal K Yachandra, Uwe Bergmann, Junko Yano.   

Abstract

Intense femtosecond x-ray pulses produced at the Linac Coherent Light Source (LCLS) were used for simultaneous x-ray diffraction (XRD) and x-ray emission spectroscopy (XES) of microcrystals of photosystem II (PS II) at room temperature. This method probes the overall protein structure and the electronic structure of the Mn4CaO5 cluster in the oxygen-evolving complex of PS II. XRD data are presented from both the dark state (S1) and the first illuminated state (S2) of PS II. Our simultaneous XRD-XES study shows that the PS II crystals are intact during our measurements at the LCLS, not only with respect to the structure of PS II, but also with regard to the electronic structure of the highly radiation-sensitive Mn4CaO5 cluster, opening new directions for future dynamics studies.

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Year:  2013        PMID: 23413188      PMCID: PMC3732582          DOI: 10.1126/science.1234273

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  33 in total

1.  X-ray diffraction from membrane protein nanocrystals.

Authors:  M S Hunter; D P DePonte; D A Shapiro; R A Kirian; X Wang; D Starodub; S Marchesini; U Weierstall; R B Doak; J C H Spence; P Fromme
Journal:  Biophys J       Date:  2011-01-05       Impact factor: 4.033

2.  Where water is oxidized to dioxygen: structure of the photosynthetic Mn4Ca cluster.

Authors:  Junko Yano; Jan Kern; Kenneth Sauer; Matthew J Latimer; Yulia Pushkar; Jacek Biesiadka; Bernhard Loll; Wolfram Saenger; Johannes Messinger; Athina Zouni; Vittal K Yachandra
Journal:  Science       Date:  2006-11-03       Impact factor: 47.728

3.  Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å.

Authors:  Yasufumi Umena; Keisuke Kawakami; Jian-Ren Shen; Nobuo Kamiya
Journal:  Nature       Date:  2011-04-17       Impact factor: 49.962

4.  Photoreduction of the active site of the metalloprotein putidaredoxin by synchrotron radiation.

Authors:  Mary C Corbett; Matthew J Latimer; Thomas L Poulos; Irina F Sevrioukova; Keith O Hodgson; Britt Hedman
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-08-17

5.  Foundations of residual-density analysis.

Authors:  Kathrin Meindl; Julian Henn
Journal:  Acta Crystallogr A       Date:  2008-04-18       Impact factor: 2.290

6.  Nanoflow electrospinning serial femtosecond crystallography.

Authors:  Raymond G Sierra; Hartawan Laksmono; Jan Kern; Rosalie Tran; Johan Hattne; Roberto Alonso-Mori; Benedikt Lassalle-Kaiser; Carina Glöckner; Julia Hellmich; Donald W Schafer; Nathaniel Echols; Richard J Gildea; Ralf W Grosse-Kunstleve; Jonas Sellberg; Trevor A McQueen; Alan R Fry; Marc M Messerschmidt; Alan Miahnahri; M Marvin Seibert; Christina Y Hampton; Dmitri Starodub; N Duane Loh; Dimosthenis Sokaras; Tsu-Chien Weng; Petrus H Zwart; Pieter Glatzel; Despina Milathianaki; William E White; Paul D Adams; Garth J Williams; Sébastien Boutet; Athina Zouni; Johannes Messinger; Nicholas K Sauter; Uwe Bergmann; Junko Yano; Vittal K Yachandra; Michael J Bogan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-10-18

7.  Crystallographic and single-crystal spectral analysis of the peroxidase ferryl intermediate.

Authors:  Yergalem T Meharenna; Tzanko Doukov; Huiying Li; S Michael Soltis; Thomas L Poulos
Journal:  Biochemistry       Date:  2010-04-13       Impact factor: 3.162

8.  Absence of Mn-centered oxidation in the S(2) --> S(3) transition: implications for the mechanism of photosynthetic water oxidation.

Authors:  J Messinger; J H Robblee; U Bergmann; C Fernandez; P Glatzel; H Visser; R M Cinco; K L McFarlane; E Bellacchio; S A Pizarro; S P Cramer; K Sauer; M P Klein; V K Yachandra
Journal:  J Am Chem Soc       Date:  2001-08-15       Impact factor: 15.419

9.  Direct detection of oxygen ligation to the Mn(4)Ca cluster of photosystem II by X-ray emission spectroscopy.

Authors:  Yulia Pushkar; Xi Long; Pieter Glatzel; Gary W Brudvig; G Charles Dismukes; Terrence J Collins; Vittal K Yachandra; Junko Yano; Uwe Bergmann
Journal:  Angew Chem Int Ed Engl       Date:  2010       Impact factor: 15.336

10.  Cyanobacterial photosystem II at 2.9-A resolution and the role of quinones, lipids, channels and chloride.

Authors:  Albert Guskov; Jan Kern; Azat Gabdulkhakov; Matthias Broser; Athina Zouni; Wolfram Saenger
Journal:  Nat Struct Mol Biol       Date:  2009-02-15       Impact factor: 15.369

