Literature DB >> 23665581

eIF4E-bound mRNPs are substrates for nonsense-mediated mRNA decay in mammalian cells.

Simone C Rufener1, Oliver Mühlemann.   

Abstract

Eukaryotic mRNAs with premature translation termination codons (PTCs) are recognized and degraded through a process termed nonsense-mediated mRNA decay (NMD). The evolutionary conservation of the core NMD factors UPF1, UPF2 and UPF3 implies a similar basic mechanism of PTC recognition in all eukaryotes. However, while PTC-containing mRNAs in yeast seem to be available to NMD at each round of translation, mammalian NMD has been reported to be restricted to cap-binding complex (CBC)-bound mRNAs during the pioneer round of translation. Here, we compared decay kinetics of two NMD reporter genes in mRNA fractions bound to either CBC or the eukaryotic initiation factor 4E (eIF4E) in human cells and demonstrate that NMD destabilizes eIF4E-bound transcripts as efficiently as those associated with CBC. These results corroborate an emerging unified model for NMD substrate recognition, according to which NMD can ensue at every aberrant translation termination event.

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Year:  2013        PMID: 23665581     DOI: 10.1038/nsmb.2576

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  60 in total

1.  Ribosome loading onto the mRNA cap is driven by conformational coupling between eIF4G and eIF4E.

Authors:  John D Gross; Nathan J Moerke; Tobias von der Haar; Alexey A Lugovskoy; Alan B Sachs; John E G McCarthy; Gerhard Wagner
Journal:  Cell       Date:  2003-12-12       Impact factor: 41.582

2.  EJC-independent degradation of nonsense immunoglobulin-mu mRNA depends on 3' UTR length.

Authors:  Marc Bühler; Silvia Steiner; Fabio Mohn; Alexandra Paillusson; Oliver Mühlemann
Journal:  Nat Struct Mol Biol       Date:  2006-04-23       Impact factor: 15.369

3.  Pioneer round of translation occurs during serum starvation.

Authors:  Nara Oh; Kyoung Mi Kim; Hana Cho; Junho Choe; Yoon Ki Kim
Journal:  Biochem Biophys Res Commun       Date:  2007-08-08       Impact factor: 3.575

4.  Remodeling of the pioneer translation initiation complex involves translation and the karyopherin importin beta.

Authors:  Hanae Sato; Lynne E Maquat
Journal:  Genes Dev       Date:  2009-11-01       Impact factor: 11.361

Review 5.  Regulation of cytoplasmic mRNA decay.

Authors:  Daniel R Schoenberg; Lynne E Maquat
Journal:  Nat Rev Genet       Date:  2012-03-06       Impact factor: 53.242

6.  Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay.

Authors:  Isao Kashima; Akio Yamashita; Natsuko Izumi; Naoyuki Kataoka; Ryo Morishita; Shinichi Hoshino; Mutsuhito Ohno; Gideon Dreyfuss; Shigeo Ohno
Journal:  Genes Dev       Date:  2006-02-01       Impact factor: 11.361

7.  Interaction of eukaryotic translation initiation factor 4G with the nuclear cap-binding complex provides a link between nuclear and cytoplasmic functions of the m(7) guanosine cap.

Authors:  L McKendrick; E Thompson; J Ferreira; S J Morley; J D Lewis
Journal:  Mol Cell Biol       Date:  2001-06       Impact factor: 4.272

8.  Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.

Authors:  Alfredo Castello; Bernd Fischer; Katrin Eichelbaum; Rastislav Horos; Benedikt M Beckmann; Claudia Strein; Norman E Davey; David T Humphreys; Thomas Preiss; Lars M Steinmetz; Jeroen Krijgsveld; Matthias W Hentze
Journal:  Cell       Date:  2012-05-31       Impact factor: 41.582

9.  Cap-binding protein 1-mediated and eukaryotic translation initiation factor 4E-mediated pioneer rounds of translation in yeast.

Authors:  Qinshan Gao; Biswadip Das; Fred Sherman; Lynne E Maquat
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-07       Impact factor: 11.205

10.  The pioneer translation initiation complex is functionally distinct from but structurally overlaps with the steady-state translation initiation complex.

Authors:  Shang-Yi Chiu; Fabrice Lejeune; Aparna C Ranganathan; Lynne E Maquat
Journal:  Genes Dev       Date:  2004-04-01       Impact factor: 11.361

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  50 in total

Review 1.  Nonsense-mediated mRNA decay: an intricate machinery that shapes transcriptomes.

Authors:  Søren Lykke-Andersen; Torben Heick Jensen
Journal:  Nat Rev Mol Cell Biol       Date:  2015-09-23       Impact factor: 94.444

2.  Making sense of nonsense.

Authors:  Matthias W Hentze; Elisa Izaurralde
Journal:  Nat Struct Mol Biol       Date:  2013-06       Impact factor: 15.369

3.  Control of mRNA Stability in Fungi by NMD, EJC and CBC Factors Through 3'UTR Introns.

Authors:  Ying Zhang; Matthew S Sachs
Journal:  Genetics       Date:  2015-06-04       Impact factor: 4.562

Review 4.  Nonsense-Mediated mRNA Decay Begins Where Translation Ends.

Authors:  Evangelos D Karousis; Oliver Mühlemann
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-02-01       Impact factor: 10.005

Review 5.  Nonsense-Mediated mRNA Decay: Degradation of Defective Transcripts Is Only Part of the Story.

Authors:  Feng He; Allan Jacobson
Journal:  Annu Rev Genet       Date:  2015-10-02       Impact factor: 16.830

Review 6.  Nonsense-mediated mRNA decay in humans at a glance.

Authors:  Tatsuaki Kurosaki; Lynne E Maquat
Journal:  J Cell Sci       Date:  2016-01-19       Impact factor: 5.285

7.  Translation-dependent unwinding of stem-loops by UPF1 licenses Regnase-1 to degrade inflammatory mRNAs.

Authors:  Takashi Mino; Noriki Iwai; Masayuki Endo; Kentaro Inoue; Kotaro Akaki; Fabian Hia; Takuya Uehata; Tomoko Emura; Kumi Hidaka; Yutaka Suzuki; Daron M Standley; Mariko Okada-Hatakeyama; Shigeo Ohno; Hiroshi Sugiyama; Akio Yamashita; Osamu Takeuchi
Journal:  Nucleic Acids Res       Date:  2019-09-19       Impact factor: 16.971

Review 8.  Therapeutics based on stop codon readthrough.

Authors:  Kim M Keeling; Xiaojiao Xue; Gwen Gunn; David M Bedwell
Journal:  Annu Rev Genomics Hum Genet       Date:  2014-04-18       Impact factor: 8.929

9.  eIF4AIII enhances translation of nuclear cap-binding complex-bound mRNAs by promoting disruption of secondary structures in 5'UTR.

Authors:  Junho Choe; Incheol Ryu; Ok Hyun Park; Joori Park; Hana Cho; Jin Seon Yoo; Sung Wook Chi; Min Kyung Kim; Hyun Kyu Song; Yoon Ki Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-13       Impact factor: 11.205

Review 10.  Regulation of natural mRNAs by the nonsense-mediated mRNA decay pathway.

Authors:  Megan Peccarelli; Bessie W Kebaara
Journal:  Eukaryot Cell       Date:  2014-07-18
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