Literature DB >> 28681859

Building membrane nanopores.

Stefan Howorka1.   

Abstract

Membrane nanopores-hollow nanoscale barrels that puncture biological or synthetic membranes-have become powerful tools in chemical- and biosensing, and have achieved notable success in portable DNA sequencing. The pores can be self-assembled from a variety of materials, including proteins, peptides, synthetic organic compounds and, more recently, DNA. But which building material is best for which application, and what is the relationship between pore structure and function? In this Review, I critically compare the characteristics of the different building materials, and explore the influence of the building material on pore structure, dynamics and function. I also discuss the future challenges of developing nanopore technology, and consider what the next-generation of nanopore structures could be and where further practical applications might emerge.

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Year:  2017        PMID: 28681859     DOI: 10.1038/nnano.2017.99

Source DB:  PubMed          Journal:  Nat Nanotechnol        ISSN: 1748-3387            Impact factor:   39.213


  176 in total

1.  Stochastic sensing of organic analytes by a pore-forming protein containing a molecular adapter.

Authors:  L Q Gu; O Braha; S Conlan; S Cheley; H Bayley
Journal:  Nature       Date:  1999-04-22       Impact factor: 49.962

2.  Rapid electronic detection of probe-specific microRNAs using thin nanopore sensors.

Authors:  Meni Wanunu; Tali Dadosh; Vishva Ray; Jingmin Jin; Larry McReynolds; Marija Drndić
Journal:  Nat Nanotechnol       Date:  2010-10-24       Impact factor: 39.213

3.  A primary hydrogen-deuterium isotope effect observed at the single-molecule level.

Authors:  Siran Lu; Wen-Wu Li; Dvir Rotem; Ellina Mikhailova; Hagan Bayley
Journal:  Nat Chem       Date:  2010-09-12       Impact factor: 24.427

4.  Identification of single nucleotides in MoS2 nanopores.

Authors:  Jiandong Feng; Ke Liu; Roman D Bulushev; Sergey Khlybov; Dumitru Dumcenco; Andras Kis; Aleksandra Radenovic
Journal:  Nat Nanotechnol       Date:  2015-09-21       Impact factor: 39.213

5.  Temperature-responsive protein pores.

Authors:  Yuni Jung; Hagan Bayley; Liviu Movileanu
Journal:  J Am Chem Soc       Date:  2006-11-29       Impact factor: 15.419

6.  Hydrogel-encapsulated lipid membranes.

Authors:  Tae-Joon Jeon; Noah Malmstadt; Jacob J Schmidt
Journal:  J Am Chem Soc       Date:  2006-01-11       Impact factor: 15.419

7.  Artificial beta-barrels.

Authors:  Naomi Sakai; Jiri Mareda; Stefan Matile
Journal:  Acc Chem Res       Date:  2008-07-01       Impact factor: 22.384

Review 8.  Single molecule sensing with solid-state nanopores: novel materials, methods, and applications.

Authors:  Benjamin N Miles; Aleksandar P Ivanov; Kerry A Wilson; Fatma Doğan; Deanpen Japrung; Joshua B Edel
Journal:  Chem Soc Rev       Date:  2012-09-19       Impact factor: 54.564

Review 9.  Modeling and simulation of ion channels.

Authors:  Christopher Maffeo; Swati Bhattacharya; Jejoong Yoo; David Wells; Aleksei Aksimentiev
Journal:  Chem Rev       Date:  2012-10-04       Impact factor: 60.622

10.  An engineered dimeric protein pore that spans adjacent lipid bilayers.

Authors:  Shiksha Mantri; K Tanuj Sapra; Stephen Cheley; Thomas H Sharp; Hagan Bayley
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

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  34 in total

Review 1.  Beyond DNA and RNA: The Expanding Toolbox of Synthetic Genetics.

Authors:  Alexander I Taylor; Gillian Houlihan; Philipp Holliger
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-06-03       Impact factor: 10.005

2.  Probing membrane protein properties using droplet interface bilayers.

Authors:  Maxwell Allen-Benton; Heather E Findlay; Paula J Booth
Journal:  Exp Biol Med (Maywood)       Date:  2019-05-03

Review 3.  Regional and functional division of functional elements of solid-state nanochannels for enhanced sensitivity and specificity of biosensing in complex matrices.

Authors:  Pengcheng Gao; Dagui Wang; Cheng Che; Qun Ma; Xiaoqing Wu; Yajie Chen; Hongquan Xu; Xinchun Li; Yu Lin; Defang Ding; Xiaoding Lou; Fan Xia
Journal:  Nat Protoc       Date:  2021-07-28       Impact factor: 13.491

4.  Porphyrin-Assisted Docking of a Thermophage Portal Protein into Lipid Bilayers: Nanopore Engineering and Characterization.

Authors:  Benjamin Cressiot; Sandra J Greive; Wei Si; Tomas C Pascoa; Mehrnaz Mojtabavi; Maria Chechik; Huw T Jenkins; Xueguang Lu; Ke Zhang; Aleksei Aksimentiev; Alfred A Antson; Meni Wanunu
Journal:  ACS Nano       Date:  2017-11-15       Impact factor: 15.881

5.  Vesicle Tubulation with Self-Assembling DNA Nanosprings.

Authors:  Michael W Grome; Zhao Zhang; Frédéric Pincet; Chenxiang Lin
Journal:  Angew Chem Int Ed Engl       Date:  2018-04-14       Impact factor: 15.336

Review 6.  Engineering Lipid Membranes with Programmable DNA Nanostructures.

Authors:  Qi Shen; Michael W Grome; Yang Yang; Chenxiang Lin
Journal:  Adv Biosyst       Date:  2019-12-09

7.  Single-Molecule Protein Detection in a Biofluid Using a Quantitative Nanopore Sensor.

Authors:  Avinash Kumar Thakur; Liviu Movileanu
Journal:  ACS Sens       Date:  2019-08-21       Impact factor: 7.711

8.  Displacement chemistry-based nanopore analysis of nucleic acids in complicated matrices.

Authors:  Liang Wang; Xiaohan Chen; Shuo Zhou; Golbarg M Roozbahani; Youwen Zhang; Deqiang Wang; Xiyun Guan
Journal:  Chem Commun (Camb)       Date:  2018-12-11       Impact factor: 6.222

9.  Fullerene C60 containing porphyrin-like metal center as drug delivery system for ibuprofen drug.

Authors:  Elham Alipour; Farzaneh Alimohammady; Alexei Yumashev; Andino Maseleno
Journal:  J Mol Model       Date:  2019-12-13       Impact factor: 1.810

10.  Design, assembly, and characterization of membrane-spanning DNA nanopores.

Authors:  Conor Lanphere; Daniel Offenbartl-Stiegert; Adam Dorey; Genevieve Pugh; Elena Georgiou; Yongzheng Xing; Jonathan R Burns; Stefan Howorka
Journal:  Nat Protoc       Date:  2020-12-21       Impact factor: 13.491

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