Literature DB >> 24240429

Detecting the translocation of DNA through a nanopore using graphene nanoribbons.

F Traversi1, C Raillon, S M Benameur, K Liu, S Khlybov, M Tosun, D Krasnozhon, A Kis, A Radenovic.   

Abstract

Solid-state nanopores can act as single-molecule sensors and could potentially be used to rapidly sequence DNA molecules. However, nanopores are typically fabricated in insulating membranes that are as thick as 15 bases, which makes it difficult for the devices to read individual bases. Graphene is only 0.335 nm thick (equivalent to the spacing between two bases in a DNA chain) and could therefore provide a suitable membrane for sequencing applications. Here, we show that a solid-state nanopore can be integrated with a graphene nanoribbon transistor to create a sensor for DNA translocation. As DNA molecules move through the pore, the device can simultaneously measure drops in ionic current and changes in local voltage in the transistor, which can both be used to detect the molecules. We examine the correlation between these two signals and use the ionic current measurements as a real-time control of the graphene-based sensing device.

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Year:  2013        PMID: 24240429     DOI: 10.1038/nnano.2013.240

Source DB:  PubMed          Journal:  Nat Nanotechnol        ISSN: 1748-3387            Impact factor:   39.213


  37 in total

1.  Ion-beam sculpting at nanometre length scales.

Authors:  J Li; D Stein; C McMullan; D Branton; M J Aziz; J A Golovchenko
Journal:  Nature       Date:  2001-07-12       Impact factor: 49.962

2.  Fabrication of solid-state nanopores with single-nanometre precision.

Authors:  A J Storm; J H Chen; X S Ling; H W Zandbergen; C Dekker
Journal:  Nat Mater       Date:  2003-08       Impact factor: 43.841

3.  Rapid electronic detection of probe-specific microRNAs using thin nanopore sensors.

Authors:  Meni Wanunu; Tali Dadosh; Vishva Ray; Jingmin Jin; Larry McReynolds; Marija Drndić
Journal:  Nat Nanotechnol       Date:  2010-10-24       Impact factor: 39.213

4.  Detecting single stranded DNA with a solid state nanopore.

Authors:  Daniel Fologea; Marc Gershow; Bradley Ledden; David S McNabb; Jene A Golovchenko; Jiali Li
Journal:  Nano Lett       Date:  2005-10       Impact factor: 11.189

5.  Translocation of double-strand DNA through a silicon oxide nanopore.

Authors:  A J Storm; J H Chen; H W Zandbergen; C Dekker
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2005-05-06

Review 6.  Solid-state nanopores.

Authors:  Cees Dekker
Journal:  Nat Nanotechnol       Date:  2007-03-04       Impact factor: 39.213

7.  Fast DNA sequencing with a graphene-based nanochannel device.

Authors:  Seung Kyu Min; Woo Youn Kim; Yeonchoo Cho; Kwang S Kim
Journal:  Nat Nanotechnol       Date:  2011-02-06       Impact factor: 39.213

8.  A simple and scalable graphene patterning method and its application in CdSe nanobelt/graphene Schottky junction solar cells.

Authors:  Yu Ye; Lin Gan; Lun Dai; Yu Dai; Xuefeng Guo; Hu Meng; Bin Yu; Zujin Shi; Kuanping Shang; Guogang Qin
Journal:  Nanoscale       Date:  2011-03-01       Impact factor: 7.790

9.  Solution-gated epitaxial graphene as pH sensor.

Authors:  Priscilla Kailian Ang; Wei Chen; Andrew Thye Shen Wee; Kian Ping Loh
Journal:  J Am Chem Soc       Date:  2008-10-14       Impact factor: 15.419

10.  Electrostatic focusing of unlabelled DNA into nanoscale pores using a salt gradient.

Authors:  Meni Wanunu; Will Morrison; Yitzhak Rabin; Alexander Y Grosberg; Amit Meller
Journal:  Nat Nanotechnol       Date:  2009-12-20       Impact factor: 39.213

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  58 in total

1.  A biomimetic DNA-based channel for the ligand-controlled transport of charged molecular cargo across a biological membrane.

Authors:  Jonathan R Burns; Astrid Seifert; Niels Fertig; Stefan Howorka
Journal:  Nat Nanotechnol       Date:  2016-01-11       Impact factor: 39.213

Review 2.  Decoding DNA, RNA and peptides with quantum tunnelling.

Authors:  Massimiliano Di Ventra; Masateru Taniguchi
Journal:  Nat Nanotechnol       Date:  2016-02       Impact factor: 39.213

3.  Enhancing nanopore sensing with DNA nanotechnology.

Authors:  Ulrich F Keyser
Journal:  Nat Nanotechnol       Date:  2016-02       Impact factor: 39.213

Review 4.  Challenges in DNA motion control and sequence readout using nanopore devices.

Authors:  Spencer Carson; Meni Wanunu
Journal:  Nanotechnology       Date:  2015-02-02       Impact factor: 3.874

Review 5.  Building membrane nanopores.

Authors:  Stefan Howorka
Journal:  Nat Nanotechnol       Date:  2017-07-06       Impact factor: 39.213

Review 6.  Nanopore Sensing.

Authors:  Wenqing Shi; Alicia K Friedman; Lane A Baker
Journal:  Anal Chem       Date:  2016-11-18       Impact factor: 6.986

7.  Challenges and opportunities in graphene commercialization.

Authors:  Amaia Zurutuza; Claudio Marinelli
Journal:  Nat Nanotechnol       Date:  2014-10       Impact factor: 39.213

8.  Detection and Mapping of DNA Methylation with 2D Material Nanopores.

Authors:  Hu Qiu; Aditya Sarathy; Klaus Schulten; Jean-Pierre Leburton
Journal:  NPJ 2D Mater Appl       Date:  2017-04-11

9.  Tunable graphene quantum point contact transistor for DNA detection and characterization.

Authors:  Anuj Girdhar; Chaitanya Sathe; Klaus Schulten; Jean-Pierre Leburton
Journal:  Nanotechnology       Date:  2015-03-13       Impact factor: 3.874

10.  Tip-Based Nanofabrication of Arbitrary Shapes of Graphene Nanoribbons for Device Applications.

Authors:  Huan Hu; Shouvik Banerjee; David Estrada; Rashid Bashir; William P King
Journal:  RSC Adv       Date:  2015-04-15       Impact factor: 3.361

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