Literature DB >> 23930664

15N-cholamine--a smart isotope tag for combining NMR- and MS-based metabolite profiling.

Fariba Tayyari1, G A Nagana Gowda, Haiwei Gu, Daniel Raftery.   

Abstract

Recently, the enhanced resolution and sensitivity offered by chemoselective isotope tags have enabled new and enhanced methods for detecting hundreds of quantifiable metabolites in biofluids using nuclear magnetic resonance (NMR) spectroscopy or mass spectrometry. However, the inability to effectively detect the same metabolites using both complementary analytical techniques has hindered the correlation of data derived from the two powerful platforms and thereby the maximization of their combined strengths for applications such as biomarker discovery and the identification of unknown metabolites. With the goal of alleviating this bottleneck, we describe a smart isotope tag, (15)N-cholamine, which possesses two important properties: an NMR sensitive isotope and a permanent charge for MS sensitivity. Using this tag, we demonstrate the detection of carboxyl group containing metabolites in both human serum and urine. By combining the individual strengths of the (15)N label and permanent charge, the smart isotope tag facilitates effective detection of the carboxyl-containing metabolome by both analytical methods. This study demonstrates a unique approach to exploit the combined strength of MS and NMR in the field of metabolomics.

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Year:  2013        PMID: 23930664      PMCID: PMC3803152          DOI: 10.1021/ac401712a

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  19 in total

1.  Quantitative analysis of blood plasma metabolites using isotope enhanced NMR methods.

Authors:  G A Nagana Gowda; Fariba Tayyari; Tao Ye; Yuliana Suryani; Siwei Wei; Narasimhamurthy Shanaiah; Daniel Raftery
Journal:  Anal Chem       Date:  2010-09-29       Impact factor: 6.986

2.  Suggested Improvement in the Ing-Manske Procedure and Gabriel Synthesis of Primary Amines: Kinetic Study on Alkaline Hydrolysis of N-Phthaloylglycine and Acid Hydrolysis of N-(o-Carboxybenzoyl)glycine in Aqueous Organic Solvents.

Authors:  M. Niyaz Khan
Journal:  J Org Chem       Date:  1996-11-15       Impact factor: 4.354

3.  Development of isotope labeling liquid chromatography-mass spectrometry for metabolic profiling of bacterial cells and its application for bacterial differentiation.

Authors:  Yiman Wu; Liang Li
Journal:  Anal Chem       Date:  2013-03-29       Impact factor: 6.986

4.  13C-formylation for improved nuclear magnetic resonance profiling of amino metabolites in biofluids.

Authors:  Tao Ye; Shucha Zhang; Huaping Mo; Fariba Tayyari; G A Nagana Gowda; Daniel Raftery
Journal:  Anal Chem       Date:  2010-03-15       Impact factor: 6.986

5.  In vitro stable isotope labeling for discovery of novel metabolites by liquid chromatography-mass spectrometry: Confirmation of gamma-tocopherol metabolism in human A549 cell.

Authors:  Wen-Chu Yang; Fred E Regnier; Qing Jiang; Jiri Adamec
Journal:  J Chromatogr A       Date:  2009-12-04       Impact factor: 4.759

Review 6.  Metabolomics-based methods for early disease diagnostics.

Authors:  G A Nagana Gowda; Shucha Zhang; Haiwei Gu; Vincent Asiago; Narasimhamurthy Shanaiah; Daniel Raftery
Journal:  Expert Rev Mol Diagn       Date:  2008-09       Impact factor: 5.225

7.  Enhancement of the LC/MS analysis of fatty acids through derivatization and stable isotope coding.

Authors:  Wen-Chu Yang; Jiri Adamec; Fred E Regnier
Journal:  Anal Chem       Date:  2007-05-11       Impact factor: 6.986

8.  Relative quantification of carboxylic acid metabolites by liquid chromatography-mass spectrometry using isotopic variants of cholamine.

Authors:  Shane M Lamos; Michael R Shortreed; Brian L Frey; Peter J Belshaw; Lloyd M Smith
Journal:  Anal Chem       Date:  2007-06-12       Impact factor: 6.986

9.  Differential 12C-/13C-isotope dansylation labeling and fast liquid chromatography/mass spectrometry for absolute and relative quantification of the metabolome.

Authors:  Kevin Guo; Liang Li
Journal:  Anal Chem       Date:  2009-05-15       Impact factor: 6.986

10.  Class selection of amino acid metabolites in body fluids using chemical derivatization and their enhanced 13C NMR.

Authors:  Narasimhamurthy Shanaiah; M Aruni Desilva; G A Nagana Gowda; Michael A Raftery; Bryan E Hainline; Daniel Raftery
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-02       Impact factor: 11.205

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  24 in total

Review 1.  NMR-based Stable Isotope Resolved Metabolomics in systems biochemistry.

Authors:  Andrew N Lane; Teresa W-M Fan
Journal:  Arch Biochem Biophys       Date:  2017-03-02       Impact factor: 4.013

2.  Chemical Isotope Labeling LC-MS for Metabolomics.

Authors:  Shuang Zhao; Liang Li
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

Review 3.  Can NMR solve some significant challenges in metabolomics?

Authors:  G A Nagana Gowda; Daniel Raftery
Journal:  J Magn Reson       Date:  2015-08-18       Impact factor: 2.229

4.  Synthesis of [15 N]-cholamine bromide hydrobromide.

Authors:  Judy Szeto; Remy Lemoine; Rosary Nguyen; Lori L Olson; Mary J Tanga
Journal:  J Labelled Comp Radiopharm       Date:  2018-03-30       Impact factor: 1.921

Review 5.  Emerging new strategies for successful metabolite identification in metabolomics.

Authors:  Kerem Bingol; Lei Bruschweiler-Li; Dawei Li; Bo Zhang; Mouzhe Xie; Rafael Brüschweiler
Journal:  Bioanalysis       Date:  2016-02-26       Impact factor: 2.681

Review 6.  Applications of NMR spectroscopy to systems biochemistry.

Authors:  Teresa W-M Fan; Andrew N Lane
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2016-02-06       Impact factor: 9.795

Review 7.  The future of NMR-based metabolomics.

Authors:  John L Markley; Rafael Brüschweiler; Arthur S Edison; Hamid R Eghbalnia; Robert Powers; Daniel Raftery; David S Wishart
Journal:  Curr Opin Biotechnol       Date:  2016-08-28       Impact factor: 9.740

Review 8.  Knowns and unknowns in metabolomics identified by multidimensional NMR and hybrid MS/NMR methods.

Authors:  Kerem Bingol; Rafael Brüschweiler
Journal:  Curr Opin Biotechnol       Date:  2016-08-20       Impact factor: 9.740

Review 9.  Beyond the paradigm: Combining mass spectrometry and nuclear magnetic resonance for metabolomics.

Authors:  Darrell D Marshall; Robert Powers
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2017-01-11       Impact factor: 9.795

10.  Stable Isotope-Resolved Metabolomics by NMR.

Authors:  Penghui Lin; Andrew N Lane; Teresa W-M Fan
Journal:  Methods Mol Biol       Date:  2019
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