| Literature DB >> 24369495 |
Kleyton Arlindo Barella1, Vital Paulino Costa1, Vanessa Gonçalves Vidotti1, Fabrício Reis Silva1, Marcelo Dias2, Edson Satoshi Gomi2.
Abstract
Purpose. To investigate the diagnostic accuracy of machine learning classifiers (MLCs) using retinal nerve fiber layer (RNFL) and optic nerve (ON) parameters obtained with spectral domain optical coherence tomography (SD-OCT). Methods. Fifty-seven patients with early to moderate primary open angle glaucoma and 46 healthy patients were recruited. All 103 patients underwent a complete ophthalmological examination, achromatic standard automated perimetry, and imaging with SD-OCT. Receiver operating characteristic (ROC) curves were built for RNFL and ON parameters. Ten MLCs were tested. Areas under ROC curves (aROCs) obtained for each SD-OCT parameter and MLC were compared. Results. The mean age was 56.5 ± 8.9 years for healthy individuals and 59.9 ± 9.0 years for glaucoma patients (P = 0.054). Mean deviation values were -1.4 dB for healthy individuals and -4.0 dB for glaucoma patients (P < 0.001). SD-OCT parameters with the greatest aROCs were cup/disc area ratio (0.846) and average cup/disc (0.843). aROCs obtained with classifiers varied from 0.687 (CTREE) to 0.877 (RAN). The aROC obtained with RAN (0.877) was not significantly different from the aROC obtained with the best single SD-OCT parameter (0.846) (P = 0.542). Conclusion. MLCs showed good accuracy but did not improve the sensitivity and specificity of SD-OCT for the diagnosis of glaucoma.Entities:
Year: 2013 PMID: 24369495 PMCID: PMC3863536 DOI: 10.1155/2013/789129
Source DB: PubMed Journal: J Ophthalmol ISSN: 2090-004X Impact factor: 1.909
Demographic characteristics of the healthy and glaucoma groups.
| Healthy ( | Glaucoma ( |
| |
|---|---|---|---|
| Age (years; mean ± SD) | 56.5 ± 8.9 | 59.9 ± 9.0 | 0.054 |
| Gender (male [%] : female [%]) | 23 [50.0] : 23 [50.0] | 28 [49.2] : 29 [50.8] | 0.930 |
| Race (Caucasian [%] : African-American [%]) | 35 [76.0] : 11 [24.0] | 43 [75.4] : 14 [24.6] | 0.539 |
| Visual acuity LogMAR (mean ± SD) | 0.04 ± 0.09 | 0.09 ± 0.10 |
|
| Spherical equivalent (diopters; mean ± SD) | 0.78 ± 1.6 | 0.95 ± 1.4 | 0.586 |
| Intraocular pressure (mmHg; mean ± SD) | 14.7 ± 2.6 | 13.8 ± 2.5 | 0.100 |
| Medications (mean ± SD) | 0 | 2.0 ± 1.1 |
|
| MD (dB; mean ± SD) | −1.4 ± 1.6 | −4.0 ± 2.4 |
|
| PSD (dB; mean ± SD) | 1.8 ± 0.7 | 4.3 ± 2.4 |
|
SD: standard deviation; MD: mean deviation; dB: decibel; PSD: pattern standard deviation.
Mean ± standard deviation of SD-OCT parameters in both groups.
| SD-OCT | Healthy ( | Glaucoma ( |
|
|---|---|---|---|
| Average thickness ( | 93.3 ± 9.9 | 81.4 ± 11.2 |
|
| Quadrant ( | |||
| Temporal | 63.2 ± 11.3 | 57.4 ± 12.5 |
|
| Superior | 117.4 ± 15.1 | 100.4 ± 18.9 |
|
| Nasal | 72.8 ± 10.9 | 66.4 ± 9.8 |
|
| Inferior | 119.9 ± 17.6 | 101.1 ± 17.5 |
|
| Clock hour ( | |||
| 1 | 103.3 ± 19.0 | 90.9 ± 20.8 |
|
| 2 | 90.9 ± 16.2 | 78.7 ± 13.8 |
|
| 3 | 61.4 ± 9.3 | 59.4 ± 9.5 | 0.295 |
| 4 | 66.2 ± 13.7 | 62.1 ± 11.7 | 0.105 |
| 5 | 97.2 ± 18.9 | 88.0 ± 15.6 |
|
| 6 | 132.4 ± 26.4 | 111.1 ± 25.3 |
|
| 7 | 130.2 ± 23.4 | 104.3 ± 27.8 |
|
| 8 | 64.7 ± 13.5 | 58.4 ± 15.7 |
|
| 9 | 50.8 ± 14.5 | 48.1 ± 12.8 | 0.316 |
| 10 | 74.2 ± 13.6 | 65.9 ± 14.4 |
|
| 11 | 123.8 ± 21.9 | 103.2 ± 26.7 |
|
| 12 | 125.0 ± 26.1 | 107.0 ± 25.6 |
|
| Cup/disc area (ratio) | 0.34 ± 0.14 | 0.53 ± 0.13 |
|
| Average cup/disc (ratio) | 0.56 ± 0.13 | 0.71 ± 0.09 |
|
| Vertical cup/disc (ratio) | 0.53 ± 0.13 | 0.68 ± 0.09 |
|
| Rim area (mm2) | 1.28 ± 0.21 | 0.98 ± 0.24 |
|
| Cup volume (mm3) | 0.24 ± 0.24 | 0.50 ± 0.29 |
|
| Disc area (mm2) | 2.01 ± 0.41 | 2.19 ± 0.52 | 0.055 |
SD-OCT: spectral domain optical coherence tomography.