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  136 in total

1.  Entangled quantum electronic wavefunctions of the Mn₄CaO₅ cluster in photosystem II.

Authors:  Yuki Kurashige; Garnet Kin-Lic Chan; Takeshi Yanai
Journal:  Nat Chem       Date:  2013-06-09       Impact factor: 24.427

2.  De novo protein crystal structure determination from X-ray free-electron laser data.

Authors:  Thomas R M Barends; Lutz Foucar; Sabine Botha; R Bruce Doak; Robert L Shoeman; Karol Nass; Jason E Koglin; Garth J Williams; Sébastien Boutet; Marc Messerschmidt; Ilme Schlichting
Journal:  Nature       Date:  2013-11-24       Impact factor: 49.962

3.  Watching energy transfer in metalloporphyrin heterodimers using stimulated X-ray Raman spectroscopy.

Authors:  Jason D Biggs; Yu Zhang; Daniel Healion; Shaul Mukamel
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-09       Impact factor: 11.205

4.  Tetranuclear [MnIIIMn3IVO4] Complexes as Spectroscopic Models of the S2 State of the Oxygen Evolving Complex in Photosystem II.

Authors:  Heui Beom Lee; Angela A Shiau; Paul H Oyala; David A Marchiori; Sheraz Gul; Ruchira Chatterjee; Junko Yano; R David Britt; Theodor Agapie
Journal:  J Am Chem Soc       Date:  2018-11-30       Impact factor: 15.419

5.  In situ serial Laue diffraction on a microfluidic crystallization device.

Authors:  Sarah L Perry; Sudipto Guha; Ashtamurthy S Pawate; Robert Henning; Irina Kosheleva; Vukica Srajer; Paul J A Kenis; Zhong Ren
Journal:  J Appl Crystallogr       Date:  2014-11-18       Impact factor: 3.304

6.  Structural biology: Photosynthetic complex in close-up.

Authors:  Ilme Schlichting
Journal:  Nature       Date:  2014-11-26       Impact factor: 49.962

7.  Grease matrix as a versatile carrier of proteins for serial crystallography.

Authors:  Michihiro Sugahara; Eiichi Mizohata; Eriko Nango; Mamoru Suzuki; Tomoyuki Tanaka; Tetsuya Masuda; Rie Tanaka; Tatsuro Shimamura; Yoshiki Tanaka; Chiyo Suno; Kentaro Ihara; Dongqing Pan; Keisuke Kakinouchi; Shigeru Sugiyama; Michio Murata; Tsuyoshi Inoue; Kensuke Tono; Changyong Song; Jaehyun Park; Takashi Kameshima; Takaki Hatsui; Yasumasa Joti; Makina Yabashi; So Iwata
Journal:  Nat Methods       Date:  2014-11-10       Impact factor: 28.547

8.  Towards time-resolved serial crystallography in a microfluidic device.

Authors:  Ashtamurthy S Pawate; Vukica Šrajer; Jeremy Schieferstein; Sudipto Guha; Robert Henning; Irina Kosheleva; Marius Schmidt; Zhong Ren; Paul J A Kenis; Sarah L Perry
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-06-27       Impact factor: 1.056

9.  X-ray Emission Spectroscopy as an in Situ Diagnostic Tool for X-ray Crystallography of Metalloproteins Using an X-ray Free-Electron Laser.

Authors:  Thomas Fransson; Ruchira Chatterjee; Franklin D Fuller; Sheraz Gul; Clemens Weninger; Dimosthenis Sokaras; Thomas Kroll; Roberto Alonso-Mori; Uwe Bergmann; Jan Kern; Vittal K Yachandra; Junko Yano
Journal:  Biochemistry       Date:  2018-06-28       Impact factor: 3.162

10.  L-Edge X-ray Absorption Spectroscopy of Dilute Systems Relevant to Metalloproteins Using an X-ray Free-Electron Laser.

Authors:  Rolf Mitzner; Jens Rehanek; Jan Kern; Sheraz Gul; Johan Hattne; Taketo Taguchi; Roberto Alonso-Mori; Rosalie Tran; Christian Weniger; Henning Schröder; Wilson Quevedo; Hartawan Laksmono; Raymond G Sierra; Guangye Han; Benedikt Lassalle-Kaiser; Sergey Koroidov; Katharina Kubicek; Simon Schreck; Kristjan Kunnus; Maria Brzhezinskaya; Alexander Firsov; Michael P Minitti; Joshua J Turner; Stefan Moeller; Nicholas K Sauter; Michael J Bogan; Dennis Nordlund; William F Schlotter; Johannes Messinger; Andrew Borovik; Simone Techert; Frank M F de Groot; Alexander Föhlisch; Alexei Erko; Uwe Bergmann; Vittal K Yachandra; Philippe Wernet; Junko Yano
Journal:  J Phys Chem Lett       Date:  2013-10-09       Impact factor: 6.475

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