Literature DB >> 22824462

Investigation of slow molecular dynamics using R-CODEX.

Wenbo Li1, Ann McDermott.   

Abstract

A solid state NMR experiment is introduced for probing motions on the millisecond time scale, based on dephasing and refocusing (1)H-(13)C or (1)H-(15)N dipolar couplings. The method is related to the previously described Centerband-Only Detection of Exchange or CODEX experiment. The use of an R-type dipolar recoupling sequence takes advantage of the strong (1)H-(13)C or (1)H-(15)N dipolar coupling, while suppressing the effect of (1)H-(1)H homonuclear coupling. This approach paves the way to detect both the correlation time and reorientational angle of the dynamics in fully protonated samples. The performance of this pulse sequence is demonstrated using imidazole methyl sulfonate.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22824462      PMCID: PMC3572235          DOI: 10.1016/j.jmr.2012.05.019

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  25 in total

1.  Measurement of site-specific 13C spin-lattice relaxation in a crystalline protein.

Authors:  Józef R Lewandowski; Julien Sein; Hans Jürgen Sass; Stephan Grzesiek; Martin Blackledge; Lyndon Emsley
Journal:  J Am Chem Soc       Date:  2010-06-23       Impact factor: 15.419

2.  Protein conformational flexibility from structure-free analysis of NMR dipolar couplings: quantitative and absolute determination of backbone motion in ubiquitin.

Authors:  Loïc Salmon; Guillaume Bouvignies; Phineus Markwick; Nils Lakomek; Scott Showalter; Da-Wei Li; Korvin Walter; Christian Griesinger; Rafael Brüschweiler; Martin Blackledge
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

3.  Characterization of slow conformational dynamics in solids: dipolar CODEX.

Authors:  Wenbo Li; Ann E McDermott
Journal:  J Biomol NMR       Date:  2009-08-07       Impact factor: 2.835

4.  Direct observation of millisecond to second motions in proteins by dipolar CODEX NMR spectroscopy.

Authors:  Alexey Krushelnitsky; Eduardo deAzevedo; Rasmus Linser; Bernd Reif; Kay Saalwächter; Detlef Reichert
Journal:  J Am Chem Soc       Date:  2009-09-02       Impact factor: 15.419

5.  Sensitivity enhancement and heteronuclear distance measurements in biological 17O solid-state NMR.

Authors:  Andreas Brinkmann; Arno P M Kentgens
Journal:  J Phys Chem B       Date:  2006-08-17       Impact factor: 2.991

6.  Methods for sequential resonance assignment in solid, uniformly 13C, 15N labelled peptides: quantification and application to antamanide.

Authors:  A Detken; E H Hardy; M Ernst; M Kainosho; T Kawakami; S Aimoto; B H Meier
Journal:  J Biomol NMR       Date:  2001-07       Impact factor: 2.835

7.  1H, 13C and 15N chemical shift referencing in biomolecular NMR.

Authors:  D S Wishart; C G Bigam; J Yao; F Abildgaard; H J Dyson; E Oldfield; J L Markley; B D Sykes
Journal:  J Biomol NMR       Date:  1995-09       Impact factor: 2.835

8.  Reorientation phenomena in imidazolium methyl sulfonate as probed by advanced solid-state NMR.

Authors:  Gillian R Goward; Kay Saalwächter; Ingrid Fischbach; Hans Wolfgang Spiess
Journal:  Solid State Nucl Magn Reson       Date:  2003 Sep-Nov       Impact factor: 2.293

9.  Signal loss in 1D magic-angle spinning exchange NMR (CODEX): radio-frequency limitations and intermediate motions.

Authors:  Christiane Hackel; Cornelius Franz; Anja Achilles; Kay Saalwächter; Detlef Reichert
Journal:  Phys Chem Chem Phys       Date:  2009-07-17       Impact factor: 3.676

10.  Dynamics of reassembled thioredoxin studied by magic angle spinning NMR: snapshots from different time scales.

Authors:  Jun Yang; Maria Luisa Tasayco; Tatyana Polenova
Journal:  J Am Chem Soc       Date:  2009-09-30       Impact factor: 15.419

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  4 in total

Review 1.  Structural biology of supramolecular assemblies by magic-angle spinning NMR spectroscopy.

Authors:  Caitlin M Quinn; Tatyana Polenova
Journal:  Q Rev Biophys       Date:  2017-01       Impact factor: 5.318

2.  Alamethicin Supramolecular Organization in Lipid Membranes from 19F Solid-State NMR.

Authors:  Evgeniy S Salnikov; Jesus Raya; Marta De Zotti; Ekaterina Zaitseva; Cristina Peggion; Gema Ballano; Claudio Toniolo; Jan Raap; Burkhard Bechinger
Journal:  Biophys J       Date:  2016-12-06       Impact factor: 4.033

Review 3.  Recent advances in solid-state nuclear magnetic resonance techniques to quantify biomolecular dynamics.

Authors:  Eric D Watt; Chad M Rienstra
Journal:  Anal Chem       Date:  2014-01-07       Impact factor: 6.986

Review 4.  Studying Dynamics by Magic-Angle Spinning Solid-State NMR Spectroscopy: Principles and Applications to Biomolecules.

Authors:  Paul Schanda; Matthias Ernst
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2016-02-15       Impact factor: 9.795

  4 in total

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