Areas under the ROC curve (aROCs) for each SD-OCT parameter and sensitivities (%) with fixed specificities of 80% and 90%.
| SD-OCT | aROC (CI) | Specificity 80% | Specificity 90% |
|---|---|---|---|
| Average thickness | 0.783 (0.690–0.858) | 62.2 | 51.9 |
| Quadrant | |||
| Temporal | 0.641 (0.540–0.733) | 38.7 | 28.0 |
| Superior | 0.747 (0.652–0.828) | 57.8 | 55.4 |
| Nasal | 0.672 (0.573–0.761) | 41.9 | 23.8 |
| Inferior | 0.775 (0.682–0.851) | 63.1 | 45.6 |
| Clock hour | |||
| 1 | 0.690 (0.591–0.777) | 49.1 | 27.3 |
| 2 | 0.720 (0.623–0.804) | 52.9 | 45.9 |
| 3 | 0.563 (0.462–0.661)* | 23.1 | 18.4 |
| 4 | 0.597 (0.495–0.692)* | 26.4 | 12.2 |
| 5 | 0.642 (0.542–0.734) | 28.0 | 25.6 |
| 6 | 0.711 (0.613–0.796) | 45.6 | 32.6 |
| 7 | 0.764 (0.670–0.842) | 54.7 | 40.7 |
| 8 | 0.638 (0.537–0.730) | 44.2 | 26.6 |
| 9 | 0.564 (0.463–0.662)* | 31.5 | 25.7 |
| 10 | 0.670 (0.570–0.759) | 47.7 | 31.9 |
| 11 | 0.741 (0.646–0.823) | 58.6 | 32.6 |
| 12 | 0.686 (0.587–0.774) | 42.8 | 24.5 |
| Cup/disc area | 0.846 (0.762–0.910) | 67.7 | 60.0 |
| Average cup/disc | 0.843 (0.758–0.907) | 66.6 | 58.2 |
| Vertical cup/disc | 0.832 (0.746–0.899) | 70.8 | 58.9 |
| Rim area | 0.828 (0.741–0.895) | 70.1 | 62.4 |
| Cup volume | 0.786 (0.694–0.860) | 64.9 | 42.1 |
| Disc area | 0.594 (0.493–0.690)* | 33.3 | 19.3 |
SD-OCT: spectral domain optical coherence tomography; CI: confidence interval of 95%.
*Parameters with aROCs not significantly different from chance.
Areas under the receiver operating characteristic curve (aROCs) of best parameter (BP) and all 23 parameters (AP) obtained with machine learning classifiers and sensitivities (%) with fixed specificities of 80% and 90% for AP.
| MLC | aROC-BP (CI) [NP] | aROC-AP (CI) | Specificity 80%-AP | Specificity 90%-AP |
|---|---|---|---|---|
| RAN | 0.877 (0.810–0.944) [13] | 0.805 (0.738–0.872) | 64.9 | 49.1 |
| NB | 0.870 (0.801–0.939) [11] | 0.818 (0.749–0.939) | 68.4 | 52.6 |
| RBF | 0.866 (0.796–0.936) [11] | 0.839 (0.746–0.898) | 71.9 | 63.1 |
| MLP | 0.843 (0.768–0.918) [11] | 0.768 (0.693–0.918) | 49.1 | 47.3 |
| ADA | 0.839 (0.763–0.915) [19] | 0.839 (0.763–0.915) | 73.6 | 52.6 |
| ENS | 0.829 (0.751–0.907) [08] | 0.793 (0.715–0.871) | 61.4 | 56.1 |
| BAG | 0.828 (0.749–0.907) [12] | 0.804 (0.725–0.883) | 57.8 | 50.8 |
| SVMG | 0.825 (0.746–0.904) [10] | 0.753 (0.674–0.832) | 56.0 | 28.0 |
| SVML | 0.780 (0.692–0.868) [02] | 0.690 (0.602–0.778) | 45.0 | 22.5 |
| CTREE | 0.733 (0.684–0.862) [07] | 0.687 (0.638–0.736) | 46.0 | 23.0 |
MLC: machine learning classifier; aROC: area under the ROC curve; BP: best parameter; AP: all parameters; NP: number of parameters; CI: confidence interval of 95%; BAG: bagging; NB: Naive-Bayes; SVML: linear support vector machine; SVMG: Gaussian support vector machine; MLP: multilayer perceptrons; RBF: radial basis function; RAN: random forest; ENS: ensemble selection; CTREE: classification trees; ADA: AdaBoost.
Figure 1Areas under the receiver operating characteristic curve (aROCs) of the best classifier trained with the number of spectral domain optical coherence tomography (SD-OCT) parameters which allowed the best performance (RAN: random forest = 0.877) and aROC of the best SD-OCT parameter (CDA: cup/disc area = 0.846) (P = 0.542).