Literature DB >> 23424548

(1S,3R,8R,9S,11R)-2,2,10,10-Tetra-chloro-3,7,7,11-tetra-methyl-tetra-cyclo-[6.5.0.0(1,3).0(9,11)]trideca-ne.

Najia Ourhriss1, Ahmed Benharref, Mohamed Saadi, Lahcen El Ammari, Moha Berraho.   

Abstract

The title compound, C(17)H(24)Cl(4), was synthesized from β-himachalene (3,5,5,9-tetra-methyl-2,4a,5,6,7,8-hexa-hydro-1H-benzocyclo-heptene), which was isolated from the essential oil of the Atlas cedar (Cedrus Atlantica). The mol-ecule is built up from fused six- and seven-membered rings and two three-membered rings from the reaction of β-himachalene with dichloro-carbene. The six-membered ring shows a chair conformation, whereas the seven-membered ring displays a boat conformation.

Entities:  

Year:  2013        PMID: 23424548      PMCID: PMC3569802          DOI: 10.1107/S1600536813001700

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the isolation of β-himachalene, see: Joseph & Dev (1968 ▶); Plattier & Teisseire (1974 ▶). For the reactivity of this sesquiterpene, see: Lassaba et al. (1998 ▶); Chekroun et al. (2000 ▶); El Jamili et al. (2002 ▶); Sbai et al. (2002 ▶); Dakir et al. (2004 ▶). For its biological activity, see: Daoubi et al. (2004 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C17H24Cl4 M = 370.16 Monoclinic, a = 8.8807 (6) Å b = 11.6280 (8) Å c = 9.0596 (6) Å β = 107.665 (2)° V = 891.42 (10) Å3 Z = 2 Mo Kα radiation μ = 0.66 mm−1 T = 296 K 0.41 × 0.35 × 0.27 mm

