Literature DB >> 9949765

The structural study of membrane proteins by electron crystallography.

Y Fujiyoshi1.   

Abstract

A high-resolution electron cryo-microscope equipped with a top-entry specimen stage has been refined by modifying a previously described superfluid helium stage. Instruments equipped with such a cryo-stage achieve a resolution of better than 2.0 A and have proved extremely powerful in the high-resolution structure analysis of membrane proteins. Improvement of the electron microscopic system in combination with improved specimen preparation techniques allowed the structure of bR to be analyzed to a resolution of 3.0 A. The 3D structure of bR, especially the surface features, revealed the structural basis for the efficient guidance of protons to the entrance of the transmembrane channel. Based on the characteristic difference of the atomic scattering factors for electrons of ionized atoms versus neutral atoms as well as the data analysis, charged and uncharged amino acid residues could be discriminated. Thus, electron crystallography is providing us with new and exciting insights into the structure of membrane proteins because it not only enables us to determine the structure of a membrane protein, but allows us to study its interaction with the surrounding lipid molecules and to determine its ionization state.

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Year:  1998        PMID: 9949765     DOI: 10.1016/s0065-227x(98)90004-1

Source DB:  PubMed          Journal:  Adv Biophys        ISSN: 0065-227X


  53 in total

1.  The three-dimensional map of microsomal glutathione transferase 1 at 6 A resolution.

Authors:  I Schmidt-Krey; K Mitsuoka; T Hirai; K Murata; Y Cheng; Y Fujiyoshi; R Morgenstern; H Hebert
Journal:  EMBO J       Date:  2000-12-01       Impact factor: 11.598

2.  Robert Feulgen Lecture. Microscopic assessment of membrane protein structure and function.

Authors:  Andreas Engel
Journal:  Histochem Cell Biol       Date:  2003-07-24       Impact factor: 4.304

3.  Internal structure and visualization of transmembrane domains of the RyR1 calcium release channel by cryo-EM.

Authors:  Montserrat Samsó; Terence Wagenknecht; P D Allen
Journal:  Nat Struct Mol Biol       Date:  2005-05-22       Impact factor: 15.369

4.  Inter-subunit interaction of gastric H+,K+-ATPase prevents reverse reaction of the transport cycle.

Authors:  Kazuhiro Abe; Kazutoshi Tani; Tomohiro Nishizawa; Yoshinori Fujiyoshi
Journal:  EMBO J       Date:  2009-04-23       Impact factor: 11.598

5.  Dodecamer rotor ring defines H+/ATP ratio for ATP synthesis of prokaryotic V-ATPase from Thermus thermophilus.

Authors:  Masashi Toei; Christoph Gerle; Masahiro Nakano; Kazutoshi Tani; Nobuhiko Gyobu; Masatada Tamakoshi; Nobuhito Sone; Masasuke Yoshida; Yoshinori Fujiyoshi; Kaoru Mitsuoka; Ken Yokoyama
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-11       Impact factor: 11.205

6.  High-resolution low-dose scanning transmission electron microscopy.

Authors:  James P Buban; Quentin Ramasse; Bryant Gipson; Nigel D Browning; Henning Stahlberg
Journal:  J Electron Microsc (Tokyo)       Date:  2009-11-14

7.  Cryo-EM structure of gastric H+,K+-ATPase with a single occupied cation-binding site.

Authors:  Kazuhiro Abe; Kazutoshi Tani; Thomas Friedrich; Yoshinori Fujiyoshi
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-22       Impact factor: 11.205

8.  Two-dimensional crystallization conditions of human leukotriene C4 synthase requiring adjustment of a particularly large combination of specific parameters.

Authors:  G Zhao; M C Johnson; J R Schnell; Y Kanaoka; W Haase; D Irikura; B K Lam; I Schmidt-Krey
Journal:  J Struct Biol       Date:  2009-11-10       Impact factor: 2.867

9.  Radiation damage effects at four specimen temperatures from 4 to 100 K.

Authors:  Benjamin E Bammes; Joanita Jakana; Michael F Schmid; Wah Chiu
Journal:  J Struct Biol       Date:  2009-11-10       Impact factor: 2.867

10.  Electron crystallography reveals the structure of metarhodopsin I.

Authors:  Jonathan J Ruprecht; Thorsten Mielke; Reiner Vogel; Claudio Villa; Gebhard F X Schertler
Journal:  EMBO J       Date:  2004-08-26       Impact factor: 11.598

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