Literature DB >> 23132060

The collection of high-resolution electron diffraction data.

Tamir Gonen1.   

Abstract

A number of atomic-resolution structures of membrane proteins (better than 3Å resolution) have been determined recently by electron crystallography. While this technique was established more than 40 years ago, it is still in its infancy with regard to the two-dimensional (2D) crystallization, data collection, data analysis, and protein structure determination. In terms of data collection, electron crystallography encompasses both image acquisition and electron diffraction data collection. Other chapters in this volume outline protocols for image collection and analysis. This chapter, however, outlines detailed protocols for data collection by electron diffraction. These include microscope setup, electron diffraction data collection, and troubleshooting.

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Year:  2013        PMID: 23132060      PMCID: PMC3856639          DOI: 10.1007/978-1-62703-176-9_9

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  11 in total

1.  Three-dimensional model of purple membrane obtained by electron microscopy.

Authors:  R Henderson; P N Unwin
Journal:  Nature       Date:  1975-09-04       Impact factor: 49.962

2.  Improved specimen preparation for cryo-electron microscopy using a symmetric carbon sandwich technique.

Authors:  Nobuhiko Gyobu; Kazutoshi Tani; Yoko Hiroaki; Akiko Kamegawa; Kaoru Mitsuoka; Yoshinori Fujiyoshi
Journal:  J Struct Biol       Date:  2004-06       Impact factor: 2.867

Review 3.  The structural study of membrane proteins by electron crystallography.

Authors:  Y Fujiyoshi
Journal:  Adv Biophys       Date:  1998

4.  Lipid-protein interactions in double-layered two-dimensional AQP0 crystals.

Authors:  Tamir Gonen; Yifan Cheng; Piotr Sliz; Yoko Hiroaki; Yoshinori Fujiyoshi; Stephen C Harrison; Thomas Walz
Journal:  Nature       Date:  2005-12-01       Impact factor: 49.962

5.  Aquaporin-0 membrane junctions reveal the structure of a closed water pore.

Authors:  Tamir Gonen; Piotr Sliz; Joerg Kistler; Yifan Cheng; Thomas Walz
Journal:  Nature       Date:  2004-05-13       Impact factor: 49.962

6.  Crystal structure of human aquaporin 4 at 1.8 A and its mechanism of conductance.

Authors:  Joseph D Ho; Ronald Yeh; Andrew Sandstrom; Ilya Chorny; William E C Harries; Rebecca A Robbins; Larry J W Miercke; Robert M Stroud
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-21       Impact factor: 11.205

Review 7.  Electron crystallography of aquaporins.

Authors:  Simeon Andrews; Steve L Reichow; Tamir Gonen
Journal:  IUBMB Life       Date:  2008-07       Impact factor: 3.885

8.  Structure and gating mechanism of the acetylcholine receptor pore.

Authors:  Atsuo Miyazawa; Yoshinori Fujiyoshi; Nigel Unwin
Journal:  Nature       Date:  2003-06-26       Impact factor: 49.962

Review 9.  Lipid-protein interactions probed by electron crystallography.

Authors:  Steve L Reichow; Tamir Gonen
Journal:  Curr Opin Struct Biol       Date:  2009-08-11       Impact factor: 6.809

10.  The prototypical H+/galactose symporter GalP assembles into functional trimers.

Authors:  Hongjin Zheng; Justin Taraska; Alexey J Merz; Tamir Gonen
Journal:  J Mol Biol       Date:  2009-12-16       Impact factor: 5.469

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  10 in total

Review 1.  The cryo-EM method microcrystal electron diffraction (MicroED).

Authors:  Brent L Nannenga; Tamir Gonen
Journal:  Nat Methods       Date:  2019-04-29       Impact factor: 28.547

Review 2.  Taking the measure of MicroED.

Authors:  Jose A Rodriguez; David S Eisenberg; Tamir Gonen
Journal:  Curr Opin Struct Biol       Date:  2017-06-22       Impact factor: 6.809

Review 3.  Protein structure determination by MicroED.

Authors:  Brent L Nannenga; Tamir Gonen
Journal:  Curr Opin Struct Biol       Date:  2014-04-05       Impact factor: 6.809

Review 4.  MicroED opens a new era for biological structure determination.

Authors:  Brent L Nannenga; Tamir Gonen
Journal:  Curr Opin Struct Biol       Date:  2016-10-01       Impact factor: 6.809

5.  MicroED data collection and processing.

Authors:  Johan Hattne; Francis E Reyes; Brent L Nannenga; Dan Shi; M Jason de la Cruz; Andrew G W Leslie; Tamir Gonen
Journal:  Acta Crystallogr A Found Adv       Date:  2015-07-01       Impact factor: 2.290

6.  Three-dimensional electron crystallography of protein microcrystals.

Authors:  Dan Shi; Brent L Nannenga; Matthew G Iadanza; Tamir Gonen
Journal:  Elife       Date:  2013-11-19       Impact factor: 8.140

7.  MicroED: a versatile cryoEM method for structure determination.

Authors:  Brent L Nannenga; Tamir Gonen
Journal:  Emerg Top Life Sci       Date:  2018-02-06

8.  The collection of MicroED data for macromolecular crystallography.

Authors:  Dan Shi; Brent L Nannenga; M Jason de la Cruz; Jinyang Liu; Steven Sawtelle; Guillermo Calero; Francis E Reyes; Johan Hattne; Tamir Gonen
Journal:  Nat Protoc       Date:  2016-04-14       Impact factor: 13.491

9.  Structure of catalase determined by MicroED.

Authors:  Brent L Nannenga; Dan Shi; Johan Hattne; Francis E Reyes; Tamir Gonen
Journal:  Elife       Date:  2014-10-10       Impact factor: 8.140

10.  High-resolution structure determination by continuous-rotation data collection in MicroED.

Authors:  Brent L Nannenga; Dan Shi; Andrew G W Leslie; Tamir Gonen
Journal:  Nat Methods       Date:  2014-08-03       Impact factor: 28.547

  10 in total

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