Data collection

Bruker X8 APEX diffractometer 15112 measured reflections 5419 independent reflections 4910 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.085 S = 1.03 5419 reflections 190 parameters 1 restraint H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.19 e Å−3 Absolute structure: Flack (1983 ▶) Flack parameter: 0.04 (4) Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶) and publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813001700/bt6883sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813001700/bt6883Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813001700/bt6883Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H24Cl4F(000) = 388
Mr = 370.16Dx = 1.379 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 5419 reflections
a = 8.8807 (6) Åθ = 2.8–30.5°
b = 11.6280 (8) ŵ = 0.66 mm1
c = 9.0596 (6) ÅT = 296 K
β = 107.665 (2)°Block, colourless
V = 891.42 (10) Å30.41 × 0.35 × 0.27 mm
Z = 2
Bruker X8 APEX diffractometer4910 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.019
Graphite monochromatorθmax = 30.5°, θmin = 2.8°
φ and ω scansh = −12→12
15112 measured reflectionsk = −16→16
5419 independent reflectionsl = −12→12
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.032H-atom parameters constrained
wR(F2) = 0.085w = 1/[σ2(Fo2) + (0.0491P)2 + 0.074P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max = 0.001
5419 reflectionsΔρmax = 0.32 e Å3
190 parametersΔρmin = −0.19 e Å3
1 restraintAbsolute structure: Flack (1983)
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.04 (4)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.38317 (6)0.32772 (6)0.92294 (6)0.06701 (17)
Cl20.52164 (6)0.12723 (5)0.83384 (6)0.05443 (13)
Cl30.78628 (6)0.23092 (5)1.13768 (5)0.05374 (13)
Cl41.12169 (5)0.25246 (4)1.19453 (5)0.04960 (12)
C10.62379 (15)0.35612 (13)0.77816 (16)0.0288 (3)
C20.49711 (18)0.27743 (16)0.80650 (18)0.0391 (4)
C30.47133 (16)0.32604 (17)0.64690 (18)0.0380 (3)
C40.48758 (19)0.24243 (18)0.52377 (18)0.0431 (4)
H4A0.55520.17910.57330.052*
H4B0.38450.21110.46920.052*
C50.5566 (2)0.2997 (2)0.40815 (19)0.0518 (5)
H5A0.47290.33960.33110.062*
H5B0.59800.24080.35520.062*
C60.6879 (2)0.38477 (18)0.48244 (18)0.0442 (4)
H6A0.63930.45060.51560.053*
H6B0.73060.41160.40190.053*
C70.82871 (16)0.34716 (14)0.62113 (16)0.0324 (3)
C80.77955 (14)0.30517 (11)0.76794 (14)0.0244 (2)
H80.77170.22490.75790.029*
C90.91820 (15)0.32805 (12)0.91322 (15)0.0269 (2)
H91.01840.31430.88840.032*
C100.93290 (17)0.29978 (13)1.07857 (15)0.0317 (3)
C110.91735 (18)0.42382 (14)1.02843 (17)0.0350 (3)
C120.7581 (2)0.48145 (17)1.0110 (2)0.0474 (4)
H12A0.77660.56131.04200.057*
H12B0.70950.44461.08120.057*
C130.64262 (19)0.47670 (14)0.84681 (19)0.0377 (3)
H13A0.54020.50440.84880.045*
H13B0.67980.52770.78060.045*
C140.3446 (2)0.4161 (2)0.5839 (2)0.0545 (5)
H14A0.36480.48160.65160.082*
H14B0.24300.38440.57750.082*
H14C0.34570.43950.48260.082*
C150.9169 (2)0.2471 (2)0.57360 (19)0.0469 (4)
H15A0.85130.17980.55500.070*
H15B1.01280.23180.65520.070*
H15C0.94180.26720.48090.070*
C160.9411 (2)0.45147 (18)0.6573 (2)0.0459 (4)
H16A1.02900.43530.74710.069*
H16B0.88540.51770.67670.069*
H16C0.97890.46640.57040.069*
C171.0594 (2)0.50220 (16)1.0855 (2)0.0529 (5)
H17A1.03200.57811.04430.079*
H17B1.14460.47291.05180.079*
H17C1.09170.50531.19670.079*
U11U22U33U12U13U23
Cl10.0372 (2)0.1166 (5)0.0572 (3)0.0018 (3)0.0294 (2)−0.0039 (3)
Cl20.0510 (2)0.0575 (3)0.0527 (3)−0.0213 (2)0.0126 (2)0.0075 (2)
Cl30.0529 (2)0.0783 (3)0.03199 (18)−0.0149 (2)0.01578 (16)0.00474 (19)
Cl40.0432 (2)0.0512 (2)0.03845 (19)0.00492 (18)−0.01151 (15)0.00149 (18)
C10.0203 (5)0.0383 (7)0.0276 (6)0.0004 (5)0.0068 (5)−0.0003 (5)
