| Literature DB >> 24109416 |
Ahmed Benharref1, Jamal El Karroumi, Lahcen El Ammari, Mohamed Saadi, Moha Berraho.
Abstract
The title compound, C16H28O, was synthesized by three steps from β-himachalene (3,5,5,9-tetra-methyl-2,4a,5,6,7,8-hexa-hydro-1H-benzo-cyclo-heptene), which was isolated from the essential oil of the Atlas cedar (Cedrus atlantica). The mol-ecule is built up from fused six- and seven-membered rings and an appended three-membered ring. The six-membered ring has twist-boat conformation, whereas the seven-membered ring displays a chair conformation. In the crystal, mol-ecules are linked into chains propagating along the a-axis direction by O-H⋯O hydrogen bonds.Entities:
Year: 2013 PMID: 24109416 PMCID: PMC3793829 DOI: 10.1107/S1600536813020576
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H28O | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 1724 reflections |
| θ = 2.7–26.4° | |
| µ = 0.07 mm−1 | |
| Prism, colourless | |
| 0.25 × 0.15 × 0.10 mm |
| Bruker APEXII CCD diffractometer | 1485 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 26.4°, θmin = 2.7° |
| ω and φ scans | |
| 8482 measured reflections | |
| 1724 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1724 reflections | Δρmax = 0.15 e Å−3 |
| 160 parameters | Δρmin = −0.12 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.012 (3) |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| C1 | 0.8389 (3) | 1.04007 (14) | 0.11966 (10) | 0.0381 (4) | |
| C2 | 0.9711 (4) | 1.13257 (15) | 0.14824 (11) | 0.0510 (5) | |
| H2A | 1.1339 | 1.1244 | 0.1544 | 0.061* | |
| H2B | 0.9231 | 1.2021 | 0.1342 | 0.061* | |
| C3 | 0.8171 (4) | 1.07206 (16) | 0.19602 (11) | 0.0467 (5) | |
| C4 | 0.9300 (4) | 1.00520 (18) | 0.25137 (11) | 0.0585 (6) | |
| H4A | 0.9184 | 1.0411 | 0.2958 | 0.070* | |
| H4B | 1.0904 | 0.9991 | 0.2402 | 0.070* | |
| C5 | 0.8329 (5) | 0.89612 (19) | 0.25971 (11) | 0.0612 (6) | |
| H5A | 0.6687 | 0.8995 | 0.2553 | 0.073* | |
| H5B | 0.8678 | 0.8707 | 0.3062 | 0.073* | |
| C6 | 0.9253 (4) | 0.81891 (16) | 0.20627 (10) | 0.0551 (6) | |
| H6A | 0.8718 | 0.7499 | 0.2194 | 0.066* | |
| H6B | 1.0896 | 0.8183 | 0.2108 | 0.066* | |
| C7 | 0.8694 (3) | 0.83462 (15) | 0.12864 (10) | 0.0413 (5) | |
| C8 | 0.9669 (3) | 0.93978 (13) | 0.09937 (9) | 0.0352 (4) | |
| H8 | 1.1210 | 0.9467 | 0.1183 | 0.042* | |
| C9 | 0.9916 (4) | 0.93761 (14) | 0.01895 (9) | 0.0439 (4) | |
| H9A | 1.1288 | 0.8996 | 0.0068 | 0.053* | |
| H9B | 0.8634 | 0.9003 | −0.0009 | 0.053* | |
| C10 | 1.0027 (4) | 1.04668 (16) | −0.01305 (10) | 0.0489 (5) | |
| H10 | 1.1151 | 1.0873 | 0.0133 | 0.059* | |
| C11 | 0.7729 (4) | 1.09873 (15) | −0.00364 (12) | 0.0528 (6) | |
| H11 | 0.6729 | 1.0760 | −0.0417 | 0.063* | |
| C12 | 0.6602 (4) | 1.06999 (15) | 0.06595 (11) | 0.0464 (5) | |
| H12A | 0.5728 | 1.1291 | 0.0830 | 0.056* | |
| H12B | 0.5567 | 1.0118 | 0.0590 | 0.056* | |
| C13 | 0.5996 (5) | 1.1233 (2) | 0.22183 (14) | 0.0690 (7) | |
