Literature DB >> 16452507

Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay.

Isao Kashima1, Akio Yamashita, Natsuko Izumi, Naoyuki Kataoka, Ryo Morishita, Shinichi Hoshino, Mutsuhito Ohno, Gideon Dreyfuss, Shigeo Ohno.   

Abstract

Nonsense-mediated mRNA decay (NMD) is a surveillance mechanism that degrades mRNA containing premature termination codons (PTCs). In mammalian cells, recognition of PTCs requires translation and depends on the presence on the mRNA with the splicing-dependent exon junction complex (EJC). While it is known that a key event in the triggering of NMD is phosphorylation of the trans-acting factor, Upf1, by SMG-1, the relationship between Upf1 phosphorylation and PTC recognition remains undetermined. Here we show that SMG-1 binds to the mRNA-associated components of the EJC, Upf2, Upf3b, eIF4A3, Magoh, and Y14. Further, we describe a novel complex that contains the NMD factors SMG-1 and Upf1, and the translation termination release factors eRF1 and eRF3 (SURF). Importantly, an association between SURF and the EJC is required for SMG-1-mediated Upf1 phosphorylation and NMD. Thus, the SMG-1-mediated phosphorylation of Upf1 occurs on the association of SURF with EJC, which provides the link between the EJC and recognition of PTCs and triggers NMD.

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Year:  2006        PMID: 16452507      PMCID: PMC1361706          DOI: 10.1101/gad.1389006

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  68 in total

1.  Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5' to 3' mRNA decay pathways in yeast.

Authors:  Feng He; Xiangrui Li; Phyllis Spatrick; Ryan Casillo; Shuyun Dong; Allan Jacobson
Journal:  Mol Cell       Date:  2003-12       Impact factor: 17.970

2.  eIF4A3 is a novel component of the exon junction complex.

Authors:  Chia C Chan; Josee Dostie; Michael D Diem; Wenqin Feng; Matthias Mann; Juri Rappsilber; Gideon Dreyfuss
Journal:  RNA       Date:  2004-02       Impact factor: 4.942

3.  SMG7 is a 14-3-3-like adaptor in the nonsense-mediated mRNA decay pathway.

Authors:  Noemi Fukuhara; Judith Ebert; Leonie Unterholzner; Doris Lindner; Elisa Izaurralde; Elena Conti
Journal:  Mol Cell       Date:  2005-02-18       Impact factor: 17.970

Review 4.  The role of SMG-1 in nonsense-mediated mRNA decay.

Authors:  Akio Yamashita; Isao Kashima; Shigeo Ohno
Journal:  Biochim Biophys Acta       Date:  2005-10-25

5.  Exon-junction complex components specify distinct routes of nonsense-mediated mRNA decay with differential cofactor requirements.

Authors:  Niels H Gehring; Joachim B Kunz; Gabriele Neu-Yilik; Stephen Breit; Marcelo H Viegas; Matthias W Hentze; Andreas E Kulozik
Journal:  Mol Cell       Date:  2005-10-07       Impact factor: 17.970

Review 6.  From birth to death: the complex lives of eukaryotic mRNAs.

Authors:  Melissa J Moore
Journal:  Science       Date:  2005-09-02       Impact factor: 47.728

7.  CBP80 promotes interaction of Upf1 with Upf2 during nonsense-mediated mRNA decay in mammalian cells.

Authors:  Nao Hosoda; Yoon Ki Kim; Fabrice Lejeune; Lynne E Maquat
Journal:  Nat Struct Mol Biol       Date:  2005-09-25       Impact factor: 15.369

8.  An eIF4AIII-containing complex required for mRNA localization and nonsense-mediated mRNA decay.

Authors:  Isabel M Palacios; David Gatfield; Daniel St Johnston; Elisa Izaurralde
Journal:  Nature       Date:  2004-02-19       Impact factor: 49.962

9.  Overexpression of Upf1p compensates for mitochondrial splicing deficiency independently of its role in mRNA surveillance.

Authors:  B de Pinto; R Lippolis; R Castaldo; N Altamura
Journal:  Mol Microbiol       Date:  2004-02       Impact factor: 3.501

10.  Phosphorylation of hUPF1 induces formation of mRNA surveillance complexes containing hSMG-5 and hSMG-7.

Authors:  Tetsuo Ohnishi; Akio Yamashita; Isao Kashima; Thomas Schell; Kirk R Anders; Andrew Grimson; Takahisa Hachiya; Matthias W Hentze; Philip Anderson; Shigeo Ohno
Journal:  Mol Cell       Date:  2003-11       Impact factor: 17.970

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  288 in total

1.  Translation drives mRNA quality control.

Authors:  Christopher J Shoemaker; Rachel Green
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

2.  The exon junction complex differentially marks spliced junctions.

Authors:  Jérôme Saulière; Nazmul Haque; Scot Harms; Isabelle Barbosa; Marco Blanchette; Hervé Le Hir
Journal:  Nat Struct Mol Biol       Date:  2010-09-05       Impact factor: 15.369

3.  Insights into the recruitment of the NMD machinery from the crystal structure of a core EJC-UPF3b complex.

Authors:  Gretel Buchwald; Judith Ebert; Claire Basquin; Jerome Sauliere; Uma Jayachandran; Fulvia Bono; Hervé Le Hir; Elena Conti
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-17       Impact factor: 11.205

4.  Smg1 is required for embryogenesis and regulates diverse genes via alternative splicing coupled to nonsense-mediated mRNA decay.

Authors:  David R McIlwain; Qun Pan; Patrick T Reilly; Andrew J Elia; Susan McCracken; Andrew C Wakeham; Annick Itie-Youten; Benjamin J Blencowe; Tak W Mak
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-21       Impact factor: 11.205

Review 5.  Mechanisms of deadenylation-dependent decay.

Authors:  Chyi-Ying A Chen; Ann-Bin Shyu
Journal:  Wiley Interdiscip Rev RNA       Date:  2010-09-15       Impact factor: 9.957

Review 6.  Nonsense-mediated mRNA decay: an intricate machinery that shapes transcriptomes.

Authors:  Søren Lykke-Andersen; Torben Heick Jensen
Journal:  Nat Rev Mol Cell Biol       Date:  2015-09-23       Impact factor: 94.444

Review 7.  The exon junction complex as a node of post-transcriptional networks.

Authors:  Hervé Le Hir; Jérôme Saulière; Zhen Wang
Journal:  Nat Rev Mol Cell Biol       Date:  2015-12-16       Impact factor: 94.444

8.  Nonsense-mediated mRNA decay involves two distinct Upf1-bound complexes.

Authors:  Marine Dehecq; Laurence Decourty; Abdelkader Namane; Caroline Proux; Joanne Kanaan; Hervé Le Hir; Alain Jacquier; Cosmin Saveanu
Journal:  EMBO J       Date:  2018-10-01       Impact factor: 11.598

9.  The canonical UPF1-dependent nonsense-mediated mRNA decay is inhibited in transcripts carrying a short open reading frame independent of sequence context.

Authors:  Ana Luísa Silva; Francisco J C Pereira; Ana Morgado; Jian Kong; Rute Martins; Paula Faustino; Stephen A Liebhaber; Luísa Romão
Journal:  RNA       Date:  2006-10-31       Impact factor: 4.942

Review 10.  Nonsense-mediated decay in genetic disease: friend or foe?

Authors:  Jake N Miller; David A Pearce
Journal:  Mutat Res Rev Mutat Res       Date:  2014-05-28       Impact factor: 5.657

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