C20.0253 (6)0.0579 (10)0.0358 (7)−0.0060 (6)0.0120 (5)−0.0007 (7)
C30.0202 (6)0.0576 (10)0.0339 (7)−0.0013 (6)0.0046 (5)0.0000 (7)
C40.0305 (7)0.0607 (10)0.0318 (7)−0.0065 (7)−0.0001 (5)−0.0055 (7)
C50.0408 (8)0.0849 (15)0.0247 (7)−0.0039 (9)0.0024 (6)−0.0019 (8)
C60.0364 (8)0.0666 (12)0.0288 (7)0.0003 (7)0.0089 (6)0.0111 (7)
C70.0268 (6)0.0455 (8)0.0260 (6)−0.0005 (6)0.0095 (5)0.0001 (6)
C80.0209 (5)0.0299 (6)0.0212 (5)0.0004 (5)0.0049 (4)−0.0022 (5)
C90.0220 (5)0.0327 (6)0.0244 (6)0.0006 (5)0.0048 (4)−0.0024 (5)
C100.0295 (6)0.0385 (7)0.0234 (6)0.0007 (6)0.0023 (5)−0.0018 (5)
C110.0321 (7)0.0350 (7)0.0317 (7)0.0009 (6)0.0006 (5)−0.0070 (6)
C120.0456 (9)0.0486 (9)0.0434 (9)0.0131 (7)0.0066 (7)−0.0172 (7)
C130.0319 (7)0.0384 (8)0.0412 (8)0.0100 (6)0.0087 (6)−0.0023 (6)
C140.0264 (7)0.0793 (14)0.0513 (10)0.0126 (8)0.0020 (7)0.0039 (10)
C150.0433 (8)0.0676 (11)0.0341 (7)0.0100 (8)0.0184 (6)−0.0059 (8)
C160.0372 (8)0.0578 (11)0.0453 (9)−0.0095 (7)0.0162 (7)0.0063 (8)
C170.0513 (10)0.0410 (9)0.0527 (10)−0.0117 (8)−0.0050 (8)−0.0085 (8)
Cl1—C21.7682 (17)C8—H80.9380
Cl2—C21.768 (2)C9—C101.5001 (19)
Cl3—C101.7454 (16)C9—C111.528 (2)
Cl4—C101.7744 (14)C9—H90.9951
C1—C131.522 (2)C10—C111.506 (2)
C1—C21.531 (2)C11—C171.515 (2)
C1—C81.5332 (17)C11—C121.529 (2)
C1—C31.5468 (19)C12—C131.530 (2)
C2—C31.504 (2)C12—H12A0.9700
C3—C141.517 (2)C12—H12B0.9700
C3—C41.519 (2)C13—H13A0.9700
C4—C51.519 (3)C13—H13B0.9700
C4—H4A0.9700C14—H14A0.9600
C4—H4B0.9700C14—H14B0.9600
C5—C61.521 (3)C14—H14C0.9600
C5—H5A0.9700C15—H15A0.9600
C5—H5B0.9700C15—H15B0.9600
C6—C71.543 (2)C15—H15C0.9600
C6—H6A0.9700C16—H16A0.9600
C6—H6B0.9700C16—H16B0.9600
C7—C151.536 (2)C16—H16C0.9600
C7—C161.541 (2)C17—H17A0.9600
C7—C81.5970 (19)C17—H17B0.9600
C8—C91.5283 (17)C17—H17C0.9600
C13—C1—C2118.50 (12)C10—C9—H9112.2
C13—C1—C8113.04 (11)C11—C9—H9117.5
C2—C1—C8120.10 (13)C8—C9—H9108.6
C13—C1—C3118.97 (13)C9—C10—C1161.10 (10)
C2—C1—C358.50 (10)C9—C10—Cl3124.05 (10)
C8—C1—C3117.48 (12)C11—C10—Cl3121.55 (11)
C3—C2—C161.28 (10)C9—C10—Cl4116.07 (10)
C3—C2—Cl2118.84 (13)C11—C10—Cl4117.34 (11)
C1—C2—Cl2123.25 (12)Cl3—C10—Cl4109.57 (8)
C3—C2—Cl1120.10 (13)C10—C11—C17118.86 (14)
C1—C2—Cl1119.01 (12)C10—C11—C959.27 (9)
Cl2—C2—Cl1108.16 (9)C17—C11—C9119.72 (15)
C2—C3—C14120.05 (14)C10—C11—C12116.63 (15)
C2—C3—C4116.41 (16)C17—C11—C12114.83 (15)
C14—C3—C4112.99 (14)C9—C11—C12116.42 (12)
C2—C3—C160.23 (9)C11—C12—C13114.26 (13)
C14—C3—C1120.64 (16)C11—C12—H12A108.7
C4—C3—C1116.95 (12)C13—C12—H12A108.7
C5—C4—C3111.97 (17)C11—C12—H12B108.7
C5—C4—H4A109.2C13—C12—H12B108.7
C3—C4—H4A109.2H12A—C12—H12B107.6
C5—C4—H4B109.2C1—C13—C12112.86 (13)
C3—C4—H4B109.2C1—C13—H13A109.0
H4A—C4—H4B107.9C12—C13—H13A109.0
C4—C5—C6113.30 (13)C1—C13—H13B109.0
C4—C5—H5A108.9C12—C13—H13B109.0
C6—C5—H5A108.9H13A—C13—H13B107.8
C4—C5—H5B108.9C3—C14—H14A109.5
C6—C5—H5B108.9C3—C14—H14B109.5
H5A—C5—H5B107.7H14A—C14—H14B109.5
C5—C6—C7119.92 (16)C3—C14—H14C109.5
C5—C6—H6A107.3H14A—C14—H14C109.5
C7—C6—H6A107.3H14B—C14—H14C109.5
C5—C6—H6B107.3C7—C15—H15A109.5
C7—C6—H6B107.3C7—C15—H15B109.5
H6A—C6—H6B106.9H15A—C15—H15B109.5
C15—C7—C16107.65 (13)C7—C15—H15C109.5
C15—C7—C6110.06 (13)H15A—C15—H15C109.5
C16—C7—C6105.23 (14)H15B—C15—H15C109.5
C15—C7—C8107.07 (13)C7—C16—H16A109.5
C16—C7—C8112.76 (12)C7—C16—H16B109.5
C6—C7—C8113.95 (11)H16A—C16—H16B109.5
C9—C8—C1112.74 (10)C7—C16—H16C109.5
C9—C8—C7108.15 (10)H16A—C16—H16C109.5
C1—C8—C7114.32 (11)H16B—C16—H16C109.5
C9—C8—H8105.9C11—C17—H17A109.5
C1—C8—H8110.4C11—C17—H17B109.5
C7—C8—H8104.7H17A—C17—H17B109.5
C10—C9—C1159.64 (10)C11—C17—H17C109.5
C10—C9—C8128.69 (12)H17A—C17—H17C109.5
C11—C9—C8123.06 (11)H17B—C17—H17C109.5
  5 in total