| H13A | 0.6296 | 1.1599 | 0.2646 | 0.104* | |
| H13B | 0.4863 | 1.0706 | 0.2298 | 0.104* | |
| H13C | 0.5456 | 1.1719 | 0.1874 | 0.104* | |
| C14 | 0.6117 (4) | 0.82570 (18) | 0.11891 (13) | 0.0562 (6) | |
| H14A | 0.5752 | 0.8317 | 0.0702 | 0.084* | |
| H14B | 0.5375 | 0.8807 | 0.1443 | 0.084* | |
| H14C | 0.5607 | 0.7591 | 0.1361 | 0.084* | |
| C15 | 0.9811 (5) | 0.74201 (14) | 0.09077 (12) | 0.0563 (6) | |
| H15A | 0.9325 | 0.6777 | 0.1119 | 0.084* | |
| H15B | 1.1435 | 0.7478 | 0.0942 | 0.084* | |
| H15C | 0.9371 | 0.7426 | 0.0425 | 0.084* | |
| C16 | 1.0780 (6) | 1.0442 (2) | −0.08917 (12) | 0.0769 (8) | |
| H16A | 1.2321 | 1.0197 | −0.0919 | 0.115* | |
| H16B | 1.0686 | 1.1134 | −0.1085 | 0.115* | |
| H16C | 0.9807 | 0.9980 | −0.1150 | 0.115* | |
| O1 | 0.8089 (4) | 1.20972 (12) | −0.01013 (12) | 0.0789 (6) | |
| H1 | 0.6857 | 1.2396 | −0.0120 | 0.118* |
| C1 | 0.0310 (9) | 0.0379 (9) | 0.0454 (10) | −0.0016 (8) | −0.0027 (9) | −0.0033 (8) |
| C2 | 0.0448 (12) | 0.0457 (10) | 0.0625 (13) | −0.0076 (10) | −0.0022 (11) | −0.0117 (9) |
| C3 | 0.0404 (11) | 0.0495 (11) | 0.0502 (11) | −0.0040 (10) | 0.0018 (10) | −0.0143 (9) |
| C4 | 0.0555 (14) | 0.0780 (15) | 0.0419 (11) | −0.0040 (12) | −0.0058 (11) | −0.0128 (10) |
| C5 | 0.0680 (15) | 0.0762 (15) | 0.0394 (11) | −0.0016 (14) | 0.0003 (12) | 0.0067 (10) |
| C6 | 0.0609 (14) | 0.0566 (12) | 0.0478 (11) | 0.0041 (11) | −0.0034 (11) | 0.0126 (10) |
| C7 | 0.0406 (11) | 0.0402 (9) | 0.0431 (10) | −0.0007 (9) | −0.0014 (9) | 0.0032 (8) |
| C8 | 0.0285 (9) | 0.0394 (9) | 0.0378 (9) | −0.0005 (8) | −0.0029 (8) | 0.0002 (7) |
| C9 | 0.0476 (11) | 0.0420 (9) | 0.0419 (10) | 0.0026 (9) | 0.0028 (9) | −0.0010 (8) |
| C10 | 0.0540 (12) | 0.0490 (11) | 0.0435 (10) | −0.0043 (11) | −0.0007 (10) | 0.0056 (9) |
| C11 | 0.0549 (13) | 0.0448 (11) | 0.0586 (12) | −0.0005 (10) | −0.0141 (11) | 0.0099 (10) |
| C12 | 0.0375 (10) | 0.0416 (10) | 0.0603 (12) | 0.0045 (9) | −0.0077 (10) | 0.0004 (9) |
| C13 | 0.0592 (15) | 0.0730 (16) | 0.0748 (16) | 0.0046 (14) | 0.0130 (13) | −0.0234 (13) |
| C14 | 0.0478 (12) | 0.0572 (13) | 0.0635 (13) | −0.0135 (11) | −0.0021 (11) | 0.0105 (11) |
| C15 | 0.0687 (16) | 0.0371 (10) | 0.0632 (13) | 0.0014 (11) | 0.0020 (13) | 0.0016 (9) |
| C16 | 0.100 (2) | 0.0785 (16) | 0.0527 (13) | 0.0024 (17) | 0.0111 (15) | 0.0157 (12) |
| O1 | 0.0872 (13) | 0.0459 (8) | 0.1035 (14) | 0.0081 (9) | 0.0012 (13) | 0.0243 (9) |
| C1—C2 | 1.517 (3) | C9—H9A | 0.9700 |
| C1—C12 | 1.519 (3) | C9—H9B | 0.9700 |
| C1—C3 | 1.524 (3) | C10—C11 | 1.517 (3) |
| C1—C8 | 1.536 (2) | C10—C16 | 1.524 (3) |
| C2—C3 | 1.502 (3) | C10—H10 | 0.9800 |
| C2—H2A | 0.9700 | C11—O1 | 1.440 (2) |
| C2—H2B | 0.9700 | C11—C12 | 1.533 (3) |
| C3—C4 | 1.515 (3) | C11—H11 | 0.9800 |
| C3—C13 | 1.520 (3) | C12—H12A | 0.9700 |
| C4—C5 | 1.515 (3) | C12—H12B | 0.9700 |
| C4—H4A | 0.9700 | C13—H13A | 0.9600 |
| C4—H4B | 0.9700 | C13—H13B | 0.9600 |
