Literature DB >> 26436458

Nonsense-Mediated mRNA Decay: Degradation of Defective Transcripts Is Only Part of the Story.

Feng He1, Allan Jacobson1.   

Abstract

Nonsense-mediated mRNA decay (NMD) is a eukaryotic surveillance mechanism that monitors cytoplasmic mRNA translation and targets mRNAs undergoing premature translation termination for rapid degradation. From yeasts to humans, activation of NMD requires the function of the three conserved Upf factors: Upf1, Upf2, and Upf3. Here, we summarize the progress in our understanding of the molecular mechanisms of NMD in several model systems and discuss recent experiments that address the roles of Upf1, the principal regulator of NMD, in the initial targeting and final degradation of NMD-susceptible mRNAs. We propose a unified model for NMD in which the Upf factors provide several functions during premature termination, including the stimulation of release factor activity and the dissociation and recycling of ribosomal subunits. In this model, the ultimate degradation of the mRNA is the last step in a complex premature termination process.

Entities:  

Keywords:  Upf proteins; quality control; ribosome dissociation; translation termination

Mesh:

Substances:

Year:  2015        PMID: 26436458      PMCID: PMC4837945          DOI: 10.1146/annurev-genet-112414-054639

Source DB:  PubMed          Journal:  Annu Rev Genet        ISSN: 0066-4197            Impact factor:   16.830


  243 in total

1.  Multiple processing body factors and the ARE binding protein TTP activate mRNA decapping.

Authors:  Martin Fenger-Grøn; Christy Fillman; Bodil Norrild; Jens Lykke-Andersen
Journal:  Mol Cell       Date:  2005-12-22       Impact factor: 17.970

2.  Structural basis of the PNRC2-mediated link between mrna surveillance and decapping.

Authors:  Tingfeng Lai; Hana Cho; Zhou Liu; Matthew W Bowler; Shunfu Piao; Roy Parker; Yoon Ki Kim; Haiwei Song
Journal:  Structure       Date:  2012-10-18       Impact factor: 5.006

3.  Postnatal manipulation of Pax6 dosage reverses congenital tissue malformation defects.

Authors:  Cheryl Y Gregory-Evans; Xia Wang; Kishor M Wasan; Jinying Zhao; Andrew L Metcalfe; Kevin Gregory-Evans
Journal:  J Clin Invest       Date:  2013-12-20       Impact factor: 14.808

4.  Polysome-associated mRNAs are substrates for the nonsense-mediated mRNA decay pathway in Saccharomyces cerevisiae.

Authors:  S Zhang; E M Welch; K Hogan; A H Brown; S W Peltz; A Jacobson
Journal:  RNA       Date:  1997-03       Impact factor: 4.942

5.  Regulation of axon guidance by compartmentalized nonsense-mediated mRNA decay.

Authors:  Dilek Colak; Sheng-Jian Ji; Bo T Porse; Samie R Jaffrey
Journal:  Cell       Date:  2013-06-06       Impact factor: 41.582

6.  Human SMG-1, a novel phosphatidylinositol 3-kinase-related protein kinase, associates with components of the mRNA surveillance complex and is involved in the regulation of nonsense-mediated mRNA decay.

Authors:  A Yamashita; T Ohnishi; I Kashima; Y Taya; S Ohno
Journal:  Genes Dev       Date:  2001-09-01       Impact factor: 11.361

7.  Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis.

Authors:  Yukio Kurihara; Akihiro Matsui; Kousuke Hanada; Makiko Kawashima; Junko Ishida; Taeko Morosawa; Maho Tanaka; Eli Kaminuma; Yoshiki Mochizuki; Akihiro Matsushima; Tetsuro Toyoda; Kazuo Shinozaki; Motoaki Seki
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-30       Impact factor: 11.205

8.  Evidence to implicate translation by ribosomes in the mechanism by which nonsense codons reduce the nuclear level of human triosephosphate isomerase mRNA.

Authors:  P Belgrader; J Cheng; L E Maquat
Journal:  Proc Natl Acad Sci U S A       Date:  1993-01-15       Impact factor: 11.205

9.  Nonsense-mediated mRNA decay occurs during eIF4F-dependent translation in human cells.

Authors:  Sébastien Durand; Jens Lykke-Andersen
Journal:  Nat Struct Mol Biol       Date:  2013-05-12       Impact factor: 15.369

10.  Long 3'-UTRs target wild-type mRNAs for nonsense-mediated mRNA decay in Saccharomyces cerevisiae.

Authors:  Bessie W Kebaara; Audrey L Atkin
Journal:  Nucleic Acids Res       Date:  2009-03-06       Impact factor: 16.971

View more
  120 in total

1.  Reactivation of nonsense-mediated mRNA decay protects against C9orf72 dipeptide-repeat neurotoxicity.

Authors:  Wangchao Xu; Puhua Bao; Xin Jiang; Haifang Wang; Meiling Qin; Ruiqi Wang; Tao Wang; Yi Yang; Ileana Lorenzini; Lujian Liao; Rita Sattler; Jin Xu
Journal:  Brain       Date:  2019-05-01       Impact factor: 13.501

2.  Translation dysregulation in neurodegenerative disorders.

Authors:  Daryl A Bosco
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-30       Impact factor: 11.205

3.  Proposing a mechanism of action for ataluren.

Authors:  Nadeem Siddiqui; Nahum Sonenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-19       Impact factor: 11.205

Review 4.  RNA decay, evolution, and the testis.

Authors:  Samantha H Jones; Miles Wilkinson
Journal:  RNA Biol       Date:  2016-12-02       Impact factor: 4.652

Review 5.  Nonsense-Mediated mRNA Decay Begins Where Translation Ends.

Authors:  Evangelos D Karousis; Oliver Mühlemann
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-02-01       Impact factor: 10.005

Review 6.  On the edge of degradation: Autophagy regulation by RNA decay.

Authors:  Elizabeth Delorme-Axford; Daniel J Klionsky
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-12-17       Impact factor: 9.957

7.  Nonsense-mediated mRNA decay involves two distinct Upf1-bound complexes.

Authors:  Marine Dehecq; Laurence Decourty; Abdelkader Namane; Caroline Proux; Joanne Kanaan; Hervé Le Hir; Alain Jacquier; Cosmin Saveanu
Journal:  EMBO J       Date:  2018-10-01       Impact factor: 11.598

Review 8.  Role of the C9ORF72 Gene in the Pathogenesis of Amyotrophic Lateral Sclerosis and Frontotemporal Dementia.

Authors:  Zongbing Hao; Rui Wang; Haigang Ren; Guanghui Wang
Journal:  Neurosci Bull       Date:  2020-08-29       Impact factor: 5.203

9.  The Arabidopsis sickle Mutant Exhibits Altered Circadian Clock Responses to Cool Temperatures and Temperature-Dependent Alternative Splicing.

Authors:  Carine M Marshall; Virginia Tartaglio; Maritza Duarte; Frank G Harmon
Journal:  Plant Cell       Date:  2016-09-13       Impact factor: 11.277

10.  Poly(A)-Binding Protein Regulates the Efficiency of Translation Termination.

Authors:  Chan Wu; Bijoyita Roy; Feng He; Kevin Yan; Allan Jacobson
Journal:  Cell Rep       Date:  2020-11-17       Impact factor: 9.423

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.