1.  Regio- and stereoselectivity of beta-himachalene epoxidation by m-CPBA. A theoretical study.

Authors:  A Chekroun; A Jarid; A Benharref; A Boutalib
Journal:  J Org Chem       Date:  2000-07-14       Impact factor: 4.354

2.  Screening study for potential lead compounds for natural product-based fungicides: I. Synthesis and in vitro evaluation of coumarins against Botrytis cinerea.

Authors:  Mourad Daoubi; Rosa Durán-Patrón; Mohamed Hmamouchi; Rosario Hernández-Galán; Ahmed Benharref; Isidro G Collado
Journal:  Pest Manag Sci       Date:  2004-09       Impact factor: 4.845

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  (1S,3R,8S,9S,10R)-2,2-Dichloro-9,10-epoxy-3,7,7,10-tetramethyltricyclo[6.4.0.0(1,3)]dodecane and (1S,3R,8S,10R)-2,2-dichloro-3,7,7,10-tetramethyltricyclo[6.4.0.0(1,3)]dodecan-9-one.

Authors:  F Sbai; M Dakir; A Auhmani; H El Jamili; M Akssira; A Benharref; A Kenz; M Pierrot
Journal:  Acta Crystallogr C       Date:  2002-07-31       Impact factor: 1.172

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total
  7 in total

1.  (1S,3S,8R,9S,11R)-10,10-Di-chloro-3,7,7,11-tetra-methyl-tetra-cyclo[6.5.0.0(1,3).0(9,11)]trideca-ne.

Authors:  Ahmed Benharref; Najia Ourhriss; Lahcen El Ammari; Mohamed Saadi; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-22

2.  (1S,3R,8R,10R)-2,2-Di-bromo-3,7,7,10-tetra-methyl-tri-cyclo-[6.4.0.0(1,3)]dodecan-9-one.

Authors:  Ahmed Benharref; Noureddine Mazoir; Jean-Claude Daran; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-11-16

3.  (1S,2R,3S,6S,7R)-3,7,11,11-Tetra-methyl-6,7-epoxybi-cyclo-[5.4.0]undecane-2-ol.

Authors:  Mohamed Loubidi; Ahmed Benharref; Lahcen El Ammari; Mohamed Saadi; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-04-26

4.  (1S,3R,8R,9S,11R)-2,2-Di-bromo-10,10-di-chloro-3,7,7,11-tetra-methyl-tetra-cyclo-[6.5.0.0(1,3).0(9,11)]trideca-ne.

Authors:  Najia Ourhriss; Ahmed Benharref; Mohamed Saadi; Moha Berraho; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-04-13

5.  (1S,3R,8R,9S,11R)-10,10-Di-bromo-2,2-di-chloro-3,7,7,11-tetra-methyl-tetra-cyclo-[6.5.0.0(1,3).0(9,11)]trideca-ne.

Authors:  Abdelouahd Oukhrib; Ahmed Benharref; Mohamed Saadi; Moha Berraho; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-04-17

6.  (1S,3S,8R,10R,11R)-3,7,7,10-Tetra-methyl-tri-cyclo-[6.4.0.0(1,3)]dodecan-11-ol.

Authors:  Ahmed Benharref; Jamal El Karroumi; Lahcen El Ammari; Mohamed Saadi; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-07-31

7.  (1S,3R,8R,11S)-11-Bromo-10-bromo-methyl-2,2-di-chloro-3,7,7-tri-methyl-tricyclo-[6.4.0.0(1,3)]dodec-9-ene.

Authors:  Ahmed Benharref; Jamal El Karroumi; Lahcen El Ammari; Mohamed Saadi; Moha Berraho
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-07-20
  7 in total

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