| C5—C6 | 1.522 (3) | C13—H13C | 0.9600 |
| C5—H5A | 0.9700 | C14—H14A | 0.9600 |
| C5—H5B | 0.9700 | C14—H14B | 0.9600 |
| C6—C7 | 1.536 (3) | C14—H14C | 0.9600 |
| C6—H6A | 0.9700 | C15—H15A | 0.9600 |
| C6—H6B | 0.9700 | C15—H15B | 0.9600 |
| C7—C14 | 1.531 (3) | C15—H15C | 0.9600 |
| C7—C15 | 1.536 (3) | C16—H16A | 0.9600 |
| C7—C8 | 1.565 (2) | C16—H16B | 0.9600 |
| C8—C9 | 1.547 (2) | C16—H16C | 0.9600 |
| C8—H8 | 0.9800 | O1—H1 | 0.8200 |
| C9—C10 | 1.524 (3) | ||
| C2—C1—C12 | 113.73 (16) | C10—C9—H9A | 109.0 |
| C2—C1—C3 | 59.18 (13) | C8—C9—H9A | 109.0 |
| C12—C1—C3 | 121.59 (17) | C10—C9—H9B | 109.0 |
| C2—C1—C8 | 119.38 (16) | C8—C9—H9B | 109.0 |
| C12—C1—C8 | 112.19 (15) | H9A—C9—H9B | 107.8 |
| C3—C1—C8 | 120.51 (16) | C11—C10—C16 | 112.4 (2) |
| C3—C2—C1 | 60.63 (13) | C11—C10—C9 | 108.36 (18) |
| C3—C2—H2A | 117.7 | C16—C10—C9 | 112.22 (18) |
| C1—C2—H2A | 117.7 | C11—C10—H10 | 107.9 |
| C3—C2—H2B | 117.7 | C16—C10—H10 | 107.9 |
| C1—C2—H2B | 117.7 | C9—C10—H10 | 107.9 |
| H2A—C2—H2B | 114.8 | O1—C11—C10 | 106.89 (19) |
| C2—C3—C4 | 116.9 (2) | O1—C11—C12 | 112.0 (2) |
| C2—C3—C13 | 118.91 (19) | C10—C11—C12 | 112.53 (17) |
| C4—C3—C13 | 112.6 (2) | O1—C11—H11 | 108.4 |
| C2—C3—C1 | 60.18 (12) | C10—C11—H11 | 108.4 |
| C4—C3—C1 | 118.90 (17) | C12—C11—H11 | 108.4 |
| C13—C3—C1 | 119.91 (19) | C1—C12—C11 | 110.48 (17) |
| C3—C4—C5 | 115.3 (2) | C1—C12—H12A | 109.6 |
| C3—C4—H4A | 108.4 | C11—C12—H12A | 109.6 |
| C5—C4—H4A | 108.4 | C1—C12—H12B | 109.6 |
| C3—C4—H4B | 108.4 | C11—C12—H12B | 109.6 |
| C5—C4—H4B | 108.4 | H12A—C12—H12B | 108.1 |
| H4A—C4—H4B | 107.5 | C3—C13—H13A | 109.5 |
| C4—C5—C6 | 113.0 (2) | C3—C13—H13B | 109.5 |
| C4—C5—H5A | 109.0 | H13A—C13—H13B | 109.5 |
| C6—C5—H5A | 109.0 | C3—C13—H13C | 109.5 |
| C4—C5—H5B | 109.0 | H13A—C13—H13C | 109.5 |
| C6—C5—H5B | 109.0 | H13B—C13—H13C | 109.5 |
| H5A—C5—H5B | 107.8 | C7—C14—H14A | 109.5 |
| C5—C6—C7 | 119.33 (18) | C7—C14—H14B | 109.5 |
| C5—C6—H6A | 107.5 | H14A—C14—H14B | 109.5 |
| C7—C6—H6A | 107.5 | C7—C14—H14C | 109.5 |
| C5—C6—H6B | 107.5 | H14A—C14—H14C | 109.5 |
| C7—C6—H6B | 107.5 | H14B—C14—H14C | 109.5 |
| H6A—C6—H6B | 107.0 | C7—C15—H15A | 109.5 |
| C14—C7—C6 | 108.64 (19) | C7—C15—H15B | 109.5 |
| C14—C7—C15 | 108.0 (2) | H15A—C15—H15B | 109.5 |
| C6—C7—C15 | 105.37 (16) | C7—C15—H15C | 109.5 |
| C14—C7—C8 | 112.51 (17) | H15A—C15—H15C | 109.5 |
| C6—C7—C8 | 112.38 (16) | H15B—C15—H15C | 109.5 |
| C15—C7—C8 | 109.65 (16) | C10—C16—H16A | 109.5 |
| C1—C8—C9 | 108.22 (15) | C10—C16—H16B | 109.5 |
| C1—C8—C7 | 116.53 (15) | H16A—C16—H16B | 109.5 |
| C9—C8—C7 | 112.05 (14) | C10—C16—H16C | 109.5 |
| C1—C8—H8 | 106.5 | H16A—C16—H16C | 109.5 |
| C9—C8—H8 | 106.5 | H16B—C16—H16C | 109.5 |
| C7—C8—H8 | 106.5 | C11—O1—H1 | 109.5 |
| C10—C9—C8 | 112.81 (15) |
| H··· | ||||
| O1—H1···O1i | 0.82 | 2.35 | 3.139 (3) | 163 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯O1i | 0.82 | 2.35 | 3.139 (3) | 163 |
Symmetry code